Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G226800 Prunus persica HOM05D007671 ORTHO05D009777 1.7e-44 182.2 87 100.0
Prupe.8G172200 Prunus persica HOM05D007671 ORTHO05D009777 2.3e-33 145.2 77 87.0
Prupe.1G113700 Prunus persica HOM05D007671 ORTHO05D009777 1.3e-31 139.4 71 91.5
Potri.004G202466 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.4e-30 135.2 77 83.1
Prupe.1G136000 Prunus persica HOM05D007671 ORTHO05D009777 5.4e-30 134.0 73 83.6
Potri.005G106800 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.3e-28 129.4 73 83.6
Potri.005G107066 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.7e-28 129.0 85 74.1
Potri.005G106600 Populus trichocarpa HOM05D007671 ORTHO05D009777 4.3e-27 124.4 78 76.9
Prupe.1G117400 Prunus persica HOM05D007671 ORTHO05D009777 4.3e-27 124.4 60 93.3
Prupe.1G384200 Prunus persica HOM05D007671 ORTHO05D009777 1.2e-26 122.9 64 87.5
Gohir.A11G237966 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.8e-26 121.7 68 86.8
Manes.11G047175 Manihot esculenta HOM05D007671 ORTHO05D009777 6.2e-26 120.6 68 83.8
Potri.005G106933 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.1e-25 119.8 83 71.1
Prupe.1G098500 Prunus persica HOM05D007671 ORTHO05D009777 4.0e-25 117.9 62 88.7
Gorai.005G063500 Gossypium raimondii HOM05D007671 ORTHO05D009777 6.8e-25 117.1 68 80.9
Gorai.005G063700 Gossypium raimondii HOM05D007671 ORTHO05D009777 6.8e-25 117.1 68 80.9
Gorai.005G064600 Gossypium raimondii HOM05D007671 ORTHO05D009777 6.8e-25 117.1 68 80.9
Gohir.D02G056933 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.6e-24 115.2 68 80.9
Gohir.D02G057375 Gossypium hirsutum HOM05D007671 ORTHO05D009777 3.4e-24 114.8 68 79.4
Manes.06G007051 Manihot esculenta HOM05D007671 ORTHO05D009777 9.9e-24 113.2 65 84.6
Manes.01G190050 Manihot esculenta HOM05D007671 ORTHO05D009777 1.3e-23 112.8 69 75.4
Gohir.A11G238032 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.2e-23 112.1 67 82.1
Glyma.10G232100 Glycine max HOM05D007671 ORTHO05D009777 4.9e-23 110.9 64 79.7
CiPaw.01G168300 Carya illinoinensis HOM05D007671 ORTHO05D009777 2.4e-22 108.6 67 76.1
Prupe.1G136200 Prunus persica HOM05D007671 ORTHO05D009777 2.7e-21 105.1 62 82.3
Gohir.1Z049332 Gossypium hirsutum HOM05D007671 ORTHO05D009777 3.5e-21 104.8 69 72.5
Migut.N01038 Erythranthe guttata HOM05D007671 ORTHO05D009777 4.6e-21 104.4 70 71.4
Manes.06G006950 Manihot esculenta HOM05D007671 ORTHO05D009777 1.7e-20 102.4 59 81.4
Prupe.2G064500 Prunus persica HOM05D007671 ORTHO05D009777 1.7e-20 102.4 60 81.7
CiPaw.02G098900 Carya illinoinensis HOM05D007671 ORTHO05D009777 2.3e-20 102.1 63 81.0
Manes.14G093601 Manihot esculenta HOM05D007671 ORTHO05D009777 3.0e-20 101.7 78 67.9
Gorai.007G266800 Gossypium raimondii HOM05D007671 ORTHO05D009777 5.1e-20 100.9 65 76.9
Thhalv10009901m.g Eutrema salsugineum HOM05D007671 ORTHO05D009777 6.6e-20 100.5 66 74.2
Prupe.1G232200 Prunus persica HOM05D007671 ORTHO05D009777 6.6e-20 100.5 55 87.3
Prupe.1G135800 Prunus persica HOM05D007671 ORTHO05D009777 2.8e-18 95.1 52 82.7
Migut.E00372 Erythranthe guttata HOM05D007671 ORTHO05D009777 4.7e-18 94.4 72 68.1
Carub.0005s0319 Capsella rubella HOM05D007671 ORTHO05D009777 1.1e-17 93.2 66 68.2
CiPaw.08G017600 Carya illinoinensis HOM05D007671 ORTHO05D009777 4.0e-17 91.3 50 80.0
Manes.01G151801 Manihot esculenta HOM05D007671 ORTHO05D009777 2.6e-16 88.6 52 82.7
Prupe.1G136100 Prunus persica HOM05D007671 ORTHO05D009777 2.2e-15 85.5 55 78.2
A06p47690 Brassica napus HOM05D007671 ORTHO05D009777 6.4e-15 84.0 64 67.2
Gohir.D02G057184 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.1e-14 83.2 50 82.0
Gohir.A02G052202 Gossypium hirsutum HOM05D007671 ORTHO05D009777 7.1e-14 80.5 57 70.2
Potri.008G047850 Populus trichocarpa HOM05D007671 ORTHO05D009777 7.1e-14 80.5 62 67.7
