Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G251100 Prunus persica HOM05D005616 ORTHO05D006975 5.1e-159 564.3 277 100.0
MD07G1223000 Malus domestica HOM05D005616 ORTHO05D006975 1.2e-136 490.0 277 87.0
RcHm_v2.0_Chr1g0370411 Rosa chinensis HOM05D005616 ORTHO05D006975 1.2e-128 463.4 277 83.4
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 6.8e-127 457.6 275 82.2
FAN07G0068 Fragaria x ananassa HOM05D005616 ORTHO05D006975 1.5e-126 456.4 278 81.3
FAN03G0254 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.6e-126 455.7 278 81.3
FvH4_7g24571 Fragaria vesca HOM05D005616 ORTHO05D006975 5.7e-126 454.5 278 82.7
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 6.4e-125 451.1 275 82.9
FvH4_4g21980 Fragaria vesca HOM05D005616 ORTHO05D006975 7.0e-124 447.6 278 81.3
Haze_17234 Corylus avellana HOM05D005616 ORTHO05D006975 1.5e-118 429.9 277 76.2
FAN12G0831 Fragaria x ananassa HOM05D005616 ORTHO05D006975 9.8e-118 427.2 305 73.1
FAN10G3671 Fragaria x ananassa HOM05D005616 ORTHO05D006975 4.1e-116 421.8 260 81.2
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 2.2e-109 399.4 277 70.4
Manes.10G011400 Manihot esculenta HOM05D005616 ORTHO05D006975 2.3e-106 389.4 277 69.7
Dinv10614 Davidia involucrata HOM05D005616 ORTHO05D006975 1.5e-105 386.7 277 67.5
Medtr3g070890 Medicago truncatula HOM05D005616 ORTHO05D006975 1.9e-105 386.3 277 69.0
Lalb_Chr08g0231681 Lupinus albus HOM05D005616 ORTHO05D006975 2.5e-105 386.0 277 68.2
TPR.G11210 Trifolium pratense HOM05D005616 ORTHO05D006975 3.3e-105 385.6 277 69.0
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 5.6e-105 384.8 277 68.6
Ciclev10032361m.g Citrus clementina HOM05D005616 ORTHO05D006975 9.5e-105 384.0 279 68.8
Medtr3g449480 Medicago truncatula HOM05D005616 ORTHO05D006975 2.8e-104 382.5 273 69.6
Sed0025730 Sechium edule HOM05D005616 ORTHO05D006975 1.1e-103 380.6 277 68.2
CsaV3_5G010220 Cucumis sativus L. HOM05D005616 ORTHO05D006975 1.4e-103 380.2 277 68.2
Lj1g0010131 Lotus japonicus HOM05D005616 ORTHO05D006975 2.3e-103 379.4 277 68.2
CANSAT78G1638 Cannabis sativa HOM05D005616 ORTHO05D006975 3.4e-102 375.6 256 70.7
ClCG07G004280 Citrullus lanatus HOM05D005616 ORTHO05D006975 3.4e-102 375.6 274 68.6
Glyma.11G230900 Glycine max HOM05D005616 ORTHO05D006975 4.4e-102 375.2 277 67.1
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 1.3e-101 373.6 277 66.4
Glyma.18G026400 Glycine max HOM05D005616 ORTHO05D006975 2.2e-101 372.9 274 67.2
Gohir.A04G093400 Gossypium hirsutum HOM05D005616 ORTHO05D006975 3.7e-101 372.1 278 66.9
Lj6g0010776 Lotus japonicus HOM05D005616 ORTHO05D006975 4.9e-101 371.7 277 67.1
Psat5g129880 Pisum sativum HOM05D005616 ORTHO05D006975 6.4e-101 371.3 277 66.8
Gorai.012G116600 Gossypium raimondii HOM05D005616 ORTHO05D006975 1.1e-100 370.5 274 67.2
TWI09G1208 Tripterygium wilfordii HOM05D005616 ORTHO05D006975 3.2e-100 369.0 277 66.8
CiPaw.02G193000 Carya illinoinensis HOM05D005616 ORTHO05D006975 1.2e-99 367.1 255 70.6
