Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G220800 Prunus persica HOM05D003984 ORTHO05D004740 8.2e-146 520.4 267 100.0
MD07G1182100 Malus domestica HOM05D003984 ORTHO05D004740 9.4e-142 506.9 267 96.6
MD01G1114200 Malus domestica HOM05D003984 ORTHO05D004740 1.0e-140 503.4 267 96.3
RcHm_v2.0_Chr1g0364411 Rosa chinensis HOM05D003984 ORTHO05D004740 9.1e-137 490.3 267 92.5
QL08p057270 Quercus lobata HOM05D003984 ORTHO05D004740 7.2e-134 480.7 266 91.0
FAN10G1795 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.5e-131 473.0 267 90.6
FAN06G2832 Fragaria x ananassa HOM05D003984 ORTHO05D004740 3.4e-131 471.9 267 90.3
CANSAT56G1305 Cannabis sativa HOM05D003984 ORTHO05D004740 4.4e-131 471.5 267 88.8
FAN03G0045 Fragaria x ananassa HOM05D003984 ORTHO05D004740 5.7e-131 471.1 267 90.3
CiPaw.01G278000 Carya illinoinensis HOM05D003984 ORTHO05D004740 9.8e-131 470.3 267 88.4
FvH4_7g20520 Fragaria vesca HOM05D003984 ORTHO05D004740 9.8e-131 470.3 267 90.3
Manes.10G040500 Manihot esculenta HOM05D003984 ORTHO05D004740 1.3e-130 469.9 267 90.3
Cfa001574 Carpinus fangiana HOM05D003984 ORTHO05D004740 2.2e-130 469.2 267 90.3
CiPaw.02G177500 Carya illinoinensis HOM05D003984 ORTHO05D004740 1.4e-129 466.5 268 89.9
Dinv11820 Davidia involucrata HOM05D003984 ORTHO05D004740 4.1e-129 464.9 267 88.0
COL.COLO4_23777 Corchorus olitorius HOM05D003984 ORTHO05D004740 7.7e-128 460.7 267 88.0
Dinv31376 Davidia involucrata HOM05D003984 ORTHO05D004740 1.7e-127 459.5 267 87.3
Potri.008G046000 Populus trichocarpa HOM05D003984 ORTHO05D004740 1.7e-127 459.5 267 88.8
CSS0036351 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 2.9e-127 458.8 267 85.8
Manes.07G104700 Manihot esculenta HOM05D003984 ORTHO05D004740 2.9e-127 458.8 267 88.0
Thecc.10G065000 Theobroma cacao HOM05D003984 ORTHO05D004740 2.9e-127 458.8 267 88.0
CSS0011111 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 3.8e-127 458.4 267 88.0
CSS0025505 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 5.0e-127 458.0 267 85.8
GSVIVG01032647001 Vitis vinifera HOM05D003984 ORTHO05D004740 1.1e-126 456.8 267 87.6
Atru.chr12.610 Acer truncatum HOM05D003984 ORTHO05D004740 2.5e-126 455.7 267 87.3
SGA_v2.0_scaffold62G21447 Striga asiatica HOM05D003984 ORTHO05D004740 7.2e-126 454.1 259 87.3
ClCG09G020350 Citrullus lanatus HOM05D003984 ORTHO05D004740 1.2e-125 453.4 267 85.0
Actinidia13840 Actinidia chinensis HOM05D003984 ORTHO05D004740 2.1e-125 452.6 262 87.4
Lj8A94T49 Lonicera japonica HOM05D003984 ORTHO05D004740 3.6e-125 451.8 263 87.1
Nitab4.5_0000830g0100 Nicotiana tabacum HOM05D003984 ORTHO05D004740 3.6e-125 451.8 262 85.5
Peaxi162Scf01024g00120 Petunia axillaris HOM05D003984 ORTHO05D004740 1.4e-124 449.9 264 85.6
MSTRG.27450 Avicennia marina HOM05D003984 ORTHO05D004740 2.3e-124 449.1 267 85.0
Solyc04g049710.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 3.0e-124 448.7 264 84.5
CsaV3_5G026080 Cucumis sativus L. HOM05D003984 ORTHO05D004740 5.2e-124 448.0 267 83.9
