Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 4.0e-105 384.8 197 100.0
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 3.5e-69 265.4 197 70.1
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 1.7e-63 246.5 196 64.8
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 4.2e-62 241.9 196 64.8
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 4.2e-62 241.9 191 67.5
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 3.0e-60 235.7 190 68.4
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.5e-59 233.4 195 62.1
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 3.3e-59 232.3 201 61.7
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 4.3e-59 231.9 161 76.4
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 9.6e-59 230.7 189 63.0
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.6e-58 229.9 197 61.4
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.1e-58 229.6 197 61.9
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 7.6e-56 221.1 196 58.7
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 1.7e-55 219.9 197 61.4
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 2.9e-55 219.2 191 62.8
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 2.9e-55 219.2 196 57.7
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 1.1e-54 217.2 200 59.0
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 1.9e-54 216.5 198 55.6
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 1.9e-54 216.5 195 59.0
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 3.2e-54 215.7 206 55.8
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 9.3e-54 214.2 200 57.0
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 1.2e-53 213.8 191 59.7
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 2.1e-53 213.0 198 54.5
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 4.6e-53 211.8 199 56.3
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 2.3e-52 209.5 200 56.5
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 2.3e-52 209.5 198 57.1
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 3.9e-52 208.8 197 55.8
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 3.9e-52 208.8 196 57.1
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 6.7e-52 208.0 196 57.1
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 1.5e-51 206.8 193 59.1
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 1.5e-51 206.8 197 57.4
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 1.9e-51 206.5 194 55.2
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 2.5e-51 206.1 199 53.3
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 2.5e-51 206.1 199 55.3
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 9.6e-51 204.1 195 55.4
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 1.6e-50 203.4 196 55.1
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 1.4e-49 200.3 197 53.3
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 2.4e-49 199.5 201 55.2
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 4.0e-49 198.7 202 53.0
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 4.0e-49 198.7 196 56.1
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 6.9e-49 198.0 202 55.0
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 6.9e-49 198.0 194 56.7
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 1.2e-48 197.2 165 63.6
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 2.0e-48 196.4 205 53.2
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 2.6e-48 196.1 198 52.0
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 3.4e-48 195.7 192 54.7
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 5.8e-48 194.9 178 57.9
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 1.0e-47 194.1 144 66.7
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 1.7e-47 193.4 193 53.4
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 6.5e-47 191.4 173 60.1
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 6.5e-47 191.4 173 60.1
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 1.4e-46 190.3 196 52.0
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 3.2e-46 189.1 152 62.5
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 1.2e-45 187.2 195 52.3
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 1.0e-44 184.1 216 48.6
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 3.3e-43 179.1 153 58.8
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 3.3e-43 179.1 194 49.0
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 4.3e-43 178.7 187 54.5
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 7.4e-43 177.9 194 50.0
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 2.1e-42 176.4 193 49.7
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 3.7e-42 175.6 152 59.9
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 3.7e-42 175.6 195 46.7
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 4.8e-42 175.3 139 62.6
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 6.2e-42 174.9 169 53.8
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.1e-41 174.1 191 50.3
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 1.4e-41 173.7 136 63.2
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 2.4e-41 172.9 142 63.4
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 4.5e-40 168.7 167 52.1
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 8.4e-39 164.5 172 51.7
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 3.3e-35 152.5 190 41.1
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 2.8e-34 149.4 118 61.9
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 1.1e-33 147.5 195 47.2
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 1.8e-33 146.7 194 45.9
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 2.4e-33 146.4 205 40.0
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 2.4e-33 146.4 195 44.1
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 3.1e-33 146.0 195 44.1
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 5.3e-33 145.2 201 41.8
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 6.9e-33 144.8 196 41.3
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 1.5e-32 143.7 193 44.0
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 1.5e-32 143.7 193 44.0
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 3.4e-32 142.5 197 41.1
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 1.3e-31 140.6 144 53.5
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 1.7e-31 140.2 190 43.7
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 2.9e-31 139.4 139 53.2
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 5.0e-31 138.7 204 38.7
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 6.5e-31 138.3 190 40.0
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 1.1e-30 137.5 183 42.6
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 2.5e-30 136.3 139 50.4
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 5.5e-30 135.2 197 39.1
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 1.6e-29 133.7 137 49.6
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 4.6e-29 132.1 137 50.4
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 2.0e-27 126.7 200 40.5
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 2.5e-27 126.3 181 43.6
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 1.7e-26 123.6 155 42.6
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 2.7e-21 106.3 78 64.1
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 8.8e-20 101.3 159 36.5
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 1.4e-17 94.0 122 44.3
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 1.8e-17 93.6 139 36.7
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 2.5e-14 83.2 121 41.3
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 1.6e-13 80.5 191 25.7
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 3.9e-12 75.9 155 33.5
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 5.2e-12 75.5 142 35.9


User provided reference genes

Program Settings