MELO3C026789.2 Cucumis melo HOM05D005616 ORTHO05D006975 1.6e-99 366.7 237 75.9
Eucgr.J00201 Eucalyptus grandis HOM05D005616 ORTHO05D006975 1.0e-98 364.0 278 67.6
Ca_15132_v3 Cicer arietinum L. HOM05D005616 ORTHO05D006975 1.3e-98 363.6 255 69.8
Sabra08G0051100 Salix brachista HOM05D005616 ORTHO05D006975 2.3e-98 362.8 277 66.1
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 3.0e-98 362.5 277 65.3
Potri.008G069500 Populus trichocarpa HOM05D005616 ORTHO05D006975 3.0e-98 362.5 277 66.1
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 3.0e-98 362.5 279 64.9
GSVIVG01032805001 Vitis vinifera HOM05D005616 ORTHO05D006975 3.0e-98 362.5 280 67.5
PSO339G0515 Papaver somniferum HOM05D005616 ORTHO05D006975 1.1e-97 360.5 277 66.8
PSO384G3782 Papaver somniferum HOM05D005616 ORTHO05D006975 2.5e-97 359.4 277 66.4
Phvul.001G244100 Phaseolus vulgaris HOM05D005616 ORTHO05D006975 2.5e-97 359.4 274 65.7
Cfa001309 Carpinus fangiana HOM05D005616 ORTHO05D006975 3.3e-97 359.0 207 84.1
Duzib128G0549 Durio zibethinus HOM05D005616 ORTHO05D006975 3.6e-96 355.5 277 62.8
PSO675G8834 Papaver somniferum HOM05D005616 ORTHO05D006975 4.7e-96 355.1 283 64.7
Potri.012G145600 Populus trichocarpa HOM05D005616 ORTHO05D006975 4.7e-96 355.1 253 68.8
Cc02_g06410 Coffea canephora HOM05D005616 ORTHO05D006975 6.2e-96 354.8 275 63.6
THA.LOC104816542 Tarenaya hassleriana HOM05D005616 ORTHO05D006975 8.1e-96 354.4 277 65.0
AL6G15480 Arabidopsis lyrata HOM05D005616 ORTHO05D006975 1.1e-95 354.0 277 64.3
TAR623G1070 Trochodendron aralioides HOM05D005616 ORTHO05D006975 1.1e-95 354.0 254 68.5
PGSC0003DMG400010237 Solanum tuberosum HOM05D005616 ORTHO05D006975 1.8e-95 353.2 274 65.0
Solyc02g076760.3 Solanum lycopersicum HOM05D005616 ORTHO05D006975 3.1e-95 352.4 266 65.4
AT1G07780 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 4.0e-95 352.1 277 62.8
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 4.0e-95 352.1 237 73.4
AT5G05590 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 5.2e-95 351.7 277 62.8
COL.COLO4_25743 Corchorus olitorius HOM05D005616 ORTHO05D006975 5.2e-95 351.7 251 68.5
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 5.2e-95 351.7 277 64.6
Gohir.A10G237500 Gossypium hirsutum HOM05D005616 ORTHO05D006975 5.2e-95 351.7 273 65.6
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 6.8e-95 351.3 266 65.0
DCAR_023439 Daucus carota HOM05D005616 ORTHO05D006975 8.9e-95 350.9 241 71.0
Thhalv10014368m.g Eutrema salsugineum HOM05D005616 ORTHO05D006975 2.0e-94 349.7 278 63.7
ECA233G4091 Erigeron canadensis HOM05D005616 ORTHO05D006975 4.4e-94 348.6 277 62.1
Sp6g37270 Schrenkiella parvula HOM05D005616 ORTHO05D006975 4.4e-94 348.6 275 62.9
BcaB05g21698 Brassica carinata HOM05D005616 ORTHO05D006975 9.9e-94 347.4 278 64.7
Aqoxy4G02536 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 1.3e-93 347.1 279 63.4
Carub.0006s0449 Capsella rubella HOM05D005616 ORTHO05D006975 1.3e-93 347.1 278 63.7
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 1.7e-93 346.7 261 66.3