Sopen04g019960 Solanum pennellii HOM05D003984 ORTHO05D004740 5.2e-124 448.0 264 84.5
TWI15G0393 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 5.2e-124 448.0 264 86.0
Nitab4.5_0001248g0030 Nicotiana tabacum HOM05D003984 ORTHO05D004740 6.8e-124 447.6 262 84.7
Medtr1g116240 Medicago truncatula HOM05D003984 ORTHO05D004740 1.2e-123 446.8 267 85.0
Lj5g0020432 Lotus japonicus HOM05D003984 ORTHO05D004740 2.0e-123 446.0 264 85.6
Sed0003028 Sechium edule HOM05D003984 ORTHO05D004740 2.0e-123 446.0 267 83.5
Cc09_g02350 Coffea canephora HOM05D003984 ORTHO05D004740 2.6e-123 445.7 267 83.1
Migut.F02015 Erythranthe guttata HOM05D003984 ORTHO05D004740 2.6e-123 445.7 259 86.1
Sabra08G0032300 Salix brachista HOM05D003984 ORTHO05D004740 4.4e-123 444.9 275 84.7
Ciclev10032445m.g Citrus clementina HOM05D003984 ORTHO05D004740 5.7e-123 444.5 268 84.7
Potri.010G215500 Populus trichocarpa HOM05D003984 ORTHO05D004740 5.7e-123 444.5 269 86.6
Duzib114G0791 Durio zibethinus HOM05D003984 ORTHO05D004740 7.5e-123 444.1 267 86.9
Rhsim09G0154900 Rhododendron simsii HOM05D003984 ORTHO05D004740 7.5e-123 444.1 315 74.6
Oeu055063.1 Olea europaea HOM05D003984 ORTHO05D004740 1.7e-122 443.0 267 83.9
Peaxi162Scf00195g00824 Petunia axillaris HOM05D003984 ORTHO05D004740 2.2e-122 442.6 262 84.7
Duzib128G0096 Durio zibethinus HOM05D003984 ORTHO05D004740 2.8e-122 442.2 268 86.6
Lalb_Chr21g0307521 Lupinus albus HOM05D003984 ORTHO05D004740 8.3e-122 440.7 274 83.2
Glyma.10G294300 Glycine max HOM05D003984 ORTHO05D004740 1.1e-121 440.3 267 83.9
TPR.G10390 Trifolium pratense HOM05D003984 ORTHO05D004740 1.4e-121 439.9 268 84.7
TAR633G2252 Trochodendron aralioides HOM05D003984 ORTHO05D004740 3.1e-121 438.7 267 82.8
Gorai.012G092700 Gossypium raimondii HOM05D003984 ORTHO05D004740 4.1e-121 438.3 267 84.3
Lalb_Chr06g0164371 Lupinus albus HOM05D003984 ORTHO05D004740 1.2e-120 436.8 267 84.3
CSS0002243 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.6e-120 436.4 255 88.6
Gohir.A05G343700 Gossypium hirsutum HOM05D003984 ORTHO05D004740 5.9e-120 434.5 267 83.1
AUR62036011 Chenopodium quinoa HOM05D003984 ORTHO05D004740 1.0e-119 433.7 261 84.3
Lalb_Chr02g0144171 Lupinus albus HOM05D003984 ORTHO05D004740 1.0e-119 433.7 270 83.0
PGR044G2197 Punica granatum HOM05D003984 ORTHO05D004740 1.0e-119 433.7 261 85.1
Psat6g240040 Pisum sativum HOM05D003984 ORTHO05D004740 1.3e-119 433.3 264 84.1
DCAR_019150 Daucus carota HOM05D003984 ORTHO05D004740 1.7e-119 433.0 267 81.3
Nn2g10608 Nelumbo nucifera HOM05D003984 ORTHO05D004740 2.3e-119 432.6 269 80.7
Glyma.20G244200 Glycine max HOM05D003984 ORTHO05D004740 1.1e-118 430.3 262 83.6
VMungo0720G0811 Vigna mungo HOM05D003984 ORTHO05D004740 1.9e-118 429.5 265 83.4
EL10Ac2g03538 Beta vulgaris HOM05D003984 ORTHO05D004740 5.5e-118 427.9 262 83.6
Gohir.D10G216200 Gossypium hirsutum HOM05D003984 ORTHO05D004740 7.2e-118 427.6 267 83.1
Hund22456 Selenicereus undatus HOM05D003984 ORTHO05D004740 9.5e-118 427.2 268 83.6
