Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 1.3e-84 316.6 192 100.0
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 2.3e-73 279.3 188 88.8
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 1.2e-58 230.3 197 65.5
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 1.5e-56 223.4 191 67.0
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.9e-56 223.0 190 67.9
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 1.9e-56 223.0 190 76.3
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 5.7e-56 221.5 190 72.1
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.2e-55 219.5 190 71.6
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 1.1e-54 217.2 198 63.1
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 2.2e-52 209.5 188 62.8
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 9.4e-51 204.1 206 58.3
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 1.8e-49 199.9 191 67.5
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 1.8e-49 199.9 191 68.6
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 2.3e-49 199.5 190 60.0
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 3.0e-49 199.1 184 61.4
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 3.9e-49 198.7 189 66.1
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 3.9e-49 198.7 189 66.1
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 5.1e-49 198.4 180 66.7
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 1.5e-48 196.8 183 61.2
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 4.4e-48 195.3 184 63.0
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 9.7e-48 194.1 188 57.4
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 2.4e-46 189.5 188 56.4
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 4.1e-46 188.7 190 71.1
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 4.1e-46 188.7 190 55.8
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 2.0e-45 186.4 193 62.7
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 2.0e-45 186.4 191 58.6
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 2.6e-45 186.0 191 63.9
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 3.4e-45 185.7 192 64.1
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 7.7e-45 184.5 189 56.6
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 2.2e-44 183.0 187 55.1
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 3.8e-44 182.2 188 55.9
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 1.1e-43 180.6 185 59.5
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 1.9e-43 179.9 183 55.7
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 7.2e-43 177.9 182 56.6
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 9.4e-43 177.6 199 60.8
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 1.2e-42 177.2 178 59.0
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 1.2e-42 177.2 192 55.7
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 2.1e-42 176.4 182 56.6
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 2.7e-42 176.0 188 59.0
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 2.7e-42 176.0 187 56.1
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 4.7e-42 175.3 196 56.1
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 4.7e-42 175.3 177 60.5
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 1.0e-41 174.1 187 55.1
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 3.0e-41 172.6 188 60.1
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 3.9e-41 172.2 166 56.6
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 5.2e-41 171.8 190 55.3
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 5.2e-41 171.8 188 54.3
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 5.2e-41 171.8 187 52.4
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 6.7e-41 171.4 203 56.2
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 8.8e-41 171.0 183 52.5
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 1.5e-40 170.2 191 55.0
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 1.5e-40 170.2 185 53.5
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 2.0e-40 169.9 192 51.0
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 4.4e-40 168.7 199 50.8
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 4.4e-40 168.7 195 49.7
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 4.4e-40 168.7 191 51.8
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 1.7e-39 166.8 184 54.3
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 2.2e-39 166.4 177 56.5
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 2.8e-39 166.0 199 59.8
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 4.8e-39 165.2 184 53.3
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 6.3e-39 164.9 181 53.0
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 8.2e-39 164.5 184 57.6
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 1.1e-38 164.1 181 53.6
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 1.1e-38 164.1 181 53.6
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 1.1e-38 164.1 181 53.6
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 1.4e-38 163.7 208 52.9
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 1.8e-38 163.3 176 56.8
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 3.1e-38 162.5 187 54.0
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 4.1e-38 162.2 202 51.5
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 5.3e-38 161.8 129 59.7
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 5.3e-38 161.8 173 52.0
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 5.3e-38 161.8 160 55.0
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 9.1e-38 161.0 173 53.8
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 9.1e-38 161.0 186 58.1
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 1.2e-37 160.6 199 59.3
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 1.2e-37 160.6 185 51.4
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 1.6e-37 160.2 147 57.1
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 2.6e-37 159.5 190 63.7
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 2.6e-37 159.5 194 53.6
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 4.5e-37 158.7 191 55.5
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 3.8e-36 155.6 189 53.4
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 6.5e-36 154.8 194 56.7
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 6.5e-36 154.8 194 56.7
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 8.5e-36 154.5 116 67.2
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 5.5e-35 151.8 95 77.9
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 2.7e-34 149.4 192 63.0
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 4.7e-34 148.7 94 75.5
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 1.4e-33 147.1 191 51.3
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 5.2e-33 145.2 187 51.9
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 8.8e-33 144.4 158 53.2
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 7.5e-32 141.4 147 51.7
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 4.8e-31 138.7 177 44.6
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 1.4e-30 137.1 156 50.0
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 5.3e-30 135.2 197 56.3
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 7.0e-30 134.8 155 66.5
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 1.9e-27 126.7 167 42.5
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 2.1e-26 123.2 135 57.8
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 1.4e-25 120.6 187 41.2
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 6.8e-25 118.2 140 51.4
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 1.3e-23 114.0 135 42.2
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 8.3e-23 111.3 91 60.4
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 4.1e-22 109.0 154 46.8
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 2.9e-20 102.8 184 40.2
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 3.4e-16 89.4 73 56.2
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 1.1e-11 74.3 135 40.7
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 7.3e-11 71.6 87 44.8
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 1.2e-10 70.9 87 46.0


User provided reference genes

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