Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G202300 Prunus persica HOM05D005619 ORTHO05D006696 3.0e-102 375.2 186 100.0
Prupe.2G249700 Prunus persica HOM05D005619 ORTHO05D006696 6.6e-102 374.0 186 99.5
MD01G1152600 Malus domestica HOM05D005619 ORTHO05D006696 9.3e-88 327.0 186 86.6
CANSAT56G2799 Cannabis sativa HOM05D005619 ORTHO05D006696 3.4e-82 308.5 186 80.6
RcHm_v2.0_Chr1g0370121 Rosa chinensis HOM05D005619 ORTHO05D006696 4.2e-80 301.6 186 78.5
FAN01G2425 Fragaria x ananassa HOM05D005619 ORTHO05D006696 5.5e-80 301.2 186 78.0
FvH4_7g24440 Fragaria vesca HOM05D005619 ORTHO05D006696 1.2e-79 300.1 186 77.4
FAN10G0566 Fragaria x ananassa HOM05D005619 ORTHO05D006696 1.2e-79 300.1 186 77.4
Sed0003089 Sechium edule HOM05D005619 ORTHO05D006696 4.6e-71 271.6 186 70.4
CsaV3_6G001830 Cucumis sativus L. HOM05D005619 ORTHO05D006696 6.0e-71 271.2 186 71.0
QL08p063145 Quercus lobata HOM05D005619 ORTHO05D006696 1.3e-70 270.0 182 70.9
TAR369G0168 Trochodendron aralioides HOM05D005619 ORTHO05D006696 5.7e-69 264.6 183 69.4
Lj6g0025019 Lotus japonicus HOM05D005619 ORTHO05D006696 2.2e-68 262.7 186 67.2
THA.LOC104824313 Tarenaya hassleriana HOM05D005619 ORTHO05D006696 2.2e-68 262.7 183 68.3
AT1G19080 Arabidopsis thaliana HOM05D005619 ORTHO05D006696 1.1e-67 260.4 186 66.7
AT3G55490 Arabidopsis thaliana HOM05D005619 ORTHO05D006696 1.1e-67 260.4 186 66.7
Nn2g11500 Nelumbo nucifera HOM05D005619 ORTHO05D006696 1.4e-67 260.0 182 65.9
Lj1g0018800 Lotus japonicus HOM05D005619 ORTHO05D006696 2.4e-67 259.2 186 65.6
Thhalv10017287m.g Eutrema salsugineum HOM05D005619 ORTHO05D006696 3.1e-67 258.8 184 66.8
Thecc.10G016900 Theobroma cacao HOM05D005619 ORTHO05D006696 3.1e-67 258.8 182 69.8
Atru.chr12.29 Acer truncatum HOM05D005619 ORTHO05D006696 4.1e-67 258.5 181 67.4
CARHR135030 Cardamine hirsuta HOM05D005619 ORTHO05D006696 4.1e-67 258.5 186 66.7
Cpa.g.sc19.176 Carica papaya HOM05D005619 ORTHO05D006696 4.1e-67 258.5 186 67.2
CARHR165540 Cardamine hirsuta HOM05D005619 ORTHO05D006696 5.3e-67 258.1 186 65.6
ClCG11G006160 Citrullus lanatus HOM05D005619 ORTHO05D006696 5.3e-67 258.1 186 68.8
AL5G36640 Arabidopsis lyrata HOM05D005619 ORTHO05D006696 6.9e-67 257.7 186 65.6
Carub.0005s2221 Capsella rubella HOM05D005619 ORTHO05D006696 1.5e-66 256.5 186 65.1
GSVIVG01032822001 Vitis vinifera HOM05D005619 ORTHO05D006696 2.0e-66 256.1 187 68.4
Duzib114G0170 Durio zibethinus HOM05D005619 ORTHO05D006696 3.4e-66 255.4 182 68.7
Sabra08G0050000 Salix brachista HOM05D005619 ORTHO05D006696 3.4e-66 255.4 186 67.2
Sp4g22380 Schrenkiella parvula HOM05D005619 ORTHO05D006696 4.5e-66 255.0 184 65.8
Gohir.A06G163800 Gossypium hirsutum HOM05D005619 ORTHO05D006696 1.0e-65 253.8 182 68.1
Gohir.D06G169500 Gossypium hirsutum HOM05D005619 ORTHO05D006696 1.0e-65 253.8 182 68.1
Gorai.010G198200 Gossypium raimondii HOM05D005619 ORTHO05D006696 1.0e-65 253.8 182 68.1
Psat5g128520 Pisum sativum HOM05D005619 ORTHO05D006696 1.0e-65 253.8 186 66.1
Duzib128G1619 Durio zibethinus HOM05D005619 ORTHO05D006696 1.3e-65 253.4 182 68.7
