Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G203300 Prunus persica HOM05D007869 ORTHO05D009962 1.3e-185 652.9 325 100.0
RcHm_v2.0_Chr1g0361741 Rosa chinensis HOM05D007869 ORTHO05D009962 7.7e-146 520.8 326 79.4
FAN10G0101 Fragaria x ananassa HOM05D007869 ORTHO05D009962 1.7e-140 503.1 325 76.0
FAN06G2096 Fragaria x ananassa HOM05D007869 ORTHO05D009962 4.8e-140 501.5 325 75.7
FAN03G1443 Fragaria x ananassa HOM05D007869 ORTHO05D009962 2.2e-137 492.7 325 75.1
FAN03G2169 Fragaria x ananassa HOM05D007869 ORTHO05D009962 2.2e-137 492.7 325 75.1
FAN06G3475 Fragaria x ananassa HOM05D007869 ORTHO05D009962 1.5e-125 453.4 284 77.1
Cfa003717 Carpinus fangiana HOM05D007869 ORTHO05D009962 7.2e-120 434.5 310 70.0
Haze_15765 Corylus avellana HOM05D007869 ORTHO05D009962 6.1e-119 431.4 310 69.4
CiPaw.02G045900 Carya illinoinensis HOM05D007869 ORTHO05D009962 1.5e-117 426.8 305 69.5
Manes.05G005500 Manihot esculenta HOM05D007869 ORTHO05D009962 5.4e-115 418.3 303 65.7
CANSAT56G0171 Cannabis sativa HOM05D007869 ORTHO05D009962 2.0e-114 416.4 304 65.8
Atru.chr5.803 Acer truncatum HOM05D007869 ORTHO05D009962 2.2e-113 412.9 309 65.0
Duzib138G0629 Durio zibethinus HOM05D007869 ORTHO05D009962 2.2e-113 412.9 305 66.6
Thecc.01G330400 Theobroma cacao HOM05D007869 ORTHO05D009962 3.2e-112 409.1 305 66.2
FAN10G1242 Fragaria x ananassa HOM05D007869 ORTHO05D009962 4.2e-112 408.7 325 64.0
Ciclev10021277m.g Citrus clementina HOM05D007869 ORTHO05D009962 2.1e-111 406.4 294 68.7
Glyma.09G283900 Glycine max HOM05D007869 ORTHO05D009962 1.2e-109 400.6 304 65.8
FAN01G2503 Fragaria x ananassa HOM05D007869 ORTHO05D009962 2.6e-109 399.4 253 75.9
Glyma.20G001800 Glycine max HOM05D007869 ORTHO05D009962 1.7e-108 396.7 310 63.9
Lalb_Chr04g0258981 Lupinus albus HOM05D007869 ORTHO05D009962 2.8e-108 396.0 302 64.2
Phvul.003G003700 Phaseolus vulgaris HOM05D007869 ORTHO05D009962 4.1e-107 392.1 295 65.8
VMungo0251G2255 Vigna mungo HOM05D007869 ORTHO05D009962 4.1e-107 392.1 324 60.2
TWI14G0946 Tripterygium wilfordii HOM05D007869 ORTHO05D009962 2.0e-106 389.8 312 62.8
TAR374G1227 Trochodendron aralioides HOM05D007869 ORTHO05D009962 2.9e-105 386.0 304 62.2
COL.COLO4_23074 Corchorus olitorius HOM05D007869 ORTHO05D009962 3.3e-104 382.5 297 64.6
Sabra14G0079800 Salix brachista HOM05D007869 ORTHO05D009962 4.3e-104 382.1 307 61.2
Lalb_Chr17g0337801 Lupinus albus HOM05D007869 ORTHO05D009962 9.5e-104 380.9 303 61.4
Sabra02G0132700 Salix brachista HOM05D007869 ORTHO05D009962 2.1e-103 379.8 296 63.2
Lj2g0022280 Lotus japonicus HOM05D007869 ORTHO05D009962 3.6e-103 379.0 316 61.7
Potri.014G108300 Populus trichocarpa HOM05D007869 ORTHO05D009962 1.4e-102 377.1 297 61.3
Medtr1g038260 Medicago truncatula HOM05D007869 ORTHO05D009962 3.7e-100 369.0 321 57.0
Nn3g18755 Nelumbo nucifera HOM05D007869 ORTHO05D009962 1.1e-99 367.5 291 63.6
TPR.G29782 Trifolium pratense HOM05D007869 ORTHO05D009962 1.1e-99 367.5 303 60.1
Cpa.g.sc57.67 Carica papaya HOM05D007869 ORTHO05D009962 1.6e-98 363.6 287 61.3
FvH4_7g18090 Fragaria vesca HOM05D007869 ORTHO05D009962 1.6e-98 363.6 248 74.6
Psat6g099760 Pisum sativum HOM05D007869 ORTHO05D009962 3.6e-95 352.4 286 61.2
Sc01g0002100 Simmondsia chinensis HOM05D007869 ORTHO05D009962 5.8e-93 345.1 285 57.5
Thhalv10009953m.g Eutrema salsugineum HOM05D007869 ORTHO05D009962 2.1e-87 326.6 303 54.8
THA.LOC104825914 Tarenaya hassleriana HOM05D007869 ORTHO05D009962 1.1e-86 324.3 281 55.9
EL10Ac1g00161 Beta vulgaris HOM05D007869 ORTHO05D009962 3.1e-86 322.8 289 56.7
CsaV3_6G008420 Cucumis sativus L. HOM05D007869 ORTHO05D009962 3.1e-86 322.8 280 56.1
