Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 6.7e-116 420.6 201 100.0
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 4.3e-99 364.8 201 86.6
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 3.1e-97 358.6 201 83.6
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 6.9e-97 357.5 201 84.1
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 6.9e-97 357.5 201 84.1
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 5.0e-95 351.3 201 81.6
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 3.6e-93 345.1 201 82.1
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.0e-92 343.6 219 76.7
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 3.3e-91 338.6 197 79.2
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 3.1e-89 332.0 201 75.6
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 1.0e-87 327.0 201 76.1
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 2.5e-86 322.4 199 74.4
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 9.4e-86 320.5 197 74.1
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 1.2e-85 320.1 201 70.6
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 2.7e-85 318.9 202 74.3
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 4.7e-85 318.2 201 77.6
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 6.1e-85 317.8 201 76.1
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 6.1e-85 317.8 201 72.6
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 1.8e-84 316.2 202 73.8
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 1.8e-84 316.2 202 73.8
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 5.2e-84 314.7 196 76.0
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 1.1e-83 313.5 193 72.0
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 4.4e-83 311.6 201 73.1
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 5.7e-83 311.2 201 71.1
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 7.4e-83 310.8 195 73.3
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 4.8e-82 308.1 202 72.8
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 4.8e-82 308.1 197 71.1
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 4.8e-82 308.1 191 75.4
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 4.8e-82 308.1 191 75.4
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 6.3e-82 307.8 195 74.9
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 1.4e-81 306.6 202 72.3
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 1.8e-81 306.2 198 70.2
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 3.1e-81 305.4 196 71.9
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 4.1e-81 305.1 201 70.1
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 5.3e-81 304.7 200 73.5
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 9.1e-81 303.9 201 70.1
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 1.2e-80 303.5 197 69.5
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 1.2e-80 303.5 169 84.0
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 5.9e-80 301.2 196 70.9
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 1.0e-79 300.4 202 71.8
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 1.0e-79 300.4 201 70.1
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 1.0e-79 300.4 201 70.1
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 1.3e-79 300.1 201 70.1
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 1.7e-79 299.7 201 70.6
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 2.9e-79 298.9 197 69.0
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 2.9e-79 298.9 201 68.7
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 5.0e-79 298.1 201 70.6
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 8.5e-79 297.4 198 68.2
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 1.5e-78 296.6 190 72.6
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 1.9e-78 296.2 192 70.8
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 4.2e-78 295.0 192 72.9
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 5.5e-78 294.7 203 70.4
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 7.2e-78 294.3 190 72.1
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 2.1e-77 292.7 197 67.0
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 2.7e-77 292.4 192 71.9
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 8.0e-77 290.8 197 68.0
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 1.0e-76 290.4 197 67.0
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 1.4e-76 290.0 197 66.5
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 1.4e-76 290.0 197 66.5
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 3.0e-76 288.9 197 67.0
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 5.2e-76 288.1 193 69.4
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 1.2e-75 287.0 197 65.5
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 2.6e-75 285.8 201 66.2
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 2.6e-75 285.8 198 66.7
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 5.7e-75 284.6 197 65.0
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 1.7e-74 283.1 194 66.5
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 2.8e-74 282.3 193 66.3
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 6.3e-74 281.2 192 66.7
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 6.3e-74 281.2 200 66.0
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 2.4e-73 279.3 168 76.8
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 2.0e-72 276.2 191 66.5
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 2.7e-72 275.8 169 72.8
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 5.9e-72 274.6 164 75.6
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 2.9e-71 272.3 186 66.1
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 6.5e-71 271.2 184 66.8
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 1.1e-70 270.4 194 63.4
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 1.5e-70 270.0 193 62.2
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 1.9e-70 269.6 200 63.0
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 3.6e-69 265.4 197 61.9
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 4.7e-69 265.0 195 61.0
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 6.1e-69 264.6 156 77.6
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.8e-68 263.1 166 75.9
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 3.0e-68 262.3 198 59.6
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 9.8e-67 257.3 199 61.3
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 1.4e-65 253.4 165 68.5
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 1.4e-65 253.4 167 71.3
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 9.1e-65 250.8 194 56.7
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 1.6e-64 250.0 161 69.6
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 7.7e-64 247.7 197 59.4
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 1.0e-63 247.3 196 60.2
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 1.4e-60 236.9 168 69.6
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 1.8e-60 236.5 219 52.1
Rhsim01G0174600 Rhododendron simsii HOM05D000026 ORTHO05D008596 6.8e-60 234.6 194 58.8
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 4.4e-59 231.9 194 58.8
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 9.5e-54 214.2 133 73.7
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 9.5e-54 214.2 133 73.7
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 1.2e-53 213.8 193 50.8
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 2.1e-53 213.0 203 50.2
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 4.7e-53 211.8 195 49.7
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 1.0e-52 210.7 196 46.9
Oeu004961.1 Olea europaea HOM05D000026 ORTHO05D008596 2.0e-51 206.5 132 67.4
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 5.4e-49 198.4 192 52.6
Sabra14G0074100 Salix brachista HOM05D000026 ORTHO05D008596 6.6e-47 191.4 173 56.1
Sc01g0002470 Simmondsia chinensis HOM05D000026 ORTHO05D008596 3.3e-46 189.1 109 78.0
Peaxi162Scf00716g00425 Petunia axillaris HOM05D000026 ORTHO05D008596 3.4e-43 179.1 194 45.9
CBR_g3312 Chara braunii HOM05D000026 ORTHO05D008596 3.5e-40 169.1 221 40.7
ClCG05G000710 Citrullus lanatus HOM05D000026 ORTHO05D008596 1.5e-35 153.7 273 36.3
Hma1.2p1_0101F.1_g049160 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 2.0e-35 153.3 92 75.0
Actinidia28403 Actinidia chinensis HOM05D000026 ORTHO05D008596 1.9e-33 146.7 82 79.3
AUR62022739 Chenopodium quinoa HOM05D000026 ORTHO05D008596 1.5e-30 137.1 92 67.4
HPP92_015098 Vanilla planifolia HOM05D000026 ORTHO05D008596 1.5e-27 127.1 111 55.9
ATR0757G161 Amborella trichopoda HOM05D000026 ORTHO05D008596 1.4e-25 120.6 79 69.6
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 7.1e-25 118.2 179 35.8
Sabra02G0139600 Salix brachista HOM05D000026 ORTHO05D008596 2.4e-20 103.2 70 67.1
PRCOL_00000497 Prasinoderma coloniale HOM05D000026 ORTHO05D008596 2.7e-16 89.7 229 30.6
Hund19453 Selenicereus undatus HOM05D004066 ORTHO05D008596 1.5e-14 84.0 53 67.9
Cre02.g095100 Chlamydomonas reinhardtii HOM05D000026 ORTHO05D008596 5.6e-14 82.0 138 34.1
Zm00001eb244850 Zea mays HOM05D017471 ORTHO05D012887 2.1e-13 80.1 58 62.1
TAR636G3419 Trochodendron aralioides HOM05D000026 ORTHO05D008596 6.2e-13 78.6 62 61.3
Zm00001eb123990 Zea mays HOM05D000026 ORTHO05D012887 3.1e-12 76.3 57 61.4
Haze_15680 Corylus avellana HOM05D000026 ORTHO05D008596 9.0e-12 74.7 49 75.5


User provided reference genes

Program Settings