Nitab4.5_0003454g0010 Nicotiana tabacum HOM05D005616 ORTHO05D006975 2.9e-93 345.9 214 78.0
PSO017G0320 Papaver somniferum HOM05D005616 ORTHO05D006975 3.8e-93 345.5 217 76.5
Aa31LG11G6640 Aethionema arabicum HOM05D005616 ORTHO05D006975 4.9e-93 345.1 256 66.0
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 8.4e-93 344.4 276 64.1
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea HOM05D005616 ORTHO05D006975 1.1e-92 344.0 205 80.5
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 1.4e-92 343.6 207 78.3
Lsat_1_v5_gn_8_11701 Lactuca sativa HOM05D005616 ORTHO05D006975 1.4e-92 343.6 245 69.4
Sopen06g017380 Solanum pennellii HOM05D005616 ORTHO05D006975 1.4e-92 343.6 268 63.4
PGSC0003DMG401008474 Solanum tuberosum HOM05D005616 ORTHO05D006975 1.4e-92 343.6 268 63.4
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea HOM05D005616 ORTHO05D006975 1.9e-92 343.2 204 80.4
AUR62012260 Chenopodium quinoa HOM05D005616 ORTHO05D006975 1.9e-92 343.2 214 77.1
EL10Ac1g02124 Beta vulgaris HOM05D005616 ORTHO05D006975 3.2e-92 342.4 214 75.7
Peaxi162Scf00801g00729 Petunia axillaris HOM05D005616 ORTHO05D006975 3.2e-92 342.4 233 70.8
Solyc06g051410.4 Solanum lycopersicum HOM05D005616 ORTHO05D006975 4.2e-92 342.0 275 61.8
BraA02t04856Z Brassica rapa HOM05D005616 ORTHO05D006975 7.1e-92 341.3 253 68.0
VMungo1383G1171 Vigna mungo HOM05D005616 ORTHO05D006975 7.1e-92 341.3 232 70.7
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 2.1e-91 339.7 233 70.0
SalBow6G5046 Salvia bowleyana HOM05D005616 ORTHO05D006975 2.1e-91 339.7 233 70.4
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 3.5e-91 339.0 223 71.7
BcaB05g21694 Brassica carinata HOM05D005616 ORTHO05D006975 4.6e-91 338.6 276 63.4
CARHR034480 Cardamine hirsuta HOM05D005616 ORTHO05D006975 6.0e-91 338.2 253 67.6
Sc10g0002410 Simmondsia chinensis HOM05D005616 ORTHO05D006975 7.8e-91 337.8 277 59.9
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 2.3e-90 336.3 216 73.1
AUR62022893 Chenopodium quinoa HOM05D005616 ORTHO05D006975 1.5e-89 333.6 241 69.7
CSS0019139 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 2.5e-89 332.8 207 76.3
Gorai.011G289500 Gossypium raimondii HOM05D005616 ORTHO05D006975 2.5e-89 332.8 277 62.1
Gohir.D10G249200 Gossypium hirsutum HOM05D005616 ORTHO05D006975 5.6e-89 331.6 277 62.1
PGR044G0338 Punica granatum HOM05D005616 ORTHO05D006975 9.6e-89 330.9 205 78.0
Hund13869 Selenicereus undatus HOM05D005616 ORTHO05D006975 9.6e-89 330.9 270 63.0
BolC2t06207H Brassica oleracea HOM05D005616 ORTHO05D006975 1.6e-88 330.1 253 66.0
Gohir.D04G132700 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.6e-88 330.1 246 66.3
MBI19_g36756_MAGBIO Magnolia biondii HOM05D005616 ORTHO05D006975 4.8e-88 328.6 212 73.6
Nitab4.5_0010803g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 4.2e-84 315.5 204 76.0
Aqoxy5G03614 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 1.6e-83 313.5 196 76.5
ATR0730G169 Amborella trichopoda HOM05D005616 ORTHO05D006975 7.9e-83 311.2 242 64.0