ClCG06G002380 Citrullus lanatus HOM05D007869 ORTHO05D009962 2.6e-85 319.7 276 58.3
Sp1g01350 Schrenkiella parvula HOM05D007869 ORTHO05D009962 3.4e-85 319.3 303 55.1
MBI04_g38990_MAGBIO Magnolia biondii HOM05D007869 ORTHO05D009962 7.5e-85 318.2 280 59.3
CARHR001570 Cardamine hirsuta HOM05D007869 ORTHO05D009962 1.3e-84 317.4 310 53.2
BraA10t42381Z Brassica rapa HOM05D007869 ORTHO05D009962 2.2e-84 316.6 310 51.6
A10p01030 Brassica napus HOM05D007869 ORTHO05D009962 4.9e-84 315.5 310 51.0
C05p01060 Brassica napus HOM05D007869 ORTHO05D009962 8.3e-84 314.7 309 51.1
BolC5t28887H Brassica oleracea HOM05D007869 ORTHO05D009962 8.3e-84 314.7 309 50.8
BcaC05g24607 Brassica carinata HOM05D007869 ORTHO05D009962 9.2e-83 311.2 300 51.7
Sed0016589 Sechium edule HOM05D007869 ORTHO05D009962 4.6e-82 308.9 280 57.5
Carub.0001s0129 Capsella rubella HOM05D007869 ORTHO05D009962 3.9e-81 305.8 314 51.3
AUR62023523 Chenopodium quinoa HOM05D007869 ORTHO05D009962 3.3e-80 302.8 286 54.2
Aa31LG1G10230 Aethionema arabicum HOM05D007869 ORTHO05D009962 5.6e-80 302.0 307 50.8
Ah.05g178800 Amaranthus hybridus HOM05D007869 ORTHO05D009962 2.8e-79 299.7 288 53.5
Actinidia28076 Actinidia chinensis HOM05D007869 ORTHO05D009962 3.6e-79 299.3 216 68.5
AUR62004577 Chenopodium quinoa HOM05D007869 ORTHO05D009962 6.8e-78 295.0 286 52.8
AT2G41610 Arabidopsis thaliana HOM05D007869 ORTHO05D009962 3.4e-77 292.7 309 51.1
CSS0017560 Camellia sinensis var. sinensis HOM05D007869 ORTHO05D009962 9.9e-77 291.2 216 67.6
arahy.Tifrunner.gnm1.ann1.2P25JP Arachis hypogaea HOM05D007869 ORTHO05D009962 3.2e-75 286.2 267 53.9
AL4G39680 Arabidopsis lyrata HOM05D007869 ORTHO05D009962 5.4e-75 285.4 311 49.5
arahy.Tifrunner.gnm1.ann1.WBP5Q2 Arachis hypogaea HOM05D007869 ORTHO05D009962 9.2e-75 284.6 266 53.8
Medtr1g038290 Medicago truncatula HOM05D007869 ORTHO05D009962 9.2e-75 284.6 312 48.4
MELO3C022297.2 Cucumis melo HOM05D007869 ORTHO05D009962 2.1e-74 283.5 279 50.9
HPP92_007374 Vanilla planifolia HOM05D007869 ORTHO05D009962 9.6e-72 274.6 286 49.0
PSO384G3553 Papaver somniferum HOM05D007869 ORTHO05D009962 1.1e-70 271.2 372 44.6
ATR0579G134 Amborella trichopoda HOM05D007869 ORTHO05D009962 1.8e-70 270.4 311 45.7
Os03g0253600 Oryza sativa ssp. japonica HOM05D007869 ORTHO05D009962 2.2e-68 263.5 329 42.9
Zm00001eb398460 Zea mays HOM05D007869 ORTHO05D009962 6.4e-68 261.9 302 45.4
Zm00001eb010960 Zea mays HOM05D007869 ORTHO05D009962 4.2e-67 259.2 301 45.2
Gorai.004G148700 Gossypium raimondii HOM05D007869 ORTHO05D009962 1.6e-66 257.3 183 69.4
Gohir.D08G144000 Gossypium hirsutum HOM05D007869 ORTHO05D009962 2.7e-66 256.5 183 69.4
Os10g0200700 Oryza sativa ssp. japonica HOM05D007869 ORTHO05D009962 3.5e-66 256.1 258 50.4
PSO135G1025 Papaver somniferum HOM05D007869 ORTHO05D009962 4.6e-66 255.8 327 46.2
Gohir.A08G122700 Gossypium hirsutum HOM05D007869 ORTHO05D009962 6.0e-66 255.4 183 68.9
FvH4_7g18120 Fragaria vesca HOM05D007869 ORTHO05D009962 1.0e-65 254.6 167 76.0
MBI04_g27772_MAGBIO Magnolia biondii HOM05D007869 ORTHO05D009962 4.8e-63 245.7 227 58.1
Rhsim01G0181500 Rhododendron simsii HOM05D007869 ORTHO05D009962 1.3e-60 237.7 191 62.3
Lju170C22T1 Lonicera japonica HOM05D007869 ORTHO05D009962 2.2e-60 236.9 197 58.4
Dinv32655 Davidia involucrata HOM05D007869 ORTHO05D009962 3.7e-47 193.0 142 64.8
Duzib133G0538 Durio zibethinus HOM05D007869 ORTHO05D009962 1.6e-26 124.4 193 36.8
SEGI_25376 Sequoiadendron giganteum HOM05D007869 ORTHO05D009962 3.2e-11 73.6 135 38.5


User provided reference genes

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