Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 1.3e-73 279.6 137 100.0
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 2.4e-48 195.7 131 77.1
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.2e-44 183.3 124 75.8
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.2e-44 183.3 124 75.8
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.1e-44 182.6 120 76.7
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.9e-44 180.6 124 74.2
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 1.0e-43 180.3 124 75.0
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 3.0e-43 178.7 134 67.2
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 6.7e-43 177.6 142 64.1
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 9.7e-42 173.7 117 76.1
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 1.7e-41 172.9 117 76.9
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 2.2e-41 172.6 141 61.0
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.7e-41 171.8 120 74.2
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 8.2e-41 170.6 161 55.9
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 1.1e-40 170.2 128 68.8
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 2.4e-40 169.1 137 62.0
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 3.1e-40 168.7 137 62.8
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 4.1e-40 168.3 144 59.0
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 5.3e-40 167.9 144 59.0
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 6.9e-40 167.5 141 59.6
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 9.1e-40 167.2 143 58.0
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 1.2e-39 166.8 144 58.3
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 1.2e-39 166.8 136 63.2
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 1.2e-39 166.8 127 64.6
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 2.0e-39 166.0 123 66.7
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 2.0e-39 166.0 129 62.8
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 2.6e-39 165.6 129 65.1
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 2.6e-39 165.6 133 63.9
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 3.4e-39 165.2 131 62.6
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 4.5e-39 164.9 126 63.5
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 4.5e-39 164.9 126 63.5
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 4.5e-39 164.9 133 62.4
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 4.5e-39 164.9 121 68.6
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 1.0e-38 163.7 133 61.7
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 1.0e-38 163.7 129 65.9
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 1.3e-38 163.3 138 63.0
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 1.3e-38 163.3 129 64.3
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 1.7e-38 162.9 138 60.9
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 2.2e-38 162.5 131 61.8
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 2.2e-38 162.5 124 66.1
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 2.9e-38 162.2 142 57.0
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 5.0e-38 161.4 131 61.8
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 6.5e-38 161.0 130 63.1
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 6.5e-38 161.0 121 66.1
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 8.5e-38 160.6 123 67.5
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 1.1e-37 160.2 130 60.8
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 1.1e-37 160.2 119 64.7
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 1.1e-37 160.2 141 54.6
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.4e-37 159.8 137 58.4
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 1.9e-37 159.5 123 67.5
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 2.5e-37 159.1 143 59.4
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 3.2e-37 158.7 139 59.7
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 4.2e-37 158.3 130 60.8
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 4.2e-37 158.3 119 64.7
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 4.2e-37 158.3 119 63.9
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 7.2e-37 157.5 148 54.1
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 9.4e-37 157.1 122 63.9
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 9.4e-37 157.1 121 64.5
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.6e-36 156.4 120 65.0
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 2.7e-36 155.6 119 62.2
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 2.7e-36 155.6 142 55.6
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 3.6e-36 155.2 120 67.5
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 6.1e-36 154.5 135 59.3
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 1.0e-35 153.7 137 59.1
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 1.0e-35 153.7 121 66.9
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 1.4e-35 153.3 151 58.3
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 3.9e-35 151.8 138 58.0
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 3.9e-35 151.8 137 57.7
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 3.9e-35 151.8 116 62.9
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 1.1e-34 150.2 128 60.2
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.1e-34 150.2 120 62.5
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 2.6e-34 149.1 123 61.0
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 3.3e-34 148.7 126 61.9
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 7.4e-34 147.5 123 61.0
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 7.4e-34 147.5 136 58.1
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 7.4e-34 147.5 134 59.7
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 9.7e-34 147.1 119 58.8
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 2.8e-33 145.6 128 57.0
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 2.8e-33 145.6 117 62.4
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 8.2e-33 144.1 129 60.5
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 1.4e-32 143.3 127 62.2
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 1.8e-32 142.9 115 61.7
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 3.1e-32 142.1 123 57.7
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 4.1e-32 141.7 117 60.7
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 4.1e-32 141.7 117 60.7
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 4.1e-32 141.7 129 59.7
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 5.3e-32 141.4 117 60.7
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 9.1e-32 140.6 126 56.3
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 2.0e-31 139.4 116 62.1
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 2.0e-31 139.4 115 61.7
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 2.0e-31 139.4 115 61.7
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 2.6e-31 139.0 117 59.0
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 3.5e-31 138.7 126 55.6
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 3.5e-31 138.7 117 61.5
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 5.9e-31 137.9 117 59.0
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 1.0e-30 137.1 117 58.1
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 1.0e-30 137.1 117 59.0
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.3e-30 136.7 124 56.5
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 6.5e-30 134.4 115 59.1
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 6.5e-30 134.4 125 55.2
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 2.1e-28 129.4 148 46.6
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 3.3e-26 122.1 139 49.6
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 7.4e-26 120.9 133 48.9
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 5.3e-24 114.8 121 52.1
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 3.5e-23 112.1 119 50.4
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 2.9e-22 109.0 138 44.2
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 5.0e-22 108.2 80 63.8
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 4.2e-21 105.1 76 65.8
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 2.8e-17 92.4 141 37.6
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.4e-16 90.1 49 77.6
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 7.7e-15 84.3 75 57.3
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 1.5e-13 80.1 60 65.0
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 4.2e-13 78.6 119 40.3
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 5.5e-13 78.2 80 58.8
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 1.7e-09 66.6 113 37.2


User provided reference genes

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