Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G222400 Prunus persica HOM05D000122 ORTHO05D335897 5.5e-92 340.9 164 100.0
Prupe.2G223000 Prunus persica HOM05D000122 ORTHO05D020613 2.7e-54 215.7 159 69.8
Prupe.2G222600 Prunus persica HOM05D000122 ORTHO05D020613 5.2e-50 201.4 157 66.9
Prupe.2G222900 Prunus persica HOM05D000122 ORTHO05D020613 6.8e-50 201.1 157 66.2
Prupe.2G222500 Prunus persica HOM05D000122 ORTHO05D020613 2.2e-40 169.5 155 63.2
RcHm_v2.0_Chr1g0364171 Rosa chinensis HOM05D000122 ORTHO05D020985 1.9e-15 86.7 158 39.2
RcHm_v2.0_Chr1g0364831 Rosa chinensis HOM05D000122 ORTHO05D017956 2.3e-13 79.7 153 40.5
Prupe.2G224000 Prunus persica HOM05D000122 ORTHO05D011214 1.1e-10 70.9 119 41.2
Prupe.2G223900 Prunus persica HOM05D000122 ORTHO05D011214 5.2e-10 68.6 135 40.0
Prupe.2G223600 Prunus persica HOM05D000031 ORTHO05D011214 2.0e-09 66.6 114 41.2
RcHm_v2.0_Chr1g0364821 Rosa chinensis HOM05D000122 ORTHO05D011214 2.2e-08 63.2 127 37.8
RcHm_v2.0_Chr1g0364771 Rosa chinensis HOM05D000122 ORTHO05D011214 2.9e-08 62.8 97 42.3
Prupe.2G223800 Prunus persica HOM05D000122 ORTHO05D011214 4.9e-08 62.0 121 40.5
Prupe.1G205100 Prunus persica HOM05D000031 ORTHO05D011214 6.4e-08 61.6 121 38.8
Prupe.2G223700 Prunus persica HOM05D000122 ORTHO05D011214 6.4e-08 61.6 117 36.8
Rhsim06G0037400 Rhododendron simsii HOM05D000122 ORTHO05D000139 1.1e-07 60.8 121 37.2
FvH4_7g20190 Fragaria vesca HOM05D000122 ORTHO05D020613 1.4e-07 60.5 123 33.3
MD01G1117000 Malus domestica HOM05D000122 ORTHO05D000139 2.4e-07 59.7 114 39.5
FAN03G2373 Fragaria x ananassa HOM05D000122 ORTHO05D020613 7.1e-07 58.2 159 31.4
Potri.001G043900 Populus trichocarpa HOM05D000122 ORTHO05D000139 9.3e-07 57.8 121 32.2
MD08G1214800 Malus domestica HOM05D000122 ORTHO05D000139 1.2e-06 57.4 125 34.4
FvH4_7g20670 Fragaria vesca HOM05D000122 ORTHO05D011214 1.6e-06 57.0 143 35.0
FAN06G1794 Fragaria x ananassa HOM05D000122 ORTHO05D011214 1.6e-06 57.0 143 35.0
RcHm_v2.0_Chr1g0381261 Rosa chinensis HOM05D000122 ORTHO05D000139 1.6e-06 57.0 129 32.6
FAN01G1460 Fragaria x ananassa HOM05D000031 ORTHO05D011214 2.1e-06 56.6 114 37.7
FAN01G2000 Fragaria x ananassa HOM05D000031 ORTHO05D011214 2.1e-06 56.6 114 37.7
RcHm_v2.0_Chr1g0364961 Rosa chinensis HOM05D000122 ORTHO05D017956 2.1e-06 56.6 157 36.3
CsaV3_3G008110 Cucumis sativus L. HOM05D000122 ORTHO05D000139 2.7e-06 56.2 128 30.5
FAN10G3204 Fragaria x ananassa HOM05D000031 ORTHO05D011214 2.7e-06 56.2 121 35.5
FAN10G3721 Fragaria x ananassa HOM05D000122 ORTHO05D020613 2.7e-06 56.2 117 34.2
Sed0011686 Sechium edule HOM05D000122 ORTHO05D000139 2.7e-06 56.2 123 31.7
Glyma.07G022500 Glycine max HOM05D000122 ORTHO05D000139 3.5e-06 55.8 121 33.9
Glyma.08G219300 Glycine max HOM05D000122 ORTHO05D000139 3.5e-06 55.8 121 33.9
MD01G1116700 Malus domestica HOM05D000122 ORTHO05D000139 3.5e-06 55.8 122 36.9
RcHm_v2.0_Chr1g0370821 Rosa chinensis HOM05D000122 ORTHO05D011214 4.6e-06 55.5 118 37.3
FvH4_7g20030 Fragaria vesca HOM05D000122 ORTHO05D029483 7.8e-06 54.7 117 31.6
FvH4_7g20690 Fragaria vesca HOM05D000122 ORTHO05D011214 7.8e-06 54.7 116 37.1
FAN16G0266 Fragaria x ananassa HOM05D000122 ORTHO05D025490 7.8e-06 54.7 128 31.2
Rhsim06G0037500 Rhododendron simsii HOM05D000122 ORTHO05D000139 7.8e-06 54.7 120 35.8


User provided reference genes

Program Settings