Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 1.4e-30 135.6 64 100.0
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 2.3e-22 108.2 58 87.9
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 7.0e-19 96.7 58 75.9
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 1.0e-17 92.8 58 74.1
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 2.3e-17 91.7 58 72.4
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 5.0e-17 90.5 60 61.7
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 6.6e-17 90.1 60 61.7
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 1.9e-16 88.6 57 66.7
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 1.9e-16 88.6 57 73.7
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 1.9e-16 88.6 64 70.3
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 2.5e-16 88.2 56 71.4
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.5e-16 88.2 56 71.4
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.5e-16 88.2 56 71.4
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 3.3e-16 87.8 58 70.7
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 3.3e-16 87.8 56 69.6
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 9.5e-16 86.3 58 69.0
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 9.5e-16 86.3 59 67.8
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 2.8e-15 84.7 62 62.9
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 2.8e-15 84.7 62 62.9
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 3.6e-15 84.3 58 67.2
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 6.2e-15 83.6 60 58.3
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 1.0e-14 82.8 58 65.5
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 2.3e-14 81.6 60 63.3
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 3.1e-14 81.3 58 62.1
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 4.0e-14 80.9 58 65.5
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 6.8e-14 80.1 57 59.6
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 8.9e-14 79.7 58 58.6
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 1.2e-13 79.3 58 62.1
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 1.5e-13 79.0 58 63.8
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 5.8e-13 77.0 58 58.6
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 7.5e-13 76.6 58 58.6
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 1.3e-12 75.9 58 62.1
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 1.7e-12 75.5 58 60.3
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 2.2e-12 75.1 58 56.9
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 3.7e-12 74.3 57 56.1
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 4.9e-12 73.9 58 56.9
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 6.4e-12 73.6 58 60.3
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 6.4e-12 73.6 54 61.1
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 8.3e-12 73.2 60 55.0
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 8.3e-12 73.2 51 64.7
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 8.3e-12 73.2 58 53.4
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 1.1e-11 72.8 58 53.4
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 1.1e-11 72.8 52 63.5
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 1.4e-11 72.4 58 56.9
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 1.4e-11 72.4 59 54.2
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 1.4e-11 72.4 59 54.2
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 3.2e-11 71.2 58 55.2
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 3.2e-11 71.2 58 53.4
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 4.1e-11 70.9 58 55.2
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 4.1e-11 70.9 58 53.4
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 5.4e-11 70.5 58 53.4
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 9.2e-11 69.7 57 54.4
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 1.6e-10 68.9 58 56.9
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 1.6e-10 68.9 58 56.9
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.0e-10 68.6 58 53.4
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 2.0e-10 68.6 57 54.4
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 2.0e-10 68.6 56 57.1
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 2.0e-10 68.6 58 58.6
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 2.7e-10 68.2 60 50.0
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 3.5e-10 67.8 58 51.7
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 4.6e-10 67.4 58 48.3
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 4.6e-10 67.4 58 55.2
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 6.0e-10 67.0 57 52.6
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 6.0e-10 67.0 58 51.7
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 7.8e-10 66.6 57 52.6
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 1.0e-09 66.2 58 51.7
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 1.3e-09 65.9 58 51.7
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 3.0e-09 64.7 33 84.8
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 6.6e-09 63.5 58 50.0
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 8.6e-09 63.2 51 56.9
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 1.1e-08 62.8 59 49.2
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 1.5e-08 62.4 58 53.4
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 1.9e-08 62.0 57 54.4
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 1.9e-08 62.0 52 50.0
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 2.5e-08 61.6 61 47.5
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 7.3e-08 60.1 58 46.6
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 1.6e-07 58.9 52 46.2
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 1.6e-07 58.9 52 46.2
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 3.6e-07 57.8 51 47.1
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 3.6e-07 57.8 51 47.1
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 6.2e-07 57.0 58 44.8
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 2.3e-06 55.1 55 45.5
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 3.1e-06 54.7 51 45.1
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 3.1e-06 54.7 51 45.1
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 3.1e-06 54.7 51 45.1
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 4.0e-06 54.3 63 50.8


User provided reference genes

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