Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G254400 Prunus persica HOM05D005469 ORTHO05D001701 2.6e-49 198.4 96 100.0
FvH4_7g24940 Fragaria vesca HOM05D005469 ORTHO05D001701 8.6e-29 130.2 93 69.9
FAN06G3559 Fragaria x ananassa HOM05D005469 ORTHO05D001701 8.6e-29 130.2 93 69.9
MD01G1156800 Malus domestica HOM05D005469 ORTHO05D001701 1.5e-28 129.4 92 69.6
FAN10G1213 Fragaria x ananassa HOM05D005469 ORTHO05D001701 3.3e-28 128.3 93 68.8
CANSAT56G3078 Cannabis sativa HOM05D005469 ORTHO05D001701 7.3e-28 127.1 92 67.4
CANSAT56G4151 Cannabis sativa HOM05D005469 ORTHO05D001701 7.3e-28 127.1 92 67.4
RcHm_v2.0_Chr1g0370811 Rosa chinensis HOM05D005469 ORTHO05D001701 2.8e-27 125.2 93 66.7
Manes.10G009700 Manihot esculenta HOM05D005469 ORTHO05D001701 8.0e-27 123.6 92 66.3
TWI73G0354 Tripterygium wilfordii HOM05D005469 ORTHO05D001701 1.8e-26 122.5 93 64.5
Ciclev10033597m.g Citrus clementina HOM05D005469 ORTHO05D001701 5.2e-26 120.9 92 66.3
MD07G1225500 Malus domestica HOM05D005469 ORTHO05D001701 5.2e-26 120.9 92 66.3
GSVIVG01032773001 Vitis vinifera HOM05D005469 ORTHO05D001701 5.2e-26 120.9 92 67.4
Cfa001290 Carpinus fangiana HOM05D005469 ORTHO05D001701 7.5e-25 117.1 88 64.8
Haze_17260 Corylus avellana HOM05D005469 ORTHO05D001701 1.7e-24 115.9 88 63.6
Manes.07G132700 Manihot esculenta HOM05D005469 ORTHO05D001701 1.7e-24 115.9 79 68.4
Potri.010G185400 Populus trichocarpa HOM05D005469 ORTHO05D001701 4.9e-24 114.4 93 65.6
Thecc.10G012300 Theobroma cacao HOM05D005469 ORTHO05D001701 1.1e-23 113.2 92 65.2
Potri.008G072000 Populus trichocarpa HOM05D005469 ORTHO05D001701 1.4e-23 112.8 93 64.5
Dinv21761 Davidia involucrata HOM05D005469 ORTHO05D001701 4.1e-23 111.3 92 60.9
COL.COLO4_15412 Corchorus olitorius HOM05D005469 ORTHO05D001701 9.2e-23 110.2 85 63.5
Duzib106G0906 Durio zibethinus HOM05D005469 ORTHO05D001701 9.2e-23 110.2 92 63.0
Sabra10G0142600 Salix brachista HOM05D005469 ORTHO05D001701 9.2e-23 110.2 93 62.4
Cfa001288 Carpinus fangiana HOM05D005469 ORTHO05D001701 1.2e-22 109.8 89 61.8
Duzib128G1408 Durio zibethinus HOM05D005469 ORTHO05D001701 1.2e-22 109.8 92 64.1
Duzib114G0491 Durio zibethinus HOM05D005469 ORTHO05D001701 2.1e-22 109.0 90 63.3
Atru.chr12.80 Acer truncatum HOM05D005469 ORTHO05D001701 2.7e-22 108.6 93 58.1
HanXRQChr14g0459401 Helianthus annuus HOM05D005469 ORTHO05D001701 3.5e-22 108.2 91 58.2
LjContig00357g0002708 Lotus japonicus HOM05D005469 ORTHO05D001701 4.6e-22 107.8 92 59.8
QL08p063579 Quercus lobata HOM05D005469 ORTHO05D001701 4.6e-22 107.8 92 57.6
ECA238G2582 Erigeron canadensis HOM05D005469 ORTHO05D001701 7.8e-22 107.1 91 57.1
TAR623G0989 Trochodendron aralioides HOM05D005469 ORTHO05D001701 1.0e-21 106.7 92 59.8
