Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G183300 Prunus persica HOM05D008545 ORTHO05D010341 5.0e-131 471.1 233 100.0
MD07G1144400 Malus domestica HOM05D008545 ORTHO05D010341 7.3e-74 281.2 220 68.6
RcHm_v2.0_Chr1g0358691 Rosa chinensis HOM05D008545 ORTHO05D010341 4.6e-60 235.3 213 62.0
FAN06G5050 Fragaria x ananassa HOM05D008545 ORTHO05D010341 7.4e-58 228.0 215 60.0
FvH4_7g15870 Fragaria vesca HOM05D008545 ORTHO05D010341 1.3e-57 227.3 215 60.0
FAN10G0919 Fragaria x ananassa HOM05D008545 ORTHO05D010341 2.6e-55 219.5 215 59.5
FAN03G1297 Fragaria x ananassa HOM05D008545 ORTHO05D010341 5.8e-55 218.4 215 58.6
FAN01G1302 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.3e-54 217.2 215 58.1
FAN10G3148 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.7e-54 216.9 215 58.6
Thecc.01G347700 Theobroma cacao HOM05D008545 ORTHO05D010341 6.2e-49 198.4 217 49.3
Duzib138G0500 Durio zibethinus HOM05D008545 ORTHO05D010341 5.8e-47 191.8 231 46.3
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 6.0e-44 181.8 220 46.4
Gohir.D07G144800 Gossypium hirsutum HOM05D008545 ORTHO05D010341 5.1e-43 178.7 221 46.6
Gorai.001G156800 Gossypium raimondii HOM05D008545 ORTHO05D010341 5.1e-43 178.7 221 46.6
Gohir.A07G139700 Gossypium hirsutum HOM05D008545 ORTHO05D010341 1.1e-42 177.6 221 46.2
GSVIVG01027047001 Vitis vinifera HOM05D008545 ORTHO05D010341 1.8e-40 170.2 232 43.5
Atru.chr5.619 Acer truncatum HOM05D008545 ORTHO05D010341 2.6e-39 166.4 233 43.3
FAN06G3211 Fragaria x ananassa HOM05D008545 ORTHO05D010341 2.6e-39 166.4 169 56.2
Eucgr.D02345 Eucalyptus grandis HOM05D008545 ORTHO05D010341 2.2e-33 146.7 236 39.8
Dinv43892 Davidia involucrata HOM05D008545 ORTHO05D010341 2.8e-33 146.4 201 43.8
Potri.014G094600 Populus trichocarpa HOM05D008545 ORTHO05D010341 1.8e-32 143.7 237 39.2
Potri.002G167500 Populus trichocarpa HOM05D008545 ORTHO05D010341 2.4e-32 143.3 220 40.0
MD01G1075500 Malus domestica HOM05D008545 ORTHO05D010341 5.9e-31 138.7 103 69.9
Manes.01G249300 Manihot esculenta HOM05D008545 ORTHO05D010341 7.7e-31 138.3 212 39.6
Lj9A592T71 Lonicera japonica HOM05D008545 ORTHO05D010341 2.3e-27 126.7 237 38.8
CSS0024380 Camellia sinensis var. sinensis HOM05D008545 ORTHO05D010341 3.7e-25 119.4 214 40.7
Lj7A504G55 Lonicera japonica HOM05D008545 ORTHO05D010341 9.1e-24 114.8 237 34.2
Sabra14G0069200 Salix brachista HOM05D008545 ORTHO05D010341 9.1e-24 114.8 139 43.9
PGR031G2054 Punica granatum HOM05D008545 ORTHO05D010341 1.2e-23 114.4 212 38.2
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 9.7e-18 94.7 221 33.0
Actinidia20194 Actinidia chinensis HOM05D008545 ORTHO05D010341 6.3e-17 92.0 201 35.3
DCAR_016077 Daucus carota HOM05D009167 ORTHO05D010341 2.4e-16 90.1 208 33.7
Nn1g01793 Nelumbo nucifera HOM05D008545 ORTHO05D010341 2.6e-15 86.7 170 34.7
Hma1.2p1_0384F.1_g141050 Hydrangea macrophylla HOM05D008545 ORTHO05D010341 3.5e-15 86.3 90 46.7
Peaxi162Scf00403g00718 Petunia axillaris HOM05D008545 ORTHO05D010341 5.9e-15 85.5 174 34.5
Nitab4.5_0002262g0100 Nicotiana tabacum HOM05D008545 ORTHO05D010341 2.2e-14 83.6 166 34.9
CANSAT56G3993 Cannabis sativa HOM05D008545 ORTHO05D010341 8.5e-14 81.6 108 40.7
CAN.G310.5 Capsicum annuum HOM05D008545 ORTHO05D010341 5.5e-13 79.0 143 31.5
PGSC0003DMG400033878 Solanum tuberosum HOM05D008545 ORTHO05D010341 1.5e-10 70.9 150 32.0
MSTRG.17319 Avicennia marina HOM05D008545 ORTHO05D010341 3.3e-10 69.7 229 27.9
Solyc05g050240.3 Solanum lycopersicum HOM05D008545 ORTHO05D010341 2.2e-09 67.0 149 28.9
COL.COLO4_06334 Corchorus olitorius HOM05D002314 ORTHO05D002538 1.2e-07 61.2 67 40.3
Sopen05g028690 Solanum pennellii HOM05D008545 ORTHO05D010341 1.6e-07 60.8 123 30.9
SGA_v2.0_scaffold5G02985 Striga asiatica HOM05D008545 ORTHO05D010341 2.0e-07 60.5 201 27.9
Nitab4.5_0003779g0040 Nicotiana tabacum HOM05D008545 ORTHO05D010341 7.7e-07 58.5 167 28.7
DCAR_016072 Daucus carota HOM05D008545 ORTHO05D010341 3.8e-06 56.2 198 29.3
Actinidia10102 Actinidia chinensis HOM05D008545 ORTHO05D010341 6.5e-06 55.5 79 36.7
Migut.B01833 Erythranthe guttata HOM05D008545 ORTHO05D010341 6.5e-06 55.5 87 36.8


User provided reference genes

Program Settings