Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G225500 Prunus persica HOM05D009842 ORTHO05D011134 1.2e-89 333.2 166 100.0
MD01G1118400 Malus domestica HOM05D009842 ORTHO05D011134 2.1e-67 259.2 158 77.8
ClCG02G013580 Citrullus lanatus HOM05D009842 ORTHO05D011134 1.9e-44 183.0 167 58.7
PGR142G3647 Punica granatum HOM05D009842 ORTHO05D011134 2.4e-42 176.0 168 53.6
MELO3C023815.2 Cucumis melo HOM05D009842 ORTHO05D011134 6.9e-42 174.5 172 52.9
Solyc05g054840.3 Solanum lycopersicum HOM05D009842 ORTHO05D011134 9.0e-42 174.1 168 54.8
PGSC0003DMG400023509 Solanum tuberosum HOM05D009842 ORTHO05D011134 2.6e-41 172.6 169 53.3
Sopen05g033310 Solanum pennellii HOM05D009842 ORTHO05D011134 1.3e-40 170.2 168 53.6
CsaV3_5G006590 Cucumis sativus L. HOM05D009842 ORTHO05D011134 6.4e-40 167.9 167 53.9
Sed0020761 Sechium edule HOM05D009842 ORTHO05D011134 6.4e-40 167.9 167 56.3
Dinv31397 Davidia involucrata HOM05D009842 ORTHO05D011134 1.4e-39 166.8 166 54.2
Actinidia38217 Actinidia chinensis HOM05D009842 ORTHO05D011134 1.9e-39 166.4 173 51.4
Nitab4.5_0000914g0210 Nicotiana tabacum HOM05D009842 ORTHO05D011134 7.1e-39 164.5 166 50.0
Nitab4.5_0011080g0030 Nicotiana tabacum HOM05D000454 ORTHO05D000591 1.6e-38 163.3 166 49.4
TAR636G0871 Trochodendron aralioides HOM05D009842 ORTHO05D011134 1.8e-34 149.8 176 48.3
Nn2g10535 Nelumbo nucifera HOM05D009842 ORTHO05D011134 6.9e-34 147.9 181 46.4
TWI38G0364 Tripterygium wilfordii HOM05D009842 ORTHO05D011134 1.4e-31 140.2 145 51.0
Cc02_g08540 Coffea canephora HOM05D009842 ORTHO05D011134 2.7e-30 136.0 180 46.7
PSO339G5653 Papaver somniferum HOM05D009842 ORTHO05D011134 3.5e-30 135.6 168 45.8
PSO384G1346 Papaver somniferum HOM05D009842 ORTHO05D011134 4.6e-30 135.2 168 45.2
CSS0009421 Camellia sinensis var. sinensis HOM05D009842 ORTHO05D011134 8.2e-27 124.4 163 45.4
CSS0024730 Camellia sinensis var. sinensis HOM05D009842 ORTHO05D011134 1.0e-24 117.5 181 40.9
Os05g0120800 Oryza sativa ssp. japonica HOM05D009842 ORTHO05D011134 1.3e-19 100.5 149 38.9
HPP92_006590 Vanilla planifolia HOM05D009842 ORTHO05D011134 3.7e-19 99.0 163 35.6
Zm00001eb265980 Zea mays HOM05D009842 ORTHO05D011134 1.2e-17 94.0 159 35.2
Actinidia02992 Actinidia chinensis HOM05D009842 ORTHO05D011134 1.1e-15 87.4 170 33.5
Peaxi162Scf00015g02512 Petunia axillaris HOM05D009842 ORTHO05D011134 3.6e-14 82.4 158 34.2
AagrBONN_evm.TU.Sc2ySwM_368.1565 Anthoceros agrestis HOM05D013267 ORTHO05D011134 3.7e-11 72.4 220 25.9
SMO165G0144 Selaginella moellendorffii HOM05D013267 ORTHO05D011134 1.2e-09 67.4 218 26.6
Cre16.g688450 Chlamydomonas reinhardtii HOM05D013267 ORTHO05D011134 2.5e-07 59.7 214 24.3
Mapoly0003s0076 Marchantia polymorpha HOM05D013267 ORTHO05D011134 3.2e-07 59.3 217 24.0
MCO02G316 Micromonas commoda HOM05D013267 ORTHO05D011134 7.9e-06 54.7 216 22.2


User provided reference genes

Program Settings