Haze_17261 Corylus avellana HOM05D005469 ORTHO05D001701 1.3e-21 106.3 89 59.6
Lj1C959T17 Lonicera japonica HOM05D005469 ORTHO05D001701 1.7e-21 105.9 90 58.9
PGSC0003DMG400030033 Solanum tuberosum HOM05D005469 ORTHO05D001701 3.0e-21 105.1 91 58.2
CSS0028429 Camellia sinensis var. sinensis HOM05D005469 ORTHO05D001701 3.9e-21 104.8 91 58.2
Sabra08G0053200 Salix brachista HOM05D005469 ORTHO05D001701 3.9e-21 104.8 92 58.7
Aqoxy1G01324 Aquilegia oxysepala HOM05D005469 ORTHO05D001701 5.1e-21 104.4 97 56.7
CiPaw.02G194900 Carya illinoinensis HOM05D005469 ORTHO05D001701 5.1e-21 104.4 92 56.5
Lalb_Chr11g0075051 Lupinus albus HOM05D005469 ORTHO05D001701 6.6e-21 104.0 91 59.3
Cc02_g06130 Coffea canephora HOM05D005469 ORTHO05D001701 1.1e-20 103.2 91 53.8
TAR633G0722 Trochodendron aralioides HOM05D005469 ORTHO05D001701 1.1e-20 103.2 92 56.5
Nitab4.5_0000058g0190 Nicotiana tabacum HOM05D005469 ORTHO05D001701 1.5e-20 102.8 91 58.2
Gohir.A10G238750 Gossypium hirsutum HOM05D005469 ORTHO05D001701 1.9e-20 102.4 91 59.3
Sopen06g016860 Solanum pennellii HOM05D005469 ORTHO05D001701 1.9e-20 102.4 92 60.9
Ca_15147_v3 Cicer arietinum L. HOM05D005469 ORTHO05D001701 2.5e-20 102.1 91 57.1
Nitab4.5_0000666g0120 Nicotiana tabacum HOM05D005469 ORTHO05D001701 3.3e-20 101.7 91 57.1
Gohir.D10G250700 Gossypium hirsutum HOM05D005469 ORTHO05D001701 4.3e-20 101.3 79 60.8
Gorai.011G291100 Gossypium raimondii HOM05D005469 ORTHO05D001701 4.3e-20 101.3 79 60.8
CAN.G19.12 Capsicum annuum HOM05D005469 ORTHO05D001701 5.6e-20 100.9 91 56.0
Psat5g130360 Pisum sativum HOM05D005469 ORTHO05D001701 1.2e-19 99.8 91 54.9
Glyma.11G232100 Glycine max HOM05D005469 ORTHO05D001701 1.6e-19 99.4 87 54.0
HanXRQChr07g0203111 Helianthus annuus HOM05D005469 ORTHO05D001701 1.6e-19 99.4 91 58.2
ECA238G1751 Erigeron canadensis HOM05D005469 ORTHO05D001701 2.8e-19 98.6 91 53.8
FAN01G2364 Fragaria x ananassa HOM05D005469 ORTHO05D001701 2.8e-19 98.6 93 58.1
Nitab4.5_0003391g0070 Nicotiana tabacum HOM05D000087 ORTHO05D000793 3.6e-19 98.2 87 51.7
SalBow3G1256 Salvia bowleyana HOM05D005469 ORTHO05D001701 3.6e-19 98.2 91 49.5
VMungo1383G2982 Vigna mungo HOM05D005469 ORTHO05D001701 3.6e-19 98.2 82 56.1
Glyma.18G025200 Glycine max HOM05D005469 ORTHO05D001701 4.7e-19 97.8 83 55.4
Sc10g0002540 Simmondsia chinensis HOM05D005469 ORTHO05D001701 6.2e-19 97.4 94 52.1
Lalb_Chr08g0231561 Lupinus albus HOM05D005469 ORTHO05D001701 1.1e-18 96.7 91 56.0
Hma1.2p1_3227F.1_g334240 Hydrangea macrophylla HOM05D005469 ORTHO05D001701 1.4e-18 96.3 91 54.9
Lj6g0021216 Lotus japonicus HOM05D005469 ORTHO05D001701 1.8e-18 95.9 82 57.3
TPR.G30151 Trifolium pratense HOM05D005469 ORTHO05D001701 1.8e-18 95.9 83 56.6
MBI15_g40303_MAGBIO Magnolia biondii HOM05D005469 ORTHO05D001701 4.0e-18 94.7 91 50.5
