Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G282200 Prunus persica HOM05D008269 ORTHO05D010153 1.7e-57 226.1 140 100.0
RcHm_v2.0_Chr1g0375121 Rosa chinensis HOM05D008269 ORTHO05D010153 5.6e-29 131.3 142 55.6
FAN10G2987 Fragaria x ananassa HOM05D008269 ORTHO05D010153 6.2e-28 127.9 134 58.2
FvH4_7g28170 Fragaria vesca HOM05D008269 ORTHO05D010153 6.9e-27 124.4 143 58.0
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 4.3e-21 105.1 137 54.0
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 5.6e-21 104.8 137 53.3
FvH4_7g28161 Fragaria vesca HOM05D008269 ORTHO05D010153 1.1e-19 100.5 142 47.9
RcHm_v2.0_Chr1g0375111 Rosa chinensis HOM05D008269 ORTHO05D010153 1.1e-19 100.5 139 43.2
FAN03G2753 Fragaria x ananassa HOM05D008269 ORTHO05D010153 1.4e-19 100.1 126 55.6
QL02p008773 Quercus lobata HOM05D008269 ORTHO05D010153 2.4e-19 99.4 136 47.1
Prupe.2G282100 Prunus persica HOM05D008269 ORTHO05D010153 2.6e-18 95.9 151 43.7
Atru.chr1.635 Acer truncatum HOM05D008269 ORTHO05D010153 2.9e-17 92.4 137 53.3
Haze_17962 Corylus avellana HOM05D008269 ORTHO05D010153 2.9e-17 92.4 134 48.5
Atru.chr1.636 Acer truncatum HOM05D008269 ORTHO05D010153 1.1e-16 90.5 139 51.1
Cpa.g.sc3.272 Carica papaya HOM05D008269 ORTHO05D010153 3.2e-16 89.0 139 43.2
Cfa018156 Carpinus fangiana HOM05D008269 ORTHO05D010153 3.2e-16 89.0 137 49.6
Potri.015G131300 Populus trichocarpa HOM05D008269 ORTHO05D010153 5.5e-16 88.2 131 40.5
Phvul.004G127400 Phaseolus vulgaris HOM05D008269 ORTHO05D010153 7.1e-16 87.8 139 45.3
VMungo0464G1635 Vigna mungo HOM05D008269 ORTHO05D010153 7.1e-16 87.8 156 42.3
Manes.06G137900 Manihot esculenta HOM05D008269 ORTHO05D010153 1.2e-15 87.0 134 38.8
Rhsim03G0171400 Rhododendron simsii HOM05D008269 ORTHO05D010153 2.3e-14 82.8 140 41.4
Nn1g01219 Nelumbo nucifera HOM05D008269 ORTHO05D010153 5.1e-14 81.6 138 39.9
Thecc.03G161400 Theobroma cacao HOM05D008269 ORTHO05D010153 5.1e-14 81.6 132 42.4
FAN06G2146 Fragaria x ananassa HOM05D003921 ORTHO05D004394 8.7e-14 80.9 134 48.5
Manes.02G153600 Manihot esculenta HOM05D008269 ORTHO05D010153 1.5e-13 80.1 135 40.0
PGR047G0001 Punica granatum HOM05D008269 ORTHO05D010153 1.5e-13 80.1 130 40.0
Duzib084G0789 Durio zibethinus HOM05D008269 ORTHO05D010153 1.9e-13 79.7 129 41.1
CiPaw.04G062800 Carya illinoinensis HOM05D008269 ORTHO05D010153 2.5e-13 79.3 135 40.0
Migut.F00432 Erythranthe guttata HOM05D008269 ORTHO05D010153 2.5e-13 79.3 138 41.3
Potri.012G129400 Populus trichocarpa HOM05D008269 ORTHO05D010153 2.5e-13 79.3 139 44.6
Eucgr.K03334 Eucalyptus grandis HOM05D008269 ORTHO05D010153 4.3e-13 78.6 141 39.0
CANSAT21G0510 Cannabis sativa HOM05D008269 ORTHO05D010153 5.7e-13 78.2 146 37.7
