Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 4.2e-261 904.0 423 100.0
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 1.6e-244 849.0 460 88.0
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 1.1e-242 842.8 461 87.2
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 3.3e-242 841.3 460 87.0
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 3.3e-242 841.3 461 87.4
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 4.4e-242 840.9 461 86.8
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 6.3e-241 837.0 461 86.6
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 7.7e-239 830.1 458 85.2
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 2.9e-238 828.2 423 88.9
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 1.1e-237 826.2 458 84.5
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 2.5e-237 825.1 458 84.9
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 3.6e-236 821.2 458 84.5
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 4.7e-236 820.8 460 84.1
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 4.7e-236 820.8 459 83.7
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.0e-235 819.7 458 84.1
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 3.0e-235 818.1 461 83.3
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 3.9e-235 817.8 459 82.8
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 3.9e-235 817.8 459 83.2
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 5.2e-235 817.4 459 83.7
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 6.7e-235 817.0 459 83.4
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 8.8e-235 816.6 475 80.6
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 5.7e-234 813.9 459 82.8
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.7e-233 812.4 459 83.7
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 2.2e-233 812.0 459 82.8
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 2.2e-233 812.0 459 83.4
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 1.1e-232 809.7 459 82.4
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 1.8e-232 808.9 460 82.8
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 4.1e-232 807.7 460 82.0
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 4.1e-232 807.7 459 82.4
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 7.0e-232 807.0 461 82.4
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 9.1e-232 806.6 459 80.4
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 2.0e-231 805.4 459 82.6
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 1.7e-230 802.4 459 82.8
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 8.5e-230 800.0 455 80.4
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.9e-229 798.9 460 81.5
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.9e-229 798.9 460 81.5
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 3.2e-229 798.1 459 80.0
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 7.2e-229 797.0 481 79.0
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 6.1e-228 793.9 455 80.2
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 8.0e-228 793.5 460 80.2
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 2.3e-227 792.0 460 79.8
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 4.0e-227 791.2 460 80.2
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 5.7e-226 787.3 460 80.0
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 1.7e-225 785.8 459 79.3
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 4.8e-225 784.3 459 79.7
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 8.2e-225 783.5 459 81.5
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 4.1e-224 781.2 459 78.4
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 2.7e-223 778.5 459 78.0
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 3.5e-223 778.1 460 78.5
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 2.2e-222 775.4 459 78.0
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 2.2e-222 775.4 459 78.0
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.1e-221 773.1 461 78.5
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 3.2e-221 771.5 460 78.0
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 9.4e-221 770.0 460 77.8
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 8.0e-220 766.9 460 77.6
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.0e-219 766.5 461 77.9
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 3.0e-219 765.0 460 76.7
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 1.2e-218 763.1 459 79.7
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 2.0e-218 762.3 458 77.3
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 3.7e-217 758.1 459 76.7
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 1.1e-216 756.5 459 77.1
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.2e-215 753.1 455 77.4
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 2.0e-215 752.3 459 76.0
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 3.5e-215 751.5 459 76.0
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 3.5e-215 751.5 459 76.3
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 2.3e-214 748.8 459 75.6
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 2.9e-214 748.4 460 75.7
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 3.8e-214 748.0 462 74.5
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 1.2e-212 743.0 459 75.4
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 8.0e-212 740.3 443 77.4
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 8.0e-212 740.3 460 75.7
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 1.8e-211 739.2 460 75.9
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.2e-210 736.5 460 74.8
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 5.7e-210 734.2 459 77.6
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 1.7e-209 732.6 486 71.2
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.7e-209 732.6 459 74.5
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 2.2e-209 732.3 458 74.0
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 2.8e-209 731.9 497 71.0
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 1.7e-201 706.1 460 73.7
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.1e-200 703.4 459 72.1
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 1.3e-198 696.4 464 69.6
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 3.1e-195 685.3 458 69.2
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 2.3e-187 659.1 496 64.3
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 7.8e-183 644.0 459 67.3
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 1.7e-177 626.3 458 67.5
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 6.6e-174 614.4 300 94.7
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 1.9e-173 612.8 393 73.0
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.3e-173 611.7 348 82.8
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 9.6e-173 610.5 300 93.3
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.1e-172 609.4 448 61.8
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.6e-172 608.6 443 62.3
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 3.1e-171 605.5 319 89.3
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.0e-171 605.1 300 93.0
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.5e-170 603.2 300 93.0
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 4.4e-170 601.7 300 93.3
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.2e-168 595.5 300 92.0
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.2e-168 595.5 300 92.0
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 2.7e-167 592.4 454 60.4
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.3e-161 573.5 456 58.6
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.1e-159 566.2 299 87.0
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 3.3e-157 558.9 299 86.6
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 2.1e-156 556.2 466 56.0
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 3.8e-153 545.4 301 84.1
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.1e-152 543.9 297 84.5
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.3e-148 530.4 297 83.8
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 1.3e-142 510.4 449 51.7
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 6.7e-142 508.1 277 82.3
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.7e-135 486.1 253 87.7
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 1.5e-133 480.3 297 76.8
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.0e-129 467.6 289 77.9
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 2.0e-125 453.4 308 64.6
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 6.5e-113 411.8 232 81.5
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 7.2e-96 355.1 449 39.0
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 9.8e-85 318.2 484 35.3
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.2e-59 233.0 110 96.4
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.2e-59 233.0 110 96.4
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 7.1e-59 232.3 122 82.0
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.2e-59 231.9 110 95.5
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 5.8e-53 212.6 185 57.8
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 2.3e-41 174.1 100 83.0
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 5.9e-13 79.7 40 87.5


User provided reference genes

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