Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G213800 Prunus persica HOM05D008287 ORTHO05D010110 2.2e-49 198.7 109 100.0
MD01G1108600 Malus domestica HOM05D008287 ORTHO05D010110 2.8e-28 128.6 95 70.5
TAR629G1172 Trochodendron aralioides HOM05D008287 ORTHO05D010110 1.9e-16 89.4 91 58.2
RcHm_v2.0_Chr1g0363411 Rosa chinensis HOM05D008287 ORTHO05D010110 2.1e-15 85.9 91 54.9
CiPaw.01G272900 Carya illinoinensis HOM05D008287 ORTHO05D010110 2.8e-15 85.5 91 49.5
Gorai.013G025800 Gossypium raimondii HOM05D008287 ORTHO05D010110 2.3e-14 82.4 91 48.4
Phvul.004G082500 Phaseolus vulgaris HOM05D008287 ORTHO05D010110 2.3e-14 82.4 91 45.1
FvH4_7g19600 Fragaria vesca HOM05D008287 ORTHO05D010110 4.0e-14 81.6 90 51.1
FAN06G2349 Fragaria x ananassa HOM05D000286 ORTHO05D009721 4.0e-14 81.6 90 51.1
Duzib114G0252 Durio zibethinus HOM05D008287 ORTHO05D010110 1.2e-13 80.1 91 48.4
FAN01G1692 Fragaria x ananassa HOM05D008287 ORTHO05D010110 1.2e-13 80.1 90 50.0
Sc09g0006380 Simmondsia chinensis HOM05D008287 ORTHO05D010110 2.0e-13 79.3 93 47.3
Gohir.A13G024200 Gossypium hirsutum HOM05D008287 ORTHO05D010110 3.4e-13 78.6 91 49.5
Nn2g10792 Nelumbo nucifera HOM05D008287 ORTHO05D010110 4.4e-13 78.2 91 50.5
FAN03G0373 Fragaria x ananassa HOM05D008287 ORTHO05D010110 7.5e-13 77.4 90 50.0
FAN10G2561 Fragaria x ananassa HOM05D008287 ORTHO05D010110 7.5e-13 77.4 90 48.9
Glyma.16G154900 Glycine max HOM05D008287 ORTHO05D010110 7.5e-13 77.4 91 44.0
Gohir.D13G023100 Gossypium hirsutum HOM05D008287 ORTHO05D010110 9.8e-13 77.0 91 47.3
MBI10_g13401_MAGBIO Magnolia biondii HOM05D008287 ORTHO05D010110 1.3e-12 76.6 92 48.9
Manes.10G045900 Manihot esculenta HOM05D008287 ORTHO05D010110 2.2e-12 75.9 91 48.4
Aqoxy1G01238 Aquilegia oxysepala HOM05D008287 ORTHO05D010110 2.9e-12 75.5 91 46.2
Hma1.2p1_0063F.1_g034480 Hydrangea macrophylla HOM05D008287 ORTHO05D010110 2.9e-12 75.5 93 51.6
Thecc.10G073600 Theobroma cacao HOM05D008287 ORTHO05D010110 3.7e-12 75.1 96 47.9
VMungo0464G1886 Vigna mungo HOM05D008287 ORTHO05D010110 3.7e-12 75.1 91 45.1
Actinidia38852 Actinidia chinensis HOM05D008287 ORTHO05D010110 4.9e-12 74.7 92 46.7
Rhsim09G0151900 Rhododendron simsii HOM05D008287 ORTHO05D010110 4.9e-12 74.7 92 44.6
ClCG05G021010 Citrullus lanatus HOM05D008287 ORTHO05D010110 6.4e-12 74.3 93 47.3
Lalb_Chr19g0129701 Lupinus albus HOM05D008287 ORTHO05D010110 8.3e-12 73.9 91 45.1
Sabra10G0172000 Salix brachista HOM05D008287 ORTHO05D010110 1.1e-11 73.6 96 45.8
Atru.chr12.751 Acer truncatum HOM05D008287 ORTHO05D010110 1.9e-11 72.8 91 45.1
Atru.chr12.776 Acer truncatum HOM05D008287 ORTHO05D010110 1.9e-11 72.8 96 41.7
TPR.G822 Trifolium pratense HOM05D008287 ORTHO05D010110 1.9e-11 72.8 96 38.5
Cfa021511 Carpinus fangiana HOM05D008287 ORTHO05D010110 3.2e-11 72.0 95 46.3
Glyma.02G073500 Glycine max HOM05D008287 ORTHO05D010110 7.0e-11 70.9 92 43.5
Migut.F02005 Erythranthe guttata HOM05D008287 ORTHO05D010110 1.6e-10 69.7 94 42.6
Sed0007335 Sechium edule HOM05D008287 ORTHO05D010110 2.7e-10 68.9 92 43.5
MSTRG.9186 Avicennia marina HOM05D008287 ORTHO05D010110 3.5e-10 68.6 104 47.1
Ciclev10033160m.g Citrus clementina HOM05D008287 ORTHO05D010110 7.8e-10 67.4 94 42.6
PGSC0003DMG400012876 Solanum tuberosum HOM05D008287 ORTHO05D010110 1.0e-09 67.0 105 43.8
CsaV3_5G036300 Cucumis sativus L. HOM05D008287 ORTHO05D010110 3.0e-09 65.5 92 44.6
HanXRQChr01g0011461 Helianthus annuus HOM05D008287 ORTHO05D010110 3.0e-09 65.5 96 41.7
Solyc04g049407.1 Solanum lycopersicum HOM05D008287 ORTHO05D010110 5.0e-09 64.7 91 40.7
Potri.010G222400 Populus trichocarpa HOM05D008287 ORTHO05D010110 1.1e-08 63.5 91 40.7
Sopen04g019400 Solanum pennellii HOM05D008287 ORTHO05D010110 1.1e-08 63.5 91 39.6
Nitab4.5_0000575g0160 Nicotiana tabacum HOM05D008287 ORTHO05D010110 5.6e-08 61.2 105 40.0
Nitab4.5_0010206g0030 Nicotiana tabacum HOM05D008287 ORTHO05D010110 1.2e-07 60.1 91 37.4
Potri.008G039901 Populus trichocarpa HOM05D008287 ORTHO05D010110 1.2e-07 60.1 91 35.2
CANSAT56G0495 Cannabis sativa HOM05D008287 ORTHO05D010110 1.6e-07 59.7 92 34.8
Lsat_1_v5_gn_2_114761 Lactuca sativa HOM05D008287 ORTHO05D010110 1.6e-07 59.7 91 39.6
ECA238G2524 Erigeron canadensis HOM05D008287 ORTHO05D010110 3.6e-07 58.5 91 41.8
unitig_899.g14438 Utricularia gibba HOM05D008287 ORTHO05D010110 8.0e-07 57.4 89 40.4
Sabra08G0027300 Salix brachista HOM05D008287 ORTHO05D010110 5.2e-06 54.7 33 66.7
Medtr6g033505 Medicago truncatula HOM05D008287 ORTHO05D010110 6.8e-06 54.3 91 33.0
SGA_v2.0_scaffold62G21430 Striga asiatica HOM05D008287 ORTHO05D010110 8.9e-06 53.9 32 68.8


User provided reference genes

Program Settings