Lj3A878T24 Lonicera japonica HOM05D005619 ORTHO05D006696 1.3e-65 253.4 183 66.7
Manes.04G157300 Manihot esculenta HOM05D005619 ORTHO05D006696 1.3e-65 253.4 186 66.7
Medtr3g070470 Medicago truncatula HOM05D005619 ORTHO05D006696 1.3e-65 253.4 183 67.2
Potri.008G068100 Populus trichocarpa HOM05D005619 ORTHO05D006696 1.3e-65 253.4 186 67.2
Aqoxy4G02564 Aquilegia oxysepala HOM05D005619 ORTHO05D006696 2.9e-65 252.3 187 64.7
TPR.G16245 Trifolium pratense HOM05D005619 ORTHO05D006696 3.8e-65 251.9 188 66.0
arahy.Tifrunner.gnm1.ann1.IDH5I9 Arachis hypogaea HOM05D005619 ORTHO05D006696 5.0e-65 251.5 186 64.5
Lalb_Chr03g0027081 Lupinus albus HOM05D005619 ORTHO05D006696 5.0e-65 251.5 186 64.5
Hund13861 Selenicereus undatus HOM05D005619 ORTHO05D006696 5.0e-65 251.5 183 66.1
Dinv16155 Davidia involucrata HOM05D005619 ORTHO05D006696 6.5e-65 251.1 183 67.8
arahy.Tifrunner.gnm1.ann1.2YL4XG Arachis hypogaea HOM05D005619 ORTHO05D006696 8.5e-65 250.8 186 64.5
Glyma.18G027600 Glycine max HOM05D005619 ORTHO05D006696 1.1e-64 250.4 182 67.0
Phvul.001G242800 Phaseolus vulgaris HOM05D005619 ORTHO05D006696 2.5e-64 249.2 186 63.4
Potri.010G189200 Populus trichocarpa HOM05D005619 ORTHO05D006696 2.5e-64 249.2 186 66.7
Sc11g0001040 Simmondsia chinensis HOM05D005619 ORTHO05D006696 2.5e-64 249.2 183 66.1
VMungo1383G0062 Vigna mungo HOM05D005619 ORTHO05D006696 2.5e-64 249.2 179 64.8
PGR142G0483 Punica granatum HOM05D005619 ORTHO05D006696 9.4e-64 247.3 186 64.5
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 1.2e-63 246.9 182 68.7
Glyma.11G229600 Glycine max HOM05D005619 ORTHO05D006696 1.6e-63 246.5 182 65.4
BcaNung05464 Brassica carinata HOM05D005619 ORTHO05D006696 2.7e-63 245.7 184 64.1
BraA04t18498Z Brassica rapa HOM05D005619 ORTHO05D006696 2.7e-63 245.7 184 64.1
Aqoxy5G02842 Aquilegia oxysepala HOM05D005619 ORTHO05D006696 3.6e-63 245.4 183 64.5
AUR62034382 Chenopodium quinoa HOM05D005619 ORTHO05D006696 4.6e-63 245.0 182 64.3
Ciclev10033435m.g Citrus clementina HOM05D005619 ORTHO05D006696 4.6e-63 245.0 166 69.9
A04p30090 Brassica napus HOM05D005619 ORTHO05D006696 6.1e-63 244.6 181 64.6
AUR62022323 Chenopodium quinoa HOM05D005619 ORTHO05D006696 6.1e-63 244.6 182 64.8
Eucgr.G03057 Eucalyptus grandis HOM05D005619 ORTHO05D006696 7.9e-63 244.2 182 65.4
Haze_17223 Corylus avellana HOM05D005619 ORTHO05D006696 1.4e-62 243.4 182 65.4
Cfa001322 Carpinus fangiana HOM05D005619 ORTHO05D006696 2.3e-62 242.7 182 65.4
FAN06G3728 Fragaria x ananassa HOM05D005619 ORTHO05D006696 3.0e-62 242.3 149 75.8
HanXRQChr08g0213181 Helianthus annuus HOM05D005619 ORTHO05D006696 3.0e-62 242.3 182 63.7
HanXRQChr15g0468911 Helianthus annuus HOM05D005619 ORTHO05D006696 3.0e-62 242.3 182 63.7
MBI05_g05306_MAGBIO Magnolia biondii HOM05D005619 ORTHO05D006696 5.1e-62 241.5 185 62.7
CiPaw.08G091200 Carya illinoinensis HOM05D005619 ORTHO05D006696 8.8e-62 240.7 186 63.4
Lsat_1_v5_gn_8_41961 Lactuca sativa HOM05D005619 ORTHO05D006696 1.5e-61 240.0 182 63.7
