Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 1.3e-274 949.1 503 100.0
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 5.7e-241 837.4 503 88.9
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 9.5e-204 713.8 505 77.2
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 2.8e-203 712.2 504 76.8
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 9.9e-201 703.7 505 76.2
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 7.1e-199 697.6 504 75.8
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 1.6e-198 696.4 500 74.8
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 6.0e-198 694.5 553 71.4
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 3.0e-197 692.2 502 73.7
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 1.2e-195 686.8 505 74.3
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 2.8e-195 685.6 506 73.3
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 1.5e-193 679.9 510 72.2
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 7.6e-193 677.6 505 72.1
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 3.8e-192 675.2 495 73.5
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 1.3e-189 666.8 514 72.0
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 5.1e-189 664.8 499 72.1
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 6.2e-187 657.9 498 70.7
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 1.1e-186 657.1 499 70.9
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 1.8e-186 656.4 504 72.0
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 1.8e-186 656.4 495 72.1
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 3.1e-186 655.6 498 70.7
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 4.0e-186 655.2 495 70.5
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 5.3e-186 654.8 502 69.7
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 6.9e-186 654.4 504 71.0
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 6.9e-186 654.4 504 70.8
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 1.2e-185 653.7 495 70.3
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 1.2e-185 653.7 507 71.0
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 1.5e-185 653.3 495 71.7
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 2.6e-185 652.5 502 70.9
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 5.8e-185 651.4 504 71.4
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 9.9e-185 650.6 507 70.6
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 1.7e-184 649.8 502 70.7
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 6.4e-184 647.9 485 73.2
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 1.9e-183 646.4 491 71.5
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 4.2e-183 645.2 502 70.9
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 4.2e-183 645.2 507 70.8
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 4.2e-183 645.2 459 78.6
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.7e-182 642.5 454 78.9
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 4.6e-182 641.7 496 70.4
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 4.6e-182 641.7 514 68.9
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 1.3e-181 640.2 499 68.5
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 2.3e-181 639.4 517 69.6
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 6.7e-181 637.9 498 70.9
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 3.3e-180 635.6 496 69.4
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 5.6e-180 634.8 499 69.7
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 3.7e-179 632.1 500 70.2
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 4.0e-178 628.6 507 68.8
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 1.2e-177 627.1 504 70.2
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 2.6e-177 625.9 439 78.4
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 9.9e-177 624.0 502 68.1
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 4.9e-176 621.7 506 68.0
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 3.9e-173 612.1 505 69.5
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 5.1e-173 611.7 496 67.9
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 5.1e-173 611.7 496 67.9
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 1.1e-172 610.5 495 65.9
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 2.5e-172 609.4 496 67.9
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 2.5e-172 609.4 439 77.2
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 1.3e-171 607.1 492 66.9
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 3.7e-171 605.5 508 64.6
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 1.1e-170 604.0 501 67.3
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 1.1e-170 604.0 501 65.7
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 1.8e-170 603.2 503 67.2
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 6.9e-170 601.3 568 62.0
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 2.0e-169 599.7 475 70.9
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 2.6e-169 599.4 527 63.6
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 1.0e-168 597.4 458 72.7
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 5.5e-167 591.7 498 64.7
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 1.2e-166 590.5 458 71.4
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 1.6e-166 590.1 503 65.2
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 7.9e-166 587.8 364 87.4
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 1.0e-165 587.4 510 64.7
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 2.8e-163 579.3 502 64.3
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 1.8e-162 576.6 506 64.0
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 1.8e-162 576.6 478 66.1
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 1.0e-160 570.9 492 63.0
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 3.6e-158 562.4 500 61.4
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 1.5e-156 557.0 495 61.2
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 2.5e-156 556.2 460 68.7
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 1.3e-155 553.9 410 72.9
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 2.4e-154 549.7 518 59.8
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 2.0e-148 530.0 524 58.6
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 7.4e-148 528.1 506 61.1
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 3.1e-146 522.7 411 71.3
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 2.0e-145 520.0 472 62.7
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 2.9e-144 516.2 502 60.6
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 2.5e-143 513.1 469 62.5
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 5.3e-130 468.8 357 70.3
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 2.3e-120 436.8 355 67.3
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 6.4e-107 392.1 258 83.3
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 3.0e-104 383.3 510 48.6
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 3.4e-100 369.8 328 63.1
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 3.7e-99 366.3 507 44.6
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 7.3e-95 352.1 290 67.2
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 8.3e-91 338.6 247 78.1
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 1.4e-90 337.8 368 53.8
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 1.6e-78 297.7 171 90.6
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 4.0e-77 293.1 231 68.0
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 5.8e-76 289.3 255 63.9
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 5.1e-64 249.6 160 82.5
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 5.1e-64 249.6 210 60.0
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 1.9e-63 247.7 211 64.9
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 9.9e-60 235.3 153 76.5
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 2.1e-57 227.6 168 73.2
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 3.3e-47 193.7 141 73.8
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 1.4e-45 188.3 154 63.0
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 1.2e-36 158.7 166 56.0
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 4.5e-36 156.8 95 88.4
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 6.5e-35 152.9 93 88.2
FvH4_7g25690 Fragaria vesca HOM05D006817 ORTHO05D008603 1.2e-33 148.7 90 83.3
Cre08.g361000 Chlamydomonas reinhardtii HOM05D006817 ORTHO05D008603 1.0e-32 145.6 489 28.8
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 1.0e-32 145.6 93 84.9
FAN06G4794 Fragaria x ananassa HOM05D006817 ORTHO05D008603 9.1e-29 132.5 77 85.7
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 6.1e-25 119.8 74 86.5
Hund15836 Selenicereus undatus HOM05D006817 ORTHO05D008603 5.7e-23 113.2 72 83.3
QL08p064573 Quercus lobata HOM05D006817 ORTHO05D008603 2.4e-21 107.8 68 77.9
Os11g0112900 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 4.1e-21 107.1 99 59.6
MD17G1183400 Malus domestica HOM05D006817 ORTHO05D008603 5.5e-18 96.7 57 89.5
FAN06G1140 Fragaria x ananassa HOM05D006817 ORTHO05D008603 3.6e-17 94.0 59 81.4
Prupe.2G262300 Prunus persica HOM05D006817 ORTHO05D008603 7.7e-12 76.3 90 56.7
PGSC0003DMG400024308 Solanum tuberosum HOM05D006817 ORTHO05D008603 1.2e-07 62.4 42 66.7


User provided reference genes

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