Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G180300 Prunus persica HOM05D015530 ORTHO05D008136 1.1e-81 306.6 162 100.0
Prupe.2G180100 Prunus persica HOM05D015530 ORTHO05D008136 2.0e-38 162.9 99 86.9
FAN06G4503 Fragaria x ananassa HOM05D015530 ORTHO05D008136 3.4e-38 162.2 159 57.2
Prupe.2G180000 Prunus persica HOM05D015530 ORTHO05D008136 5.5e-36 154.8 146 63.7
Prupe.2G179900 Prunus persica HOM05D015530 ORTHO05D008136 4.7e-35 151.8 144 59.0
Prupe.2G180200 Prunus persica HOM05D015530 ORTHO05D008136 1.1e-33 147.1 140 63.6
FAN06G1921 Fragaria x ananassa HOM05D033618 ORTHO05D008136 1.7e-24 116.7 162 46.9
FvH4_3g38201 Fragaria vesca HOM05D015530 ORTHO05D008136 3.5e-22 109.0 116 55.2
FAN21G0420 Fragaria x ananassa HOM05D015530 ORTHO05D008136 4.5e-22 108.6 123 52.8
FvH4_7g15661 Fragaria vesca HOM05D033618 ORTHO05D008136 7.7e-22 107.8 137 47.4
FAN26G1553 Fragaria x ananassa HOM05D000189 ORTHO05D007542 6.8e-18 94.7 149 45.0
FAN19G2151 Fragaria x ananassa HOM05D026089 ORTHO05D008136 2.0e-17 93.2 164 43.3
FvH4_1g13031 Fragaria vesca HOM05D026089 ORTHO05D008136 2.8e-16 89.4 155 39.4
FAN23G0420 Fragaria x ananassa HOM05D026089 ORTHO05D008136 5.9e-14 81.6 144 43.1
FAN11G2821 Fragaria x ananassa HOM05D015530 ORTHO05D008136 1.1e-12 77.4 84 54.8
FAN06G4280 Fragaria x ananassa HOM05D033618 ORTHO05D008136 3.6e-11 72.4 110 42.7
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 6.1e-11 71.6 140 41.4
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.0e-10 69.3 98 43.9
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.0e-10 69.3 101 42.6
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 4.0e-10 68.9 105 40.0
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 5.2e-10 68.6 133 40.6
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 6.8e-10 68.2 120 39.2
FAN19G2108 Fragaria x ananassa HOM05D026089 ORTHO05D008136 8.8e-10 67.8 143 35.7
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.2e-09 67.4 127 37.8
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 3.4e-09 65.9 140 39.3
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.4e-09 65.9 101 39.6
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 4.9e-08 62.0 101 37.6
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.4e-07 60.5 111 38.7
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 1.8e-07 60.1 101 43.6
Phvul.010G103650 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.8e-07 60.1 142 32.4
Glyma.18G222000 Glycine max HOM05D028937 ORTHO05D008136 2.4e-07 59.7 157 30.6
Glyma.07G061700 Glycine max HOM05D008683 ORTHO05D010884 4.1e-07 58.9 124 34.7
Glyma.07G061900 Glycine max HOM05D008683 ORTHO05D010884 9.2e-07 57.8 124 34.7
Phvul.010G103450 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 9.2e-07 57.8 120 34.2
Phvul.010G103500 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 9.2e-07 57.8 120 34.2
Phvul.010G103600 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.2e-06 57.4 120 35.0
Dinv21660 Davidia involucrata HOM05D008848 ORTHO05D008136 2.7e-06 56.2 111 38.7
Medtr8g028350 Medicago truncatula HOM05D008683 ORTHO05D010884 2.7e-06 56.2 107 38.3
Psat4g213640 Pisum sativum HOM05D008683 ORTHO05D010884 3.5e-06 55.8 119 35.3
Glyma.07G065900 Glycine max HOM05D008683 ORTHO05D010884 4.5e-06 55.5 108 37.0
Glyma.07G066200 Glycine max HOM05D008683 ORTHO05D010884 7.7e-06 54.7 101 34.7


User provided reference genes

Program Settings