EL10Ac2g04534 Beta vulgaris HOM05D005619 ORTHO05D006696 2.0e-61 239.6 187 62.6
ECA233G2873 Erigeron canadensis HOM05D005619 ORTHO05D006696 2.0e-61 239.6 182 63.2
PSO339G2325 Papaver somniferum HOM05D005619 ORTHO05D006696 2.0e-61 239.6 183 62.3
BolC4t28280H Brassica oleracea HOM05D005619 ORTHO05D006696 2.5e-61 239.2 181 63.5
Hma1.2p1_2256F.1_g318210 Hydrangea macrophylla HOM05D005619 ORTHO05D006696 2.5e-61 239.2 183 65.0
ECA247G2146 Erigeron canadensis HOM05D005619 ORTHO05D006696 5.7e-61 238.0 182 64.3
Actinidia31994 Actinidia chinensis HOM05D005619 ORTHO05D006696 7.4e-61 237.7 187 63.1
BcaC02g07350 Brassica carinata HOM05D005619 ORTHO05D006696 7.4e-61 237.7 183 62.8
C04p67770 Brassica napus HOM05D005619 ORTHO05D006696 9.7e-61 237.3 181 63.5
CiPaw.02G192300 Carya illinoinensis HOM05D000781 ORTHO05D000643 1.7e-60 236.5 178 64.6
HanXRQChr09g0271791 Helianthus annuus HOM05D005619 ORTHO05D006696 2.8e-60 235.7 182 62.1
TWI53G0619 Tripterygium wilfordii HOM05D005619 ORTHO05D006696 6.3e-60 234.6 169 67.5
DCAR_026757 Daucus carota HOM05D005619 ORTHO05D006696 8.2e-60 234.2 187 62.6
CSS0006168 Camellia sinensis var. sinensis HOM05D005619 ORTHO05D006696 1.2e-58 230.3 183 61.7
MSTRG.870 Avicennia marina HOM05D005619 ORTHO05D006696 2.6e-58 229.2 187 61.5
Oeu057772.1 Olea europaea HOM05D005619 ORTHO05D006696 2.2e-57 226.1 185 61.1
Lalb_Chr01g0004131 Lupinus albus HOM05D005619 ORTHO05D006696 3.8e-57 225.3 203 55.7
CDE04G2394 Ceratophyllum demersum HOM05D005619 ORTHO05D006696 9.4e-56 220.7 180 58.3
BcaC02g07392 Brassica carinata HOM05D005619 ORTHO05D006696 1.2e-55 220.3 167 63.5
SalBow8G4625 Salvia bowleyana HOM05D005619 ORTHO05D006696 1.2e-55 220.3 185 60.5
Migut.E00386 Erythranthe guttata HOM05D005619 ORTHO05D006696 1.6e-55 219.9 185 58.9
unitig_52.g17125 Utricularia gibba HOM05D005619 ORTHO05D006696 4.7e-55 218.4 185 58.9
Solyc05g008620.4 Solanum lycopersicum HOM05D005619 ORTHO05D006696 6.1e-55 218.0 185 60.5
Sopen05g004460 Solanum pennellii HOM05D005619 ORTHO05D006696 6.1e-55 218.0 185 60.5
COL.COLO4_25718 Corchorus olitorius HOM05D005619 ORTHO05D006696 1.0e-54 217.2 182 63.2
CAN.G1489.22 Capsicum annuum HOM05D005619 ORTHO05D006696 1.4e-54 216.9 185 60.5
PGSC0003DMG400030566 Solanum tuberosum HOM05D005619 ORTHO05D006696 3.0e-54 215.7 185 59.5
ATR0481G004 Amborella trichopoda HOM05D005619 ORTHO05D006696 5.1e-54 214.9 183 57.9
Peaxi162Scf00451g00930 Petunia axillaris HOM05D005619 ORTHO05D006696 8.8e-54 214.2 185 58.4
Cc03_g10740 Coffea canephora HOM05D005619 ORTHO05D006696 4.4e-53 211.8 185 58.9
Zm00001eb412290 Zea mays HOM05D005619 ORTHO05D006696 1.7e-52 209.9 184 53.8
TAR633G2706 Trochodendron aralioides HOM05D005619 ORTHO05D006696 2.2e-52 209.5 150 66.7
SGA_v2.0_scaffold170G38815 Striga asiatica HOM05D005619 ORTHO05D006696 2.8e-52 209.1 185 56.2
HPP92_000422 Vanilla planifolia HOM05D000755 ORTHO05D006696 3.7e-52 208.8 183 56.3
Os08g0274700 Oryza sativa ssp. japonica HOM05D005619 ORTHO05D006696 8.2e-52 207.6 184 55.4
HPP92_000355 Vanilla planifolia HOM05D000755 ORTHO05D000642 1.4e-51 206.8 183 55.7