Migut.N02391 Erythranthe guttata HOM05D007671 ORTHO05D009777 2.1e-13 79.0 53 73.6
Carub.0005s0180 Capsella rubella HOM05D007671 ORTHO05D009777 2.7e-13 78.6 59 64.4
Thhalv10006404m.g Eutrema salsugineum HOM05D007671 ORTHO05D009777 7.8e-13 77.0 67 65.7
FAN24G3042 Fragaria x ananassa HOM05D007671 ORTHO05D009777 1.0e-12 76.6 41 90.2
Gohir.D08G256350 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.3e-12 75.5 38 94.7
Manes.06G038352 Manihot esculenta HOM05D007671 ORTHO05D009777 5.1e-12 74.3 64 64.1
C03p61310 Brassica napus HOM05D007671 ORTHO05D009777 2.5e-11 72.0 58 60.3
Gohir.A08G235950 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.5e-11 72.0 35 97.1
FAN20G2582 Fragaria x ananassa HOM05D007671 ORTHO05D035424 4.3e-11 71.2 43 74.4
Migut.N02115 Erythranthe guttata HOM05D007671 ORTHO05D009777 5.6e-11 70.9 48 75.0
Os02g0158701 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 7.3e-11 70.5 36 77.8
Pp3c12_8280 Physcomitrium patens HOM05D007671 ORTHO05D009777 2.1e-10 68.9 76 56.6
Pp3c12_8281 Physcomitrium patens HOM05D007671 ORTHO05D009777 2.1e-10 68.9 76 56.6
Pp3c12_8290 Physcomitrium patens HOM05D007671 ORTHO05D009777 2.1e-10 68.9 76 56.6
Os08g0114150 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 4.8e-10 67.8 46 73.9
Aqoxy6G01862 Aquilegia oxysepala HOM05D007671 ORTHO05D009777 8.1e-10 67.0 45 75.6
Mapoly3284s0001 Marchantia polymorpha HOM05D007671 ORTHO05D009777 8.1e-10 67.0 57 68.4
Os02g0811650 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 8.1e-10 67.0 38 73.7
PGSC0003DMG401028532 Solanum tuberosum HOM05D007671 ORTHO05D009777 8.1e-10 67.0 45 66.7
Mapoly0045s0139 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.4e-09 65.5 63 61.9
Os07g0685600 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 3.1e-09 65.1 36 72.2
Os02g0193933 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 5.3e-09 64.3 36 75.0
SHI08305 Sapria himalayana HOM05D007671 ORTHO05D009777 1.5e-08 62.8 37 86.5
Os02g0159850 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 2.0e-08 62.4 36 72.2
Os07g0595750 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 2.6e-08 62.0 36 72.2
Os07g0661450 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 2.6e-08 62.0 36 72.2
Gohir.D02G056966 Gossypium hirsutum HOM05D007671 ORTHO05D009777 3.4e-08 61.6 35 82.9
Mapoly0010s0188 Marchantia polymorpha HOM05D007671 ORTHO05D009777 3.4e-08 61.6 47 70.2
Os02g0808601 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 3.4e-08 61.6 36 72.2
Potri.007G002300 Populus trichocarpa HOM05D007671 ORTHO05D009777 4.4e-08 61.2 40 67.5
Pp3c23_15500 Physcomitrium patens HOM05D007671 ORTHO05D009777 7.6e-08 60.5 40 80.0
Mapoly0012s0007 Marchantia polymorpha HOM05D007671 ORTHO05D009777 9.9e-08 60.1 36 86.1
Mapoly0130s0018 Marchantia polymorpha HOM05D007671 ORTHO05D009777 9.9e-08 60.1 37 83.8
Mapoly0168s0020 Marchantia polymorpha HOM05D007671 ORTHO05D009777 9.9e-08 60.1 36 86.1
Mapoly0170s0037 Marchantia polymorpha HOM05D007671 ORTHO05D009777 9.9e-08 60.1 38 81.6
Mapoly0047s0081 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.2e-07 58.9 36 83.3
Mapoly0124s0032 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.9e-07 58.5 35 85.7
EL10Ac5g10720 Beta vulgaris HOM05D007671 ORTHO05D009777 4.9e-07 57.8 29 79.3
Mapoly0025s0123 Marchantia polymorpha HOM05D007671 ORTHO05D009777 8.4e-07 57.0 34 85.3
Os02g0811501 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 8.4e-07 57.0 36 69.4
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 1.9e-06 55.8 31 74.2
Mapoly0041s0016 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.4e-06 55.5 39 74.4
COL.COLO4_30378 Corchorus olitorius HOM05D007671 ORTHO05D009777 7.1e-06 53.9 35 68.6


User provided reference genes

Program Settings