Sabra12G0097300 Salix brachista HOM05D008269 ORTHO05D010153 1.3e-12 77.0 133 48.9
CiPaw.03G096800 Carya illinoinensis HOM05D008269 ORTHO05D010153 1.1e-11 73.9 131 38.9
Ciclev10006184m.g Citrus clementina HOM05D008269 ORTHO05D010153 1.4e-11 73.6 135 42.2
Nn4g26411 Nelumbo nucifera HOM05D008269 ORTHO05D010153 4.1e-11 72.0 139 47.5
TPR.G10665 Trifolium pratense HOM05D008269 ORTHO05D010153 6.9e-11 71.2 156 49.4
Eucgr.K03333 Eucalyptus grandis HOM05D008269 ORTHO05D010153 1.2e-10 70.5 140 39.3
Oeu022504.1 Olea europaea HOM05D008269 ORTHO05D010153 4.5e-10 68.6 130 38.5
Thecc.03G030800 Theobroma cacao HOM05D008269 ORTHO05D010153 1.0e-09 67.4 129 37.2
Nitab4.5_0002786g0070 Nicotiana tabacum HOM05D012743 ORTHO05D010153 1.7e-09 66.6 142 34.5
Eucgr.K03336 Eucalyptus grandis HOM05D008269 ORTHO05D010153 2.2e-09 66.2 127 39.4
Phvul.007G111700 Phaseolus vulgaris HOM05D008269 ORTHO05D010153 2.2e-09 66.2 137 36.5
Lalb_Chr19g0131321 Lupinus albus HOM05D008269 ORTHO05D010153 2.9e-09 65.9 150 49.3
Eucgr.K03335 Eucalyptus grandis HOM05D008269 ORTHO05D010153 6.5e-09 64.7 190 37.4
MELO3C005418.2 Cucumis melo HOM05D032672 ORTHO05D010153 1.4e-08 63.5 144 31.2
DCAR_018124 Daucus carota HOM05D008269 ORTHO05D010153 1.4e-08 63.5 133 34.6
Peaxi162Scf00032g00022 Petunia axillaris HOM05D012743 ORTHO05D017764 1.9e-08 63.2 164 32.3
Glyma.10G177800 Glycine max HOM05D008269 ORTHO05D010153 2.5e-08 62.8 138 35.5
Dinv28535 Davidia involucrata HOM05D008269 ORTHO05D010153 4.2e-08 62.0 109 35.8
Aqoxy7G00619 Aquilegia oxysepala HOM05D008269 ORTHO05D010153 7.2e-08 61.2 133 32.3
Glyma.20G212300 Glycine max HOM05D008269 ORTHO05D010153 7.2e-08 61.2 139 36.7
Psat1g109760 Pisum sativum HOM05D008269 ORTHO05D010153 1.6e-07 60.1 147 42.9
SalBow4G0749 Salvia bowleyana HOM05D008269 ORTHO05D010153 2.1e-07 59.7 123 45.5
FAN03G3435 Fragaria x ananassa HOM05D003921 ORTHO05D004394 4.6e-07 58.5 116 37.9
MSTRG.8421 Avicennia marina HOM05D008269 ORTHO05D010153 6.1e-07 58.2 133 35.3
Lsat_1_v5_gn_8_8201 Lactuca sativa HOM05D055346 ORTHO05D010153 7.9e-07 57.8 139 36.7
FAN10G0634 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.3e-06 57.0 116 37.1
Lalb_Chr03g0033111 Lupinus albus HOM05D008269 ORTHO05D010153 1.3e-06 57.0 141 35.5
FAN01G0440 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.8e-06 56.6 116 37.1
COL.COLO4_14179 Corchorus olitorius HOM05D003921 ORTHO05D004394 2.3e-06 56.2 132 31.1
Glyma.16G204500 Glycine max HOM05D008269 ORTHO05D010153 3.0e-06 55.8 146 40.4
Carub.0006s0609 Capsella rubella HOM05D023982 ORTHO05D010153 5.1e-06 55.1 154 31.2


User provided reference genes

Program Settings