Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G194700 Prunus persica HOM05D009029 ORTHO05D009596 7.7e-76 287.0 135 100.0
MD01G1086400 Malus domestica HOM05D009029 ORTHO05D009596 7.6e-39 164.1 129 58.9
Prupe.2G194800 Prunus persica HOM05D016369 ORTHO05D009596 5.2e-32 141.4 106 63.2
Carub.0006s1554 Capsella rubella HOM05D009029 ORTHO05D009596 2.4e-16 89.4 97 45.4
CARHR195880 Cardamine hirsuta HOM05D009029 ORTHO05D009596 7.6e-15 84.3 97 43.3
AL6G28410 Arabidopsis lyrata HOM05D009029 ORTHO05D009596 1.3e-14 83.6 99 41.4
Carub.0006s1555 Capsella rubella HOM05D009029 ORTHO05D009596 1.3e-14 83.6 99 42.4
THA.LOC104827231 Tarenaya hassleriana HOM05D009029 ORTHO05D009596 1.3e-14 83.6 94 38.3
FvH4_1g21720 Fragaria vesca HOM05D016369 ORTHO05D010793 6.4e-14 81.3 70 47.1
AT5G17340 Arabidopsis thaliana HOM05D009029 ORTHO05D009596 1.1e-13 80.5 99 40.4
Thhalv10014860m.g Eutrema salsugineum HOM05D009029 ORTHO05D009596 1.1e-13 80.5 101 36.6
FAN19G2732 Fragaria x ananassa HOM05D016369 ORTHO05D010793 1.4e-13 80.1 70 47.1
Sp6g26880 Schrenkiella parvula HOM05D009029 ORTHO05D009596 1.9e-13 79.7 106 35.8
THA.LOC104820858 Tarenaya hassleriana HOM05D009029 ORTHO05D009596 1.9e-13 79.7 94 39.4
CARHR195870 Cardamine hirsuta HOM05D009029 ORTHO05D009596 2.4e-13 79.3 104 40.4
FAN23G0849 Fragaria x ananassa HOM05D016369 ORTHO05D009596 3.2e-13 79.0 70 47.1
BcaC03g18552 Brassica carinata HOM05D009029 ORTHO05D009596 2.1e-12 76.3 101 38.6
A02p04140 Brassica napus HOM05D009029 ORTHO05D009596 2.1e-12 76.3 101 38.6
C02p08990 Brassica napus HOM05D009029 ORTHO05D009596 2.1e-12 76.3 101 38.6
BolC2t06808H Brassica oleracea HOM05D009029 ORTHO05D009596 2.1e-12 76.3 101 38.6
BcaB05g23261 Brassica carinata HOM05D009029 ORTHO05D009596 6.0e-12 74.7 102 37.3
BraA02t05377Z Brassica rapa HOM05D009029 ORTHO05D009596 6.0e-12 74.7 101 37.6
Duzib093G1752 Durio zibethinus HOM05D020091 ORTHO05D009596 6.0e-12 74.7 137 35.8
TWI63G0916 Tripterygium wilfordii HOM05D012509 ORTHO05D009596 1.3e-11 73.6 98 36.7
BcaB08g36781 Brassica carinata HOM05D009029 ORTHO05D009596 1.8e-11 73.2 101 35.6
BcaB08g36782 Brassica carinata HOM05D009029 ORTHO05D009596 1.6e-09 66.6 96 33.3
BraA10t44265Z Brassica rapa HOM05D009029 ORTHO05D009596 1.6e-09 66.6 78 37.2
Aqoxy3G03256 Aquilegia oxysepala HOM05D020091 ORTHO05D009596 2.1e-09 66.2 90 41.1
SpUn0004_0070 Schrenkiella parvula HOM05D009160 ORTHO05D009596 1.4e-08 63.5 91 36.3
SpUn0066_0020 Schrenkiella parvula HOM05D009160 ORTHO05D009596 1.4e-08 63.5 91 36.3
CiPaw.13G108500 Carya illinoinensis HOM05D016369 ORTHO05D009596 1.8e-08 63.2 106 33.0
Sp3g02310 Schrenkiella parvula HOM05D012509 ORTHO05D009596 3.1e-08 62.4 53 47.2
AT3G03272 Arabidopsis thaliana HOM05D012509 ORTHO05D009596 9.0e-08 60.8 112 32.1
Carub.0001s3513 Capsella rubella HOM05D009395 ORTHO05D011539 1.2e-07 60.5 90 33.3
Sp6g26890 Schrenkiella parvula HOM05D009160 ORTHO05D009596 1.2e-07 60.5 108 36.1
AL3G12880 Arabidopsis lyrata HOM05D012509 ORTHO05D009596 3.4e-07 58.9 53 41.5
Manes.09G050014 Manihot esculenta HOM05D031338 ORTHO05D009596 3.4e-07 58.9 72 33.3
BcaC01g04403 Brassica carinata HOM05D012509 ORTHO05D009596 5.8e-07 58.2 53 43.4
BcaC01g04408 Brassica carinata HOM05D012509 ORTHO05D009596 5.8e-07 58.2 53 43.4
A03p33250 Brassica napus HOM05D012509 ORTHO05D009596 5.8e-07 58.2 53 43.4
BolC3t16315H Brassica oleracea HOM05D012509 ORTHO05D009596 5.8e-07 58.2 53 43.4
BraA03t12497Z Brassica rapa HOM05D012509 ORTHO05D009596 5.8e-07 58.2 53 43.4
BcaC04g18801 Brassica carinata HOM05D009029 ORTHO05D009596 1.0e-06 57.4 106 32.1
CARHR077300 Cardamine hirsuta HOM05D012509 ORTHO05D009596 1.3e-06 57.0 63 39.7
Thhalv10015780m.g Eutrema salsugineum HOM05D009160 ORTHO05D009596 1.3e-06 57.0 126 34.1
BcaB04g19371 Brassica carinata HOM05D012509 ORTHO05D009596 1.7e-06 56.6 53 43.4
Carub.0003s0243 Capsella rubella HOM05D012509 ORTHO05D009596 1.7e-06 56.6 53 39.6
Aa31LG11G12340 Aethionema arabicum HOM05D009029 ORTHO05D009596 3.8e-06 55.5 105 31.4
Sc06g0008660 Simmondsia chinensis HOM05D016369 ORTHO05D009596 4.9e-06 55.1 101 32.7
AUR62001540 Chenopodium quinoa HOM05D000204 ORTHO05D010030 6.5e-06 54.7 93 31.2
Aa31LG11G12230 Aethionema arabicum HOM05D009029 ORTHO05D009596 8.4e-06 54.3 105 30.5
THA.LOC104806833 Tarenaya hassleriana HOM05D009838 ORTHO05D012149 8.4e-06 54.3 69 33.3


User provided reference genes

Program Settings