Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G262300 Prunus persica HOM05D006817 ORTHO05D008603 3.6e-64 248.1 122 100.0
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 1.4e-12 76.6 90 56.7
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 1.9e-12 76.3 90 53.3
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 1.9e-12 76.3 90 53.3
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 1.6e-11 73.2 90 54.4
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 2.1e-11 72.8 90 53.3
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 1.0e-10 70.5 92 51.1
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 1.0e-10 70.5 89 53.9
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 1.3e-10 70.1 90 52.2
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 2.3e-10 69.3 90 51.1
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 3.0e-10 68.9 89 52.8
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 3.0e-10 68.9 90 51.1
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 3.9e-10 68.6 90 51.1
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 5.1e-10 68.2 90 51.1
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 5.1e-10 68.2 90 50.0
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 8.7e-10 67.4 90 50.0
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 1.1e-09 67.0 90 51.1
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 1.9e-09 66.2 89 49.4
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 1.9e-09 66.2 90 47.8
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 2.5e-09 65.9 89 50.6
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.5e-09 65.9 49 75.5
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 3.3e-09 65.5 90 47.8
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 3.3e-09 65.5 106 41.5
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 4.3e-09 65.1 90 47.8
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 4.3e-09 65.1 106 42.5
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 4.3e-09 65.1 90 47.8
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 5.6e-09 64.7 90 47.8
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 5.6e-09 64.7 90 48.9
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 5.6e-09 64.7 113 43.4
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 7.4e-09 64.3 90 46.7
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 9.6e-09 63.9 90 48.9
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 9.6e-09 63.9 90 48.9
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 1.6e-08 63.2 89 48.3
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 1.6e-08 63.2 89 48.3
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 1.6e-08 63.2 90 50.0
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 2.8e-08 62.4 90 44.4
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 2.8e-08 62.4 113 41.6
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 2.8e-08 62.4 88 47.7
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 2.8e-08 62.4 90 46.7
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 2.8e-08 62.4 113 42.5
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 2.8e-08 62.4 89 50.6
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 3.7e-08 62.0 90 46.7
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 3.7e-08 62.0 104 43.3
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 4.8e-08 61.6 97 45.4
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 1.1e-07 60.5 90 44.4
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 1.1e-07 60.5 90 45.6
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 1.4e-07 60.1 113 41.6
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 1.8e-07 59.7 113 40.7
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 1.8e-07 59.7 113 40.7
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 2.4e-07 59.3 109 42.2
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 2.4e-07 59.3 109 42.2
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 3.1e-07 58.9 121 38.8
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 4.0e-07 58.5 50 66.0
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 5.3e-07 58.2 90 44.4
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 6.9e-07 57.8 104 41.3
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 6.9e-07 57.8 87 47.1
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 6.9e-07 57.8 105 40.0
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 6.9e-07 57.8 109 40.4
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 6.9e-07 57.8 72 51.4
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 9.0e-07 57.4 114 40.4
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 9.0e-07 57.4 90 43.3
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 1.2e-06 57.0 90 43.3
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 1.5e-06 56.6 89 46.1
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 2.0e-06 56.2 90 44.4
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 2.0e-06 56.2 113 38.9
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 3.4e-06 55.5 92 41.3
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 3.4e-06 55.5 90 42.2
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 3.4e-06 55.5 92 41.3
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 3.4e-06 55.5 92 41.3
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 3.4e-06 55.5 90 42.2
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 3.4e-06 55.5 89 42.7
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 3.4e-06 55.5 90 42.2
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 4.5e-06 55.1 113 38.1
QL08p064573 Quercus lobata HOM05D006817 ORTHO05D008603 5.8e-06 54.7 49 63.3
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 7.6e-06 54.3 90 40.0


User provided reference genes

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