Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G218900 Prunus persica HOM05D007532 ORTHO05D009483 1.4e-60 236.1 125 100.0
Prupe.7G097300 Prunus persica HOM05D007532 ORTHO05D009483 6.1e-43 177.6 158 68.4
MD14G1037100 Malus domestica HOM05D007532 ORTHO05D009483 1.3e-32 143.3 158 57.6
RcHm_v2.0_Chr3g0475571 Rosa chinensis HOM05D007532 ORTHO05D009483 3.2e-15 85.5 193 39.4
FvH4_6g20110 Fragaria vesca HOM05D007532 ORTHO05D009483 3.5e-14 82.0 194 39.7
FAN14G5580 Fragaria x ananassa HOM05D007532 ORTHO05D009483 3.5e-14 82.0 194 39.7
FAN05G0427 Fragaria x ananassa HOM05D007532 ORTHO05D009483 2.5e-12 75.9 192 37.5
Manes.09G046800 Manihot esculenta HOM05D007532 ORTHO05D009483 2.1e-11 72.8 191 33.5
TWI74G0748 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 2.8e-11 72.4 167 35.9
Phvul.007G269000 Phaseolus vulgaris HOM05D007532 ORTHO05D009483 4.7e-11 71.6 158 34.8
TWI77G0050 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 2.3e-10 69.3 167 35.9
Cfa016678 Carpinus fangiana HOM05D007532 ORTHO05D009483 4.0e-10 68.6 183 33.3
Glyma.10G079300 Glycine max HOM05D007532 ORTHO05D009483 4.0e-10 68.6 168 35.7
Haze_19695 Corylus avellana HOM05D007532 ORTHO05D009483 8.9e-10 67.4 183 31.1
TAR623G0884 Trochodendron aralioides HOM05D007532 ORTHO05D009483 1.2e-09 67.0 182 36.3
Ca_11714_v3 Cicer arietinum L. HOM05D007532 ORTHO05D009483 1.5e-09 66.6 166 34.3
Atru.chr8.1383 Acer truncatum HOM05D007532 ORTHO05D009483 2.0e-09 66.2 187 32.6
CiPaw.10G016200 Carya illinoinensis HOM05D007532 ORTHO05D009483 2.0e-09 66.2 177 33.3
Lj5g0000288 Lotus japonicus HOM05D007532 ORTHO05D009483 3.4e-09 65.5 167 33.5
Ciclev10012763m.g Citrus clementina HOM05D007532 ORTHO05D009483 4.4e-09 65.1 183 33.9
QL07p037073 Quercus lobata HOM05D007532 ORTHO05D009483 1.3e-08 63.5 187 33.2
arahy.Tifrunner.gnm1.ann1.R0B094 Arachis hypogaea HOM05D007532 ORTHO05D009483 2.2e-08 62.8 166 33.7
arahy.Tifrunner.gnm1.ann1.U8RNVP Arachis hypogaea HOM05D007532 ORTHO05D009483 2.2e-08 62.8 166 33.7
Actinidia32050 Actinidia chinensis HOM05D007532 ORTHO05D009483 4.9e-08 61.6 183 33.9
COL.COLO4_29593 Corchorus olitorius HOM05D007532 ORTHO05D009483 1.1e-07 60.5 104 43.3
AUR62037048 Chenopodium quinoa HOM05D007532 ORTHO05D009483 1.4e-07 60.1 163 32.5
AUR62006278 Chenopodium quinoa HOM05D007532 ORTHO05D009483 1.9e-07 59.7 159 32.7
Medtr1g057220 Medicago truncatula HOM05D007532 ORTHO05D009483 1.9e-07 59.7 160 30.0
Duzib093G1477 Durio zibethinus HOM05D007532 ORTHO05D009483 3.2e-07 58.9 100 43.0
Lalb_Chr02g0154541 Lupinus albus HOM05D007532 ORTHO05D009483 5.4e-07 58.2 158 34.2
Cpa.g.sc104.49 Carica papaya HOM05D007532 ORTHO05D009483 7.1e-07 57.8 212 28.8
THA.LOC104824551 Tarenaya hassleriana HOM05D007532 ORTHO05D009483 7.1e-07 57.8 138 34.1
ClCG10G018450 Citrullus lanatus HOM05D007532 ORTHO05D009483 9.2e-07 57.4 157 31.2
Thecc.05G102000 Theobroma cacao HOM05D007532 ORTHO05D009483 1.6e-06 56.6 198 29.3
GSVIVG01033946001 Vitis vinifera HOM05D007532 ORTHO05D009483 1.6e-06 56.6 128 35.2
Gorai.006G150300 Gossypium raimondii HOM05D007532 ORTHO05D009483 2.1e-06 56.2 88 47.7
Gohir.A09G135100 Gossypium hirsutum HOM05D007532 ORTHO05D009483 2.7e-06 55.8 88 47.7
Potri.016G071700 Populus trichocarpa HOM05D007532 ORTHO05D009483 3.5e-06 55.5 197 30.5
Gohir.D09G131700 Gossypium hirsutum HOM05D007532 ORTHO05D009483 4.6e-06 55.1 88 46.6
MELO3C009524.2 Cucumis melo HOM05D007532 ORTHO05D009483 7.8e-06 54.3 166 29.5
Dinv31750 Davidia involucrata HOM05D010118 ORTHO05D009483 7.8e-06 54.3 177 33.3
Duzib106G1076 Durio zibethinus HOM05D007532 ORTHO05D009483 7.8e-06 54.3 88 43.2
Manes.08G032400 Manihot esculenta HOM05D007532 ORTHO05D009483 7.8e-06 54.3 186 31.2
Sed0007351 Sechium edule HOM05D007532 ORTHO05D009483 7.8e-06 54.3 133 33.1


User provided reference genes

Program Settings