Lsat_1_v5_gn_2_124301 Lactuca sativa HOM05D005469 ORTHO05D001701 8.9e-18 93.6 91 53.8
Thhalv10014798m.g Eutrema salsugineum HOM05D005469 ORTHO05D001701 1.2e-17 93.2 83 51.8
SGA_v2.0_scaffold44G16665 Striga asiatica HOM05D005469 ORTHO05D001701 1.5e-17 92.8 91 50.5
CAN.G1268.13 Capsicum annuum HOM05D005469 ORTHO05D001701 2.0e-17 92.4 93 51.6
Cpa.g.sc19.144 Carica papaya HOM05D005469 ORTHO05D001701 2.0e-17 92.4 92 53.3
RcHm_v2.0_Chr1g0370791 Rosa chinensis HOM05D005469 ORTHO05D001701 3.4e-17 91.7 90 56.7
Eucgr.G03079 Eucalyptus grandis HOM05D005469 ORTHO05D001701 4.4e-17 91.3 91 48.4
Nitab4.5_0000789g0080 Nicotiana tabacum HOM05D005469 ORTHO05D001701 4.4e-17 91.3 63 61.9
RcHm_v2.0_Chr1g0370801 Rosa chinensis HOM05D005469 ORTHO05D001701 4.4e-17 91.3 90 58.9
C09p71260 Brassica napus HOM05D005469 ORTHO05D001701 5.8e-17 90.9 85 49.4
BolC9t59887H Brassica oleracea HOM05D005469 ORTHO05D001701 5.8e-17 90.9 85 49.4
THA.LOC104826842 Tarenaya hassleriana HOM05D005469 ORTHO05D001701 5.8e-17 90.9 82 51.2
Ah.10g036310 Amaranthus hybridus HOM05D005469 ORTHO05D001701 7.6e-17 90.5 99 48.5
A10p30770 Brassica napus HOM05D005469 ORTHO05D001701 7.6e-17 90.5 85 50.6
BraA10t45118Z Brassica rapa HOM05D005469 ORTHO05D001701 7.6e-17 90.5 84 50.0
CARHR207770 Cardamine hirsuta HOM05D005469 ORTHO05D001701 7.6e-17 90.5 88 51.1
DCAR_024812 Daucus carota HOM05D005469 ORTHO05D001701 7.6e-17 90.5 85 50.6
Medtr3g071470 Medicago truncatula HOM05D005469 ORTHO05D001701 9.9e-17 90.1 59 66.1
Phvul.001G245200 Phaseolus vulgaris HOM05D005469 ORTHO05D001701 9.9e-17 90.1 82 51.2
Gohir.A10G238801 Gossypium hirsutum HOM05D005469 ORTHO05D001701 1.3e-16 89.7 81 58.0
BraA02t04851Z Brassica rapa HOM05D005469 ORTHO05D001701 1.7e-16 89.4 57 64.9
PSO801G0522 Papaver somniferum HOM05D005469 ORTHO05D001701 2.2e-16 89.0 93 47.3
BcaC06g32261 Brassica carinata HOM05D005469 ORTHO05D001701 2.9e-16 88.6 85 49.4
PSO339G0551 Papaver somniferum HOM05D005469 ORTHO05D001701 2.9e-16 88.6 93 49.5
Sopen05g031040 Solanum pennellii HOM05D005469 ORTHO05D001701 2.9e-16 88.6 87 48.3
Aa31LG11G6570 Aethionema arabicum HOM05D005469 ORTHO05D001701 3.7e-16 88.2 87 50.6
BolC2t06202H Brassica oleracea HOM05D005469 ORTHO05D001701 3.7e-16 88.2 84 50.0
EL10Ac2g04878 Beta vulgaris HOM05D005469 ORTHO05D001701 4.9e-16 87.8 97 44.3
BcaB05g21713 Brassica carinata HOM05D005469 ORTHO05D001701 4.9e-16 87.8 85 47.1
C02p02370 Brassica napus HOM05D005469 ORTHO05D001701 4.9e-16 87.8 84 48.8
Carub.0006s0440 Capsella rubella HOM05D005469 ORTHO05D001701 6.4e-16 87.4 96 46.9
AT5G05500 Arabidopsis thaliana HOM05D005469 ORTHO05D001701 1.1e-15 86.7 96 46.9
arahy.Tifrunner.gnm1.ann1.JSQZ9G Arachis hypogaea HOM05D005469 ORTHO05D001701 1.1e-15 86.7 88 51.1