Zm00001eb198650 Zea mays HOM05D005619 ORTHO05D006696 4.1e-51 205.3 184 53.8
TWI73G0774 Tripterygium wilfordii HOM05D005619 ORTHO05D006696 3.5e-50 202.2 184 57.1
FAN06G2505 Fragaria x ananassa HOM05D005619 ORTHO05D006696 5.9e-50 201.4 149 67.1
MELO3C029903.2 Cucumis melo HOM05D005619 ORTHO05D006696 3.2e-48 195.7 200 57.0
SMO356G0622 Selaginella moellendorffii HOM05D005619 ORTHO05D006696 3.2e-48 195.7 183 54.1
SalBow8G2997 Salvia bowleyana HOM05D005619 ORTHO05D006696 2.0e-45 186.4 203 52.2
DCAR_023625 Daucus carota HOM05D005619 ORTHO05D006696 5.7e-45 184.9 148 60.1
Nitab4.5_0000350g0020 Nicotiana tabacum HOM05D005619 ORTHO05D006696 5.7e-45 184.9 184 54.3
CSS0006460 Camellia sinensis var. sinensis HOM05D005619 ORTHO05D006696 3.7e-44 182.2 187 54.0
Pp3c25_12660 Physcomitrium patens HOM05D005619 ORTHO05D006696 8.2e-44 181.0 182 48.4
Mapoly0034s0059 Marchantia polymorpha HOM05D005619 ORTHO05D006696 1.8e-43 179.9 183 49.2
Peaxi162Scf00205g01136 Petunia axillaris HOM05D005619 ORTHO05D006696 7.0e-43 177.9 146 59.6
Sabra10G0145900 Salix brachista HOM05D005619 ORTHO05D006696 1.6e-42 176.8 186 54.3
Cc03_g13530 Coffea canephora HOM05D005619 ORTHO05D006696 2.0e-42 176.4 166 56.0
Mapoly0053s0030 Marchantia polymorpha HOM05D005619 ORTHO05D006696 7.7e-42 174.5 183 47.5
C04p07340 Brassica napus HOM05D004515 ORTHO05D006013 1.3e-41 173.7 164 56.1
AagrBONN_evm.TU.Sc2ySwM_228.5247 Anthoceros agrestis HOM05D005619 ORTHO05D006696 2.3e-38 162.9 183 47.0
Nitab4.5_0003886g0110 Nicotiana tabacum HOM05D005619 ORTHO05D006696 6.7e-38 161.4 183 49.2
CBR_g38120 Chara braunii HOM05D005619 ORTHO05D006696 1.7e-36 156.8 185 40.5
AagrBONN_evm.TU.Sc2ySwM_344.729 Anthoceros agrestis HOM05D005619 ORTHO05D006696 2.8e-36 156.0 183 44.3
Aa31LG5G19540 Aethionema arabicum HOM05D005619 ORTHO05D006696 1.1e-35 154.1 103 66.0
CARHR159370 Cardamine hirsuta HOM05D005619 ORTHO05D006696 2.7e-34 149.4 112 58.9
BolC4t22357H Brassica oleracea HOM05D004515 ORTHO05D006013 3.7e-28 129.0 161 44.1
ATR0568G146 Amborella trichopoda HOM05D005619 ORTHO05D006696 6.6e-25 118.2 117 53.0
MCO08G248 Micromonas commoda HOM05D005619 ORTHO05D006696 2.0e-21 106.7 167 35.9
BcaB08g35316 Brassica carinata HOM05D005619 ORTHO05D006696 4.9e-20 102.1 71 63.4
AagrBONN_evm.TU.Sc2ySwM_344.737 Anthoceros agrestis HOM05D005619 ORTHO05D006696 8.3e-20 101.3 104 47.1
C04p07380 Brassica napus HOM05D005619 ORTHO05D006696 2.4e-19 99.8 89 56.2
Actinidia33632 Actinidia chinensis HOM05D005619 ORTHO05D006696 1.2e-18 97.4 98 54.1
HanXRQChr01g0017101 Helianthus annuus HOM05D005619 ORTHO05D006696 2.9e-17 92.8 62 66.1
HanXRQChr12g0375531 Helianthus annuus HOM05D005619 ORTHO05D006696 2.8e-15 86.3 72 54.2
Thecc.10G017600 Theobroma cacao HOM05D009631 ORTHO05D011824 2.8e-15 86.3 79 63.3
Cfa027228 Carpinus fangiana HOM05D005619 ORTHO05D006696 3.4e-13 79.3 176 30.1
PRCOL_00002083 Prasinoderma coloniale HOM05D005619 ORTHO05D006696 4.3e-08 62.4 142 30.3


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