TWI63G0288 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 1.2e-117 426.8 257 84.0
Gorai.011G241800 Gossypium raimondii HOM05D003984 ORTHO05D004740 1.6e-117 426.4 267 82.8
arahy.Tifrunner.gnm1.ann1.V3HSKN Arachis hypogaea HOM05D003984 ORTHO05D004740 2.1e-117 426.0 267 83.1
Phvul.007G005800 Phaseolus vulgaris HOM05D003984 ORTHO05D004740 8.0e-117 424.1 268 82.1
PGSC0003DMG400032551 Solanum tuberosum HOM05D003984 ORTHO05D004740 8.0e-117 424.1 264 80.7
Gohir.A10G208060 Gossypium hirsutum HOM05D003984 ORTHO05D004740 1.4e-116 423.3 267 83.1
SGA_v2.0_scaffold329G48849 Striga asiatica HOM05D003984 ORTHO05D004740 1.4e-116 423.3 261 82.8
Nitab4.5_0000691g0240 Nicotiana tabacum HOM05D003984 ORTHO05D004740 1.8e-116 422.9 264 80.7
CAN.G186.31 Capsicum annuum HOM05D003984 ORTHO05D004740 5.2e-116 421.4 264 79.5
DCAR_015251 Daucus carota HOM05D003984 ORTHO05D004740 5.2e-116 421.4 250 84.4
Eucgr.J01137 Eucalyptus grandis HOM05D003984 ORTHO05D004740 1.5e-115 419.9 267 80.5
Solyc04g009550.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 2.6e-115 419.1 264 79.9
Nn2g12956 Nelumbo nucifera HOM05D003984 ORTHO05D004740 1.3e-114 416.8 268 80.2
AUR62041612 Chenopodium quinoa HOM05D003984 ORTHO05D004740 2.2e-114 416.0 288 75.7
Haze_16954 Corylus avellana HOM05D003984 ORTHO05D004740 3.7e-114 415.2 238 88.7
TAR623G0696 Trochodendron aralioides HOM05D003984 ORTHO05D004740 3.7e-114 415.2 251 82.9
ECA238G2056 Erigeron canadensis HOM05D003984 ORTHO05D004740 6.3e-114 414.5 259 82.6
Ah.10g033080 Amaranthus hybridus HOM05D003984 ORTHO05D004740 1.4e-113 413.3 285 76.8
Nitab4.5_0004104g0120 Nicotiana tabacum HOM05D003984 ORTHO05D004740 1.4e-113 413.3 250 82.8
Lj1A928T58 Lonicera japonica HOM05D003984 ORTHO05D004740 1.8e-113 412.9 303 72.9
Sed0000226 Sechium edule HOM05D003984 ORTHO05D004740 1.8e-113 412.9 264 79.5
Aqoxy4G03159 Aquilegia oxysepala HOM05D003984 ORTHO05D004740 2.4e-113 412.5 279 78.1
Migut.F01787 Erythranthe guttata HOM05D003984 ORTHO05D004740 3.2e-113 412.1 261 80.1
HanXRQChr12g0367731 Helianthus annuus HOM05D003984 ORTHO05D004740 3.2e-113 412.1 267 79.8
THA.LOC104825886 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 2.9e-111 405.6 264 78.0
Oeu057248.1 Olea europaea HOM05D003984 ORTHO05D004740 5.0e-111 404.8 254 79.5
Sabra10G0166500 Salix brachista HOM05D003984 ORTHO05D004740 6.6e-111 404.4 284 77.5
THA.LOC104824242 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 2.5e-110 402.5 262 79.0
PSO339G0239 Papaver somniferum HOM05D003984 ORTHO05D004740 5.6e-110 401.4 267 78.3
PSO384G2137 Papaver somniferum HOM05D003984 ORTHO05D004740 9.5e-110 400.6 267 77.9
arahy.Tifrunner.gnm1.ann1.B234YK Arachis hypogaea HOM05D003984 ORTHO05D004740 2.1e-109 399.4 320 69.1
HanXRQChr07g0200921 Helianthus annuus HOM05D003984 ORTHO05D004740 2.1e-109 399.4 259 79.9
SalBow3G2899 Salvia bowleyana HOM05D003984 ORTHO05D004740 1.0e-108 397.1 256 80.1
THA.LOC104810167 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 1.8e-108 396.4 250 80.4
