Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G184600 Prunus persica HOM05D008687 ORTHO05D010822 7.1e-22 106.3 51 100.0
MD01G1077100 Malus domestica HOM05D008687 ORTHO05D010822 3.2e-14 80.9 52 75.0
RcHm_v2.0_Chr1g0359021 Rosa chinensis HOM05D008687 ORTHO05D010822 7.1e-14 79.7 52 71.2
MD07G1146600 Malus domestica HOM05D008687 ORTHO05D010822 4.6e-13 77.0 52 75.0
Migut.B01844 Erythranthe guttata HOM05D008687 ORTHO05D010822 2.5e-11 71.2 52 63.5
Hma1.2p1_0384F.1_g141170 Hydrangea macrophylla HOM05D008687 ORTHO05D010822 3.3e-11 70.9 52 65.4
CSS0023630 Camellia sinensis var. sinensis HOM05D008687 ORTHO05D010822 7.3e-11 69.7 52 63.5
TAR374G0349 Trochodendron aralioides HOM05D008687 ORTHO05D010822 1.3e-10 68.9 52 63.5
Manes.01G247900 Manihot esculenta HOM05D008687 ORTHO05D010822 8.1e-10 66.2 52 63.5
Nitab4.5_0002247g0150 Nicotiana tabacum HOM05D008687 ORTHO05D010822 2.4e-09 64.7 51 56.9
Solyc01g097020.4 Solanum lycopersicum HOM05D008687 ORTHO05D010822 2.4e-09 64.7 51 56.9
Potri.014G095901 Populus trichocarpa HOM05D008687 ORTHO05D010822 6.9e-09 63.2 51 56.9
Thecc.01G345800 Theobroma cacao HOM05D008687 ORTHO05D010822 6.9e-09 63.2 51 54.9
CiPaw.01G073700 Carya illinoinensis HOM05D008687 ORTHO05D010822 9.0e-09 62.8 51 60.8
Nn1g02205 Nelumbo nucifera HOM05D008687 ORTHO05D010822 1.2e-08 62.4 41 65.9
Nitab4.5_0006420g0050 Nicotiana tabacum HOM05D008687 ORTHO05D010822 1.2e-08 62.4 50 54.0
Nn4g26235 Nelumbo nucifera HOM05D008687 ORTHO05D010822 1.5e-08 62.0 50 60.0
Sc01g0002900 Simmondsia chinensis HOM05D008687 ORTHO05D010822 2.0e-08 61.6 52 59.6
Gorai.001G156200 Gossypium raimondii HOM05D008687 ORTHO05D010822 3.4e-08 60.8 49 53.1
Lalb_Chr10g0100361 Lupinus albus HOM05D008687 ORTHO05D010822 5.8e-08 60.1 52 53.8
Manes.05G025100 Manihot esculenta HOM05D008687 ORTHO05D010822 5.8e-08 60.1 52 55.8
Gohir.D07G144200 Gossypium hirsutum HOM05D008687 ORTHO05D010822 9.9e-08 59.3 44 54.5
Gohir.A11G095700 Gossypium hirsutum HOM05D008687 ORTHO05D010822 1.3e-07 58.9 51 51.0
Gohir.D11G100600 Gossypium hirsutum HOM05D008687 ORTHO05D010822 1.3e-07 58.9 51 51.0
Gorai.007G106900 Gossypium raimondii HOM05D008687 ORTHO05D010822 1.3e-07 58.9 51 51.0
Cc02_g39090 Coffea canephora HOM05D008687 ORTHO05D010822 2.2e-07 58.2 33 81.8
Lalb_Chr17g0342441 Lupinus albus HOM05D008687 ORTHO05D010822 2.2e-07 58.2 52 51.9
FAN10G1050 Fragaria x ananassa HOM05D036424 ORTHO05D010822 2.9e-07 57.8 33 75.8
FAN10G4301 Fragaria x ananassa HOM05D036424 ORTHO05D010822 2.9e-07 57.8 33 75.8
Glyma.07G057502 Glycine max HOM05D008687 ORTHO05D010822 2.9e-07 57.8 52 51.9
TPR.G20504 Trifolium pratense HOM05D008687 ORTHO05D010822 2.9e-07 57.8 52 51.9
FAN03G1283 Fragaria x ananassa HOM05D008687 ORTHO05D010822 3.8e-07 57.4 38 65.8
FAN06G2082 Fragaria x ananassa HOM05D036424 ORTHO05D010822 3.8e-07 57.4 39 64.1
COL.COLO4_06317 Corchorus olitorius HOM05D008687 ORTHO05D010822 4.9e-07 57.0 51 45.1
Gohir.A07G139100 Gossypium hirsutum HOM05D008687 ORTHO05D010822 4.9e-07 57.0 46 58.7
unitig_52.g17066 Utricularia gibba HOM05D008687 ORTHO05D010822 6.4e-07 56.6 39 59.0
Phvul.010G111800 Phaseolus vulgaris HOM05D008687 ORTHO05D010822 8.4e-07 56.2 52 48.1
Psat4g160200 Pisum sativum HOM05D008687 ORTHO05D010822 1.4e-06 55.5 52 48.1
Ca_26755_v3 Cicer arietinum L. HOM05D008687 ORTHO05D010822 3.2e-06 54.3 34 64.7
Glyma.16G026500 Glycine max HOM05D008687 ORTHO05D010822 9.3e-06 52.8 52 46.2


User provided reference genes

Program Settings