AL6G15390 Arabidopsis lyrata HOM05D005469 ORTHO05D001701 1.4e-15 86.3 57 59.6
arahy.Tifrunner.gnm1.ann1.NV82FA Arachis hypogaea HOM05D005469 ORTHO05D001701 1.4e-15 86.3 88 51.1
BcaC06g32262 Brassica carinata HOM05D005469 ORTHO05D001701 1.4e-15 86.3 57 61.4
Sp6g37350 Schrenkiella parvula HOM05D005469 ORTHO05D001701 1.4e-15 86.3 83 48.2
THA.LOC104816535 Tarenaya hassleriana HOM05D005469 ORTHO05D001701 1.4e-15 86.3 90 50.0
PSO017G6429 Papaver somniferum HOM05D005469 ORTHO05D001701 1.9e-15 85.9 68 55.9
COL.COLO4_25530 Corchorus olitorius HOM05D005469 ORTHO05D001701 2.4e-15 85.5 91 50.5
Peaxi162Scf00045g02525 Petunia axillaris HOM05D000087 ORTHO05D000793 2.4e-15 85.5 53 64.2
Solyc05g052500.4 Solanum lycopersicum HOM05D000087 ORTHO05D000793 4.1e-15 84.7 87 47.1
Lj8C63T7 Lonicera japonica HOM05D005469 ORTHO05D001701 5.4e-15 84.3 82 52.4
Sed0020461 Sechium edule HOM05D005469 ORTHO05D001701 5.4e-15 84.3 91 47.3
MELO3C018370.2 Cucumis melo HOM05D005469 ORTHO05D001701 7.1e-15 84.0 91 46.2
FAN01G2198 Fragaria x ananassa HOM05D005469 ORTHO05D001701 7.1e-15 84.0 88 50.0
PSO349G0001 Papaver somniferum HOM05D005469 ORTHO05D001701 9.2e-15 83.6 70 55.7
PGR142G1835 Punica granatum HOM05D005469 ORTHO05D001701 9.2e-15 83.6 91 48.4
MBI03_g21447_MAGBIO Magnolia biondii HOM05D005469 ORTHO05D001701 1.6e-14 82.8 92 48.9
ClCG07G004420 Citrullus lanatus HOM05D005469 ORTHO05D001701 2.7e-14 82.0 89 47.2
CsaV3_5G010340 Cucumis sativus L. HOM05D005469 ORTHO05D001701 2.7e-14 82.0 55 56.4
Migut.F00654 Erythranthe guttata HOM05D005469 ORTHO05D001701 3.5e-14 81.6 90 47.8
MBI03_g43893_MAGBIO Magnolia biondii HOM05D005469 ORTHO05D001701 3.5e-14 81.6 59 59.3
Medtr5g014340 Medicago truncatula HOM05D005469 ORTHO05D001701 4.6e-14 81.3 60 61.7
FvH4_7g24910 Fragaria vesca HOM05D005469 ORTHO05D001701 6.0e-14 80.9 88 48.9
AUR62022927 Chenopodium quinoa HOM05D005469 ORTHO05D001701 1.3e-13 79.7 97 43.3
AUR62012286 Chenopodium quinoa HOM05D005469 ORTHO05D001701 5.1e-13 77.8 97 42.3
HPP92_018099 Vanilla planifolia HOM05D005469 ORTHO05D001701 1.1e-12 76.6 83 41.0
PGSC0003DMG400027122 Solanum tuberosum HOM05D005469 ORTHO05D001701 3.3e-12 75.1 46 65.2
Lsat_1_v5_gn_2_124321 Lactuca sativa HOM05D005469 ORTHO05D001701 5.6e-12 74.3 102 42.2
MBI03_g21448_MAGBIO Magnolia biondii HOM05D005469 ORTHO05D001701 7.3e-12 73.9 54 55.6
ATR0174G015 Amborella trichopoda HOM05D005469 ORTHO05D001701 2.6e-09 65.5 87 40.2
DCAR_011836 Daucus carota HOM05D005469 ORTHO05D001701 2.2e-08 62.4 88 38.6
Os01g0164300 Oryza sativa ssp. japonica HOM05D005469 ORTHO05D001701 4.9e-08 61.2 58 41.4
Os01g0164075 Oryza sativa ssp. japonica HOM05D005469 ORTHO05D001701 9.3e-07 57.0 54 48.1


User provided reference genes

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