PSO339G2647 Papaver somniferum HOM05D003984 ORTHO05D004740 3.1e-108 395.6 269 77.3
Lsat_1_v5_gn_2_115481 Lactuca sativa HOM05D003984 ORTHO05D004740 6.8e-108 394.4 252 81.0
ATR0594G132 Amborella trichopoda HOM05D003984 ORTHO05D004740 3.7e-106 388.7 262 76.0
CDE09G0608 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 5.4e-105 384.8 268 75.0
HPP92_017944 Vanilla planifolia HOM05D003984 ORTHO05D004740 3.0e-103 379.0 266 73.3
Aa31sc33G70 Aethionema arabicum HOM05D003984 ORTHO05D004740 5.0e-103 378.3 266 74.8
Lsat_1_v5_gn_8_21240 Lactuca sativa HOM05D003984 ORTHO05D004740 5.0e-103 378.3 268 73.9
Ca_11380_v3 Cicer arietinum L. HOM05D003984 ORTHO05D004740 6.6e-103 377.9 275 74.2
C06p22550 Brassica napus HOM05D003984 ORTHO05D004740 1.1e-102 377.1 262 74.4
Lj1C926T5 Lonicera japonica HOM05D003984 ORTHO05D004740 1.9e-102 376.3 263 74.9
Os11g0102600 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 1.9e-102 376.3 257 74.7
Os12g0102200 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 1.9e-102 376.3 257 74.7
Thhalv10010647m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 5.6e-102 374.8 262 73.7
HanXRQChr14g0460861 Helianthus annuus HOM05D003984 ORTHO05D004740 5.6e-102 374.8 259 77.2
BcaB02g07705 Brassica carinata HOM05D003984 ORTHO05D004740 7.3e-102 374.4 262 74.8
BcaC08g44716 Brassica carinata HOM05D003984 ORTHO05D004740 7.3e-102 374.4 262 73.7
Gohir.D04G082100 Gossypium hirsutum HOM05D003984 ORTHO05D004740 1.6e-101 373.2 227 84.6
A07p22390 Brassica napus HOM05D003984 ORTHO05D004740 4.7e-101 371.7 262 74.0
AL5G36110 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 6.2e-101 371.3 262 72.9
AL5G36120 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 8.1e-101 370.9 262 73.3
HPP92_019786 Vanilla planifolia HOM05D003984 ORTHO05D004740 8.1e-101 370.9 266 71.4
Carub.0005s2162 Capsella rubella HOM05D003984 ORTHO05D004740 1.4e-100 370.2 262 73.3
AT3G55000 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 2.3e-100 369.4 262 72.9
BolC6t37445H Brassica oleracea HOM05D003984 ORTHO05D004740 3.1e-100 369.0 262 73.3
Carub.0005s2163 Capsella rubella HOM05D003984 ORTHO05D004740 7.5e-99 364.4 262 73.3
CARHR165000 Cardamine hirsuta HOM05D003984 ORTHO05D004740 2.2e-98 362.8 262 73.3
Sp5g07420 Schrenkiella parvula HOM05D003984 ORTHO05D004740 3.7e-98 362.1 263 72.6
Zm00001eb094350 Zea mays HOM05D003984 ORTHO05D004740 3.7e-98 362.1 257 72.8
Sp5g07430 Schrenkiella parvula HOM05D003984 ORTHO05D004740 4.9e-98 361.7 262 73.7
BraA07t29915Z Brassica rapa HOM05D003984 ORTHO05D004740 1.4e-97 360.1 281 69.0
AT3G55005 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 5.4e-97 358.2 264 71.6
Sc20g0002240 Simmondsia chinensis HOM05D003984 ORTHO05D004740 4.6e-96 355.1 261 72.0
unitig_0.g190 Utricularia gibba HOM05D003984 ORTHO05D004740 1.7e-95 353.2 235 77.4
Zm00001eb163130 Zea mays HOM05D003984 ORTHO05D004740 2.3e-95 352.8 257 72.0
CDE02G0952 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 3.9e-95 352.1 253 73.5
