Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 3.6e-52 208.0 106 100.0
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 1.8e-40 169.1 95 86.3
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 7.8e-39 163.7 95 84.2
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 1.7e-38 162.5 87 93.1
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 7.3e-37 157.1 108 77.8
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 9.5e-37 156.8 92 84.8
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 2.1e-36 155.6 95 80.0
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 2.8e-36 155.2 92 80.4
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.8e-36 155.2 95 80.0
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.8e-36 155.2 95 80.0
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 8.0e-36 153.7 95 77.9
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 1.0e-35 153.3 94 78.7
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 1.8e-35 152.5 86 84.9
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 1.8e-35 152.5 86 86.0
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.3e-35 152.1 95 78.9
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.3e-35 152.1 95 78.9
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 2.3e-35 152.1 94 75.5
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 5.2e-35 151.0 92 76.1
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 1.2e-34 149.8 91 76.9
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 1.2e-34 149.8 96 76.0
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 1.2e-34 149.8 95 76.8
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 4.4e-34 147.9 96 72.9
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 4.4e-34 147.9 95 75.8
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 7.5e-34 147.1 89 78.7
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 2.9e-33 145.2 91 74.7
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 2.9e-33 145.2 91 74.7
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 3.7e-33 144.8 95 71.6
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 4.9e-33 144.4 94 74.5
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 4.9e-33 144.4 89 78.7
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.9e-33 144.4 92 76.1
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 8.3e-33 143.7 94 73.4
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 8.3e-33 143.7 89 79.8
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 1.4e-32 142.9 95 70.5
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 1.4e-32 142.9 96 76.0
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 1.8e-32 142.5 95 72.6
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 3.2e-32 141.7 92 75.0
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 3.2e-32 141.7 88 77.3
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 4.1e-32 141.4 95 72.6
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 5.4e-32 141.0 95 73.7
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 5.4e-32 141.0 96 72.9
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 1.2e-31 139.8 89 76.4
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.2e-31 139.8 92 73.9
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 1.2e-31 139.8 96 70.8
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 4.6e-31 137.9 95 69.5
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 4.6e-31 137.9 95 70.5
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 5.9e-31 137.5 95 71.6
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 2.3e-30 135.6 92 72.8
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 3.0e-30 135.2 92 71.7
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 3.0e-30 135.2 93 74.2
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 5.0e-30 134.4 92 71.7
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 5.0e-30 134.4 92 71.7
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 6.6e-30 134.0 90 68.9
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 1.2e-28 129.8 91 69.2
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 1.6e-28 129.4 90 68.9
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 2.8e-28 128.6 95 65.3
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 1.0e-27 126.7 95 62.1
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 3.1e-27 125.2 91 67.0
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 4.0e-27 124.8 91 68.1
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 5.2e-27 124.4 84 70.2
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 1.2e-26 123.2 89 69.7
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 1.5e-26 122.9 80 72.5
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 1.5e-26 122.9 80 73.8
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 5.8e-26 120.9 92 64.1
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 7.5e-26 120.6 80 72.5
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 7.5e-26 120.6 93 63.4
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 9.8e-26 120.2 91 61.5
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 1.3e-25 119.8 80 70.0
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 1.3e-25 119.8 80 70.0
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 1.3e-25 119.8 80 70.0
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 1.3e-25 119.8 80 70.0
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 1.3e-25 119.8 86 66.3
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 2.2e-25 119.0 93 62.4
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 2.2e-25 119.0 86 64.0
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 2.9e-25 118.6 89 62.9
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 4.9e-25 117.9 91 63.7
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 1.1e-24 116.7 119 56.3
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 1.1e-24 116.7 92 60.9
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 1.4e-24 116.3 81 71.6
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 1.9e-24 115.9 90 57.8
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 2.4e-24 115.5 86 61.6
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 4.1e-24 114.8 84 65.5
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 9.2e-24 113.6 86 65.1
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 1.2e-23 113.2 91 57.1
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 2.0e-23 112.5 91 61.5
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 2.7e-23 112.1 91 57.1
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 2.7e-23 112.1 86 66.3
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 3.5e-23 111.7 91 60.4
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 4.6e-23 111.3 80 66.2
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 4.6e-23 111.3 93 57.0
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 6.0e-23 110.9 86 66.3
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 6.0e-23 110.9 86 60.5
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 6.0e-23 110.9 86 60.5
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 7.8e-23 110.5 80 67.5
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 1.3e-22 109.8 80 67.5
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 2.3e-22 109.0 95 55.8
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 3.0e-22 108.6 81 66.7
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 3.0e-22 108.6 95 54.7
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 3.3e-21 105.1 87 57.5
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 5.6e-21 104.4 86 55.8
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 4.7e-20 101.3 68 70.6
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 1.5e-18 96.3 80 57.5
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 2.4e-16 89.0 85 49.4
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 1.6e-15 86.3 102 43.1
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 1.9e-13 79.3 55 67.3
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 8.1e-12 73.9 51 64.7
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 1.1e-11 73.6 81 46.9
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 1.9e-08 62.8 55 54.5


User provided reference genes

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