Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 1.6e-106 389.4 198 100.0
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 1.3e-60 236.9 176 74.4
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 3.3e-59 232.3 170 71.8
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 1.0e-55 220.7 171 68.4
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 3.8e-55 218.8 172 69.8
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 6.5e-55 218.0 143 78.3
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.4e-54 216.9 171 67.8
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.4e-54 216.9 171 67.8
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.4e-54 216.9 171 67.8
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 1.9e-54 216.5 146 74.0
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 1.2e-53 213.8 173 65.9
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 6.1e-53 211.5 171 66.1
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 5.1e-52 208.4 171 64.3
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.1e-51 207.2 169 66.3
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 2.2e-50 203.0 165 66.7
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 2.8e-50 202.6 174 62.1
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 3.1e-49 199.1 173 63.6
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 1.2e-48 197.2 175 63.4
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 3.4e-48 195.7 164 60.4
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 3.4e-48 195.7 135 73.3
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 7.7e-48 194.5 157 65.6
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 1.0e-47 194.1 168 62.5
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 1.3e-47 193.7 150 66.0
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 1.7e-47 193.4 150 65.3
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 1.7e-47 193.4 173 60.7
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 3.8e-47 192.2 146 65.1
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 3.8e-47 192.2 173 60.1
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 5.0e-47 191.8 167 62.3
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 1.9e-46 189.9 173 60.1
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 2.5e-46 189.5 173 60.1
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 4.2e-46 188.7 142 70.4
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 9.4e-46 187.6 173 59.5
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 2.7e-45 186.0 177 59.9
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 2.7e-45 186.0 143 67.1
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 6.1e-45 184.9 136 68.4
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 7.9e-45 184.5 125 74.4
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 1.0e-44 184.1 176 56.8
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 1.0e-44 184.1 170 57.6
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 1.8e-44 183.3 115 74.8
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 1.8e-44 183.3 115 74.8
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 1.8e-44 183.3 134 68.7
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 2.3e-44 183.0 131 64.1
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 2.3e-44 183.0 133 69.2
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 3.9e-44 182.2 137 65.0
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 1.5e-43 180.3 133 67.7
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 1.5e-43 180.3 133 67.7
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 4.3e-43 178.7 140 62.1
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 5.7e-43 178.3 136 65.4
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 5.7e-43 178.3 140 62.9
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 5.7e-43 178.3 116 70.7
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 7.4e-43 177.9 116 71.6
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 9.7e-43 177.6 148 60.8
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 1.7e-42 176.8 139 63.3
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 1.7e-42 176.8 109 76.1
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 2.2e-42 176.4 141 63.8
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 2.2e-42 176.4 133 66.9
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 3.7e-42 175.6 170 57.1
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 4.8e-42 175.3 114 72.8
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 6.3e-42 174.9 137 65.0
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 8.2e-42 174.5 170 57.1
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 3.1e-41 172.6 144 60.4
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 4.1e-41 172.2 175 57.7
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 2.6e-40 169.5 137 61.3
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.6e-40 169.5 144 59.7
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 3.4e-40 169.1 141 65.2
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 3.4e-40 169.1 136 64.7
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 4.5e-40 168.7 133 65.4
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 7.7e-40 167.9 179 53.6
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 7.7e-40 167.9 130 61.5
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 1.3e-39 167.2 140 60.0
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 2.2e-39 166.4 142 58.5
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 2.9e-39 166.0 152 55.9
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 2.9e-39 166.0 162 53.7
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 2.9e-39 166.0 140 58.6
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 2.9e-39 166.0 133 62.4
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 5.0e-39 165.2 147 61.2
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 9.4e-38 161.0 156 55.1
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 1.6e-37 160.2 144 56.2
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 6.1e-37 158.3 113 67.3
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 1.8e-36 156.8 142 53.5
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 3.9e-36 155.6 154 52.6
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 5.1e-36 155.2 174 48.9
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 5.1e-36 155.2 140 54.3
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 1.1e-35 154.1 150 52.7
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 3.3e-35 152.5 159 52.2
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 3.7e-34 149.1 185 49.2
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 1.4e-33 147.1 196 45.9
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 1.8e-33 146.7 173 53.2
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 4.1e-33 145.6 90 74.4
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 2.9e-31 139.4 108 63.9
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 2.9e-31 139.4 159 49.7
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 5.2e-28 128.6 115 50.4
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 9.7e-27 124.4 115 47.0
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 9.7e-27 124.4 115 47.0
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.4e-25 120.6 114 61.4
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 2.2e-23 113.2 110 52.7
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 1.1e-22 110.9 121 44.6
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 2.0e-19 100.1 120 42.5
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 1.7e-15 87.0 51 76.5
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 4.2e-14 82.4 65 58.5
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 1.7e-10 70.5 103 47.6
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 1.8e-09 67.0 147 27.2
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.2e-08 64.3 49 51.0
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 1.0e-07 61.2 102 28.4
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.3e-07 60.8 81 49.4
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 1.5e-06 57.4 115 28.7
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 1.9e-06 57.0 91 29.7
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 3.3e-06 56.2 40 62.5
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 4.3e-06 55.8 52 61.5


User provided reference genes

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