MELO3C025490.2 Cucumis melo HOM05D003984 ORTHO05D004740 1.2e-93 347.1 206 86.4
MSTRG.9196 Avicennia marina HOM05D003984 ORTHO05D004740 4.4e-91 338.6 199 86.4
CARHR165010 Cardamine hirsuta HOM05D003984 ORTHO05D004740 6.4e-90 334.7 265 68.3
C08p30240 Brassica napus HOM05D003984 ORTHO05D004740 6.6e-87 324.7 263 66.5
BraA09t40255Z Brassica rapa HOM05D003984 ORTHO05D004740 1.9e-86 323.2 262 65.6
Sopen04g004710 Solanum pennellii HOM05D003984 ORTHO05D004740 9.6e-86 320.9 223 75.8
A09p48020 Brassica napus HOM05D003984 ORTHO05D004740 2.8e-85 319.3 262 65.3
BcaNung04652 Brassica carinata HOM05D003984 ORTHO05D004740 8.1e-85 317.8 263 65.4
BcaB01g00136 Brassica carinata HOM05D003984 ORTHO05D004740 2.0e-83 313.2 263 64.6
Thhalv10010676m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 3.4e-83 312.4 241 70.5
BolC8t50631H Brassica oleracea HOM05D003984 ORTHO05D004740 8.4e-82 307.8 262 63.0
Sc20g0002230 Simmondsia chinensis HOM05D003984 ORTHO05D004740 1.5e-78 297.0 189 80.4
FAN06G1180 Fragaria x ananassa HOM05D003984 ORTHO05D004740 4.3e-78 295.4 174 86.8
FAN01G2342 Fragaria x ananassa HOM05D003984 ORTHO05D004740 3.2e-73 279.3 144 95.1
AagrBONN_evm.TU.Sc2ySwM_344.1695 Anthoceros agrestis HOM05D003984 ORTHO05D004740 1.9e-41 173.7 244 47.1
SEGI_35779 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 3.0e-39 166.4 244 43.9
Actinidia29191 Actinidia chinensis HOM05D003984 ORTHO05D004740 1.1e-38 164.5 120 73.3
Cpa.g.sc1.281 Carica papaya HOM05D003984 ORTHO05D004740 1.4e-36 157.5 117 70.9
Mapoly0066s0078 Marchantia polymorpha HOM05D003984 ORTHO05D004740 1.4e-36 157.5 221 45.7
Pp3c14_5580 Physcomitrium patens HOM05D003984 ORTHO05D004740 3.1e-36 156.4 261 40.2
FAN06G2469 Fragaria x ananassa HOM05D003984 ORTHO05D004740 6.7e-31 138.7 74 95.9
TAR624G0784 Trochodendron aralioides HOM05D003984 ORTHO05D004740 4.4e-30 136.0 93 73.1
SEGI_13922 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 1.3e-26 124.4 89 71.9
CBR_g37750 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-23 114.4 218 37.2
SMO356G0399 Selaginella moellendorffii HOM05D003984 ORTHO05D004740 2.2e-18 97.1 186 37.6
CBR_g10977 Chara braunii HOM05D003984 ORTHO05D004740 4.7e-16 89.4 117 42.7
AUR62035988 Chenopodium quinoa HOM05D003984 ORTHO05D004740 4.7e-16 89.4 94 53.2
HanXRQChr17g0557371 Helianthus annuus HOM05D000549 ORTHO05D004740 7.5e-14 82.0 41 87.8
Nn6g33815 Nelumbo nucifera HOM05D003984 ORTHO05D004740 5.4e-12 75.9 41 82.9
SHI42769 Sapria himalayana HOM05D003984 ORTHO05D004740 5.4e-12 75.9 124 45.2
CSS0046661 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 7.0e-12 75.5 40 85.0
RcHm_v2.0_Chr2g0140211 Rosa chinensis HOM05D003984 ORTHO05D004740 1.2e-11 74.7 42 78.6
PRCOL_00000040 Prasinoderma coloniale HOM05D003984 ORTHO05D004740 2.1e-08 63.9 138 35.5
MCO05G642 Micromonas commoda HOM05D003984 ORTHO05D004740 3.0e-07 60.1 86 36.0
Sabra18G0026300 Salix brachista HOM05D002732 ORTHO05D002955 5.7e-06 55.8 32 87.5


User provided reference genes

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