Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 4.0e-167 591.3 280 100.0
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 3.0e-138 495.4 280 83.9
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 1.6e-136 489.6 280 82.9
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 3.9e-122 441.8 287 74.2
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.5e-121 439.1 287 73.9
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 1.5e-118 429.9 285 71.2
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 1.7e-117 426.4 280 71.8
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 1.3e-114 416.8 278 71.2
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 1.6e-112 409.8 321 64.5
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 4.8e-112 408.3 287 69.7
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 8.1e-112 407.5 321 64.2
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 1.8e-111 406.4 286 68.9
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 1.5e-110 403.3 270 71.1
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 4.5e-110 401.7 282 69.5
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 7.6e-110 401.0 280 70.4
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.3e-109 400.2 287 69.3
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 1.3e-109 400.2 258 70.9
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 3.8e-109 398.7 282 68.8
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 1.1e-108 397.1 258 70.5
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 4.2e-108 395.2 276 69.2
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 9.3e-108 394.0 282 66.7
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 2.1e-107 392.9 253 71.1
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 1.5e-105 386.7 282 64.5
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 2.5e-105 386.0 253 69.2
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 4.3e-105 385.2 268 65.7
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 9.6e-105 384.0 282 64.2
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 9.6e-105 384.0 270 67.8
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 1.3e-104 383.6 253 69.2
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 1.3e-104 383.6 272 69.1
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 6.2e-104 381.3 277 65.0
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 8.2e-104 380.9 270 65.2
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 1.1e-103 380.6 256 69.1
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 1.8e-103 379.8 282 62.4
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 2.4e-103 379.4 278 62.9
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 2.4e-103 379.4 272 66.2
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 1.5e-102 376.7 254 70.1
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 1.1e-100 370.5 267 64.0
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 1.4e-100 370.2 277 63.9
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 2.7e-99 365.9 306 61.8
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 6.1e-99 364.8 255 65.9
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 1.0e-98 364.0 270 62.6
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 1.0e-98 364.0 333 57.7
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 1.8e-98 363.2 270 63.0
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 2.3e-98 362.8 268 66.0
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 5.1e-98 361.7 269 63.2
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 5.1e-98 361.7 271 63.1
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 4.3e-97 358.6 282 60.6
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 4.3e-97 358.6 283 60.8
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 9.7e-97 357.5 267 62.9
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 1.3e-96 357.1 266 63.9
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 8.2e-96 354.4 269 61.3
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 8.2e-96 354.4 341 54.5
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 8.2e-96 354.4 347 51.3
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 1.1e-95 354.0 268 64.6
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 1.4e-95 353.6 284 60.9
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 6.9e-95 351.3 271 64.2
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 9.0e-95 350.9 271 64.6
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 3.4e-94 349.0 275 60.7
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 5.9e-94 348.2 313 53.4
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 7.7e-94 347.8 273 61.2
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 7.7e-94 347.8 273 60.8
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 5.0e-93 345.1 270 60.7
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 8.5e-93 344.4 269 59.1
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 8.5e-93 344.4 273 60.4
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 5.5e-92 341.7 274 59.5
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 5.5e-92 341.7 222 74.8
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 4.6e-91 338.6 293 59.4
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 7.9e-91 337.8 250 64.4
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 1.0e-90 337.4 271 58.7
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 2.3e-90 336.3 259 61.4
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 3.9e-90 335.5 262 60.3
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 1.1e-89 334.0 245 62.4
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 2.5e-89 332.8 272 58.5
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 4.3e-89 332.0 203 77.8
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 6.3e-88 328.2 271 57.2
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 5.3e-87 325.1 258 58.5
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 2.6e-86 322.8 272 55.9
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 3.4e-86 322.4 270 55.9
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 4.7e-83 312.0 304 50.0
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 2.3e-82 309.7 252 57.5
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 3.9e-82 308.9 273 58.6
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 2.6e-81 306.2 208 70.2
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 2.6e-81 306.2 236 59.3
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.3e-80 303.9 208 71.2
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 1.3e-80 303.9 254 56.3
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 2.2e-80 303.1 203 69.0
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 3.7e-80 302.4 230 61.7
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 2.4e-79 299.7 268 52.6
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 3.1e-79 299.3 264 56.4
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 2.0e-78 296.6 207 70.0
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 2.6e-78 296.2 220 63.6
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 2.9e-77 292.7 220 63.2
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 4.7e-75 285.4 194 70.6
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 5.2e-74 282.0 203 66.5
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 1.1e-73 280.8 283 50.9
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 1.1e-73 280.8 330 47.0
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.5e-73 280.4 201 64.2
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 4.4e-73 278.9 201 63.7
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 1.1e-71 274.2 211 60.7
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 1.0e-66 257.7 189 68.3
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 4.5e-62 242.3 183 63.4
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 5.5e-60 235.3 224 52.2
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 4.7e-59 232.3 181 58.0
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 6.1e-59 231.9 351 38.5
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 2.3e-53 213.4 260 41.2
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 1.6e-51 207.2 205 50.7
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 1.2e-49 201.1 140 70.0
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 2.2e-48 196.8 240 41.2
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 2.7e-46 189.9 254 38.2
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 6.6e-45 185.3 173 54.3
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 1.2e-35 154.5 187 38.5
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 2.6e-33 146.7 167 45.5
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 9.8e-33 144.8 125 55.2
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 1.1e-28 131.3 152 50.0
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 2.5e-28 130.2 180 39.4
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 9.2e-23 111.7 93 63.4
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 5.1e-21 105.9 249 30.5
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 1.9e-15 87.4 165 32.7
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 3.1e-10 70.1 47 66.0
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 4.0e-10 69.7 73 50.7
Lsat_1_v5_gn_5_133280 Lactuca sativa HOM05D005717 ORTHO05D007221 9.3e-07 58.5 75 42.7


User provided reference genes

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