SHI03421 Sapria himalayana HOM05D005616 ORTHO05D006975 3.0e-82 309.3 211 69.7
AUR62028615 Chenopodium quinoa HOM05D005616 ORTHO05D006975 7.1e-76 288.1 251 62.5
Os02g0266000 Oryza sativa ssp. japonica HOM05D005616 ORTHO05D006975 3.5e-75 285.8 208 65.4
HPP92_011508 Vanilla planifolia HOM05D005616 ORTHO05D006975 7.9e-75 284.6 221 61.5
TAR369G1110 Trochodendron aralioides HOM05D005616 ORTHO05D006975 6.7e-74 281.6 214 65.9
unitig_0.g2023 Utricularia gibba HOM05D005616 ORTHO05D006975 1.1e-73 280.8 196 68.9
Zm00001eb203980 Zea mays HOM05D005616 ORTHO05D006975 2.5e-73 279.6 216 62.5
Zm00001eb281510 Zea mays HOM05D005616 ORTHO05D006975 1.3e-72 277.3 215 61.4
SEGI_33372 Sequoiadendron giganteum HOM05D005616 ORTHO05D006975 9.0e-71 271.2 206 62.6
Aqoxy332s005 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 4.3e-65 252.3 182 70.9
Pp3c17_23550 Physcomitrium patens HOM05D005616 ORTHO05D006975 1.2e-62 244.2 210 55.7
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 1.1e-60 237.7 250 52.0
Mapoly0041s0067 Marchantia polymorpha HOM05D005616 ORTHO05D006975 1.1e-60 237.7 233 51.9
AT1G29410 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 2.7e-59 233.0 201 58.7
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis HOM05D005616 ORTHO05D006975 1.1e-57 227.6 209 51.7
Cre12.g519000 Chlamydomonas reinhardtii HOM05D005616 ORTHO05D006975 1.5e-57 227.3 244 45.1
SMO364G0619 Selaginella moellendorffii HOM05D005616 ORTHO05D006975 1.9e-57 226.9 212 53.8
CAN.G370.83 Capsicum annuum HOM05D002257 ORTHO05D006975 9.7e-57 224.6 196 60.2
C02p02440 Brassica napus HOM05D005616 ORTHO05D006975 2.9e-53 213.0 177 63.3
FAN17G0984 Fragaria x ananassa HOM05D002859 ORTHO05D003120 4.2e-52 209.1 139 77.0
Dinv21739 Davidia involucrata HOM05D005616 ORTHO05D006975 7.9e-51 204.9 119 76.5
MCO02G328 Micromonas commoda HOM05D005616 ORTHO05D006975 2.4e-47 193.4 235 38.7
CiPaw.01G059100 Carya illinoinensis HOM05D005616 ORTHO05D006975 5.0e-45 185.7 109 82.6
PRCOL_00006470 Prasinoderma coloniale HOM05D005616 ORTHO05D006975 1.8e-39 167.2 213 40.8
Nn2g13147 Nelumbo nucifera HOM05D005616 ORTHO05D006975 3.3e-33 146.4 128 59.4
Potri.014G188400 Populus trichocarpa HOM05D005616 ORTHO05D006975 1.7e-32 144.1 130 58.5
DCAR_029632 Daucus carota HOM05D000090 ORTHO05D001584 4.0e-26 122.9 91 62.6
MSTRG.13829 Avicennia marina HOM05D005616 ORTHO05D006975 7.0e-23 112.1 88 64.8
Atru.chr12.48 Acer truncatum HOM05D005616 ORTHO05D006975 1.6e-22 110.9 110 52.7
CBR_g37169 Chara braunii HOM05D005616 ORTHO05D006975 1.7e-21 107.5 110 43.6
Dinv21738 Davidia involucrata HOM05D005616 ORTHO05D006975 2.0e-17 94.0 62 72.6
Cfa025268 Carpinus fangiana HOM05D003366 ORTHO05D004562 6.6e-13 79.0 250 32.0
Atru.chr7.2145 Acer truncatum HOM05D005616 ORTHO05D006975 6.8e-10 68.9 44 70.5
SGA_v2.0_scaffold250G44984 Striga asiatica HOM05D005616 ORTHO05D401959 2.9e-08 63.5 59 59.3


User provided reference genes

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