Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 0.0e+00 1197.6 621 100.0
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 2.4e-257 892.1 639 74.0
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 3.1e-252 875.2 639 74.0
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 9.6e-230 800.4 627 67.5
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 9.9e-227 790.4 628 67.4
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 1.3e-226 790.0 628 67.4
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 3.8e-226 788.5 602 68.6
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 2.4e-225 785.8 631 67.7
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.1e-222 776.9 632 66.8
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.5e-222 775.8 631 66.9
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.8e-221 772.3 644 64.8
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 1.5e-219 766.5 624 66.3
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.9e-218 762.3 634 64.7
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 1.1e-217 760.4 649 64.7
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 1.4e-217 760.0 646 62.5
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.2e-217 758.4 629 65.5
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.2e-217 758.4 629 65.5
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 4.2e-217 758.4 635 65.5
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 1.2e-216 756.9 649 64.6
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 5.1e-215 751.5 620 66.3
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 1.1e-212 743.8 656 62.3
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 1.1e-212 743.8 637 64.4
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 1.4e-212 743.4 622 64.8
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 2.4e-212 742.7 639 62.6
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 2.0e-211 739.6 640 62.7
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 1.3e-210 736.9 644 61.3
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 8.4e-210 734.2 642 61.8
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 1.4e-209 733.4 583 65.9
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 3.5e-208 728.8 648 60.2
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 2.3e-207 726.1 636 61.2
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 2.4e-204 716.1 637 60.9
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.2e-203 713.8 645 60.5
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 1.2e-203 713.8 636 61.0
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 6.5e-202 708.0 640 60.9
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 2.5e-201 706.1 637 60.0
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 1.8e-199 699.9 632 62.0
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 8.7e-199 697.6 646 58.7
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 1.1e-198 697.2 575 63.3
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 1.3e-197 693.7 665 58.9
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 1.6e-197 693.3 665 59.1
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 2.2e-197 693.0 620 60.0
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 2.8e-197 692.6 639 60.4
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 3.7e-197 692.2 636 61.3
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 4.8e-197 691.8 652 60.0
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 2.4e-196 689.5 642 60.3
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 6.9e-196 688.0 679 56.7
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 7.7e-195 684.5 636 59.9
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 7.7e-195 684.5 652 58.3
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 2.9e-194 682.6 637 59.2
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 2.9e-194 682.6 636 56.4
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 3.8e-194 682.2 634 60.1
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 8.5e-194 681.0 466 71.5
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 6.1e-192 674.9 637 59.8
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 3.0e-191 672.5 652 57.1
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 3.9e-191 672.2 633 58.0
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 1.1e-190 670.6 649 57.6
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 1.7e-189 666.8 635 57.0
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.8e-189 666.0 639 60.3
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.8e-189 666.0 639 60.3
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 6.3e-189 664.8 641 59.4
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 2.0e-187 659.8 593 58.7
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 2.6e-187 659.4 636 55.8
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 2.2e-186 656.4 477 65.2
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 8.5e-186 654.4 646 57.6
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 1.4e-185 653.7 640 58.8
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 1.9e-185 653.3 611 57.4
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 1.9e-185 653.3 647 57.0
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 3.2e-185 652.5 629 59.8
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 1.2e-184 650.6 635 57.8
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 6.1e-184 648.3 635 58.4
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 2.3e-183 646.4 633 54.5
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 3.9e-183 645.6 631 56.7
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 1.1e-182 644.0 634 54.4
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 2.2e-181 639.8 646 56.5
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 2.2e-181 639.8 613 56.4
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 2.8e-181 639.4 621 56.5
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 4.8e-181 638.6 619 56.5
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 1.4e-180 637.1 652 54.1
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 3.5e-179 632.5 630 56.2
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 1.3e-178 630.6 631 56.4
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 2.2e-178 629.8 617 55.8
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 3.2e-177 625.9 616 56.5
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 5.5e-177 625.2 623 55.7
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 1.6e-176 623.6 641 54.6
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 2.3e-175 619.8 431 69.6
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 1.5e-174 617.1 622 54.5
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 7.4e-174 614.8 471 63.9
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 7.4e-174 614.8 626 51.0
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 5.3e-172 608.6 632 55.7
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 9.4e-169 597.8 623 55.1
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 4.7e-168 595.5 615 55.0
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 1.4e-167 594.0 631 54.2
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 2.6e-166 589.7 545 58.9
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 2.2e-165 586.6 637 52.0
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 1.6e-163 580.5 621 53.1
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 2.0e-163 580.1 633 50.9
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 4.0e-159 565.8 624 51.6
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 8.0e-152 541.6 389 65.3
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 1.6e-139 500.7 628 49.0
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 2.3e-138 496.9 354 67.2
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 4.9e-133 479.2 351 66.1
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 3.3e-121 439.9 507 47.3
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 1.9e-116 424.1 463 47.1
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 2.4e-116 423.7 517 44.3
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 3.9e-114 416.4 607 42.7
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 9.6e-113 411.8 534 43.3
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 3.9e-106 389.8 490 43.3
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 6.3e-80 302.8 558 33.9
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 8.5e-77 292.4 670 29.9
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 6.1e-59 233.0 459 33.3
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 5.9e-46 189.9 485 28.2
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 2.9e-45 187.6 417 30.2
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 4.0e-26 124.0 97 58.8
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 4.0e-26 124.0 97 58.8
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 2.9e-24 117.9 97 56.7
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.4e-18 99.0 297 29.6


User provided reference genes

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