Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G180200 Prunus persica HOM05D015530 ORTHO05D008136 9.8e-101 370.2 191 100.0
Prupe.2G180000 Prunus persica HOM05D015530 ORTHO05D008136 6.2e-79 297.7 197 81.7
Prupe.2G179900 Prunus persica HOM05D015530 ORTHO05D008136 1.5e-37 160.2 145 61.4
Prupe.2G180300 Prunus persica HOM05D015530 ORTHO05D008136 2.7e-34 149.4 140 63.6
FAN06G4503 Fragaria x ananassa HOM05D015530 ORTHO05D008136 3.6e-34 149.1 160 58.1
FAN06G1921 Fragaria x ananassa HOM05D033618 ORTHO05D008136 5.2e-25 118.6 183 43.7
Prupe.2G180100 Prunus persica HOM05D015530 ORTHO05D008136 1.5e-24 117.1 133 53.4
FvH4_7g15661 Fragaria vesca HOM05D033618 ORTHO05D008136 3.1e-22 109.4 137 47.4
FvH4_1g13031 Fragaria vesca HOM05D026089 ORTHO05D008136 5.5e-19 98.6 193 41.5
FvH4_3g38201 Fragaria vesca HOM05D015530 ORTHO05D008136 7.2e-19 98.2 134 44.8
FAN21G0420 Fragaria x ananassa HOM05D015530 ORTHO05D008136 6.1e-18 95.1 111 49.5
FAN19G2151 Fragaria x ananassa HOM05D026089 ORTHO05D008136 6.7e-17 91.7 183 42.1
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 4.8e-15 85.5 157 38.9
FAN26G1553 Fragaria x ananassa HOM05D000189 ORTHO05D007542 6.3e-15 85.1 157 43.9
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 6.3e-15 85.1 141 39.7
FAN19G2108 Fragaria x ananassa HOM05D026089 ORTHO05D008136 2.4e-14 83.2 145 40.7
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.4e-14 83.2 158 38.6
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 3.5e-13 79.3 144 41.0
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 7.7e-13 78.2 142 38.7
FAN06G4280 Fragaria x ananassa HOM05D033618 ORTHO05D008136 1.3e-12 77.4 107 43.0
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.3e-12 77.4 109 43.1
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.3e-12 77.4 109 43.1
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.8e-12 75.9 139 39.6
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.5e-11 73.9 125 41.6
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 1.9e-11 73.6 115 45.2
Oeu020785.1 Olea europaea HOM05D009287 ORTHO05D008136 1.9e-11 73.6 141 35.5
Oeu034457.1 Olea europaea HOM05D009287 ORTHO05D008136 7.2e-11 71.6 157 31.2
FAN23G0420 Fragaria x ananassa HOM05D026089 ORTHO05D008136 9.4e-11 71.2 139 44.6
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 9.4e-11 71.2 107 40.2
Oeu020786.1 Olea europaea HOM05D009287 ORTHO05D008136 1.6e-10 70.5 133 35.3
FAN11G2821 Fragaria x ananassa HOM05D015530 ORTHO05D008136 2.7e-10 69.7 109 43.1
Glyma.18G222000 Glycine max HOM05D028937 ORTHO05D008136 2.7e-10 69.7 107 39.3
Dinv21660 Davidia involucrata HOM05D008848 ORTHO05D008136 3.6e-10 69.3 111 44.1
Oeu020788.1 Olea europaea HOM05D009287 ORTHO05D008136 4.7e-10 68.9 100 43.0
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.7e-10 68.9 98 42.9
GSVIVG01019271001 Vitis vinifera HOM05D008848 ORTHO05D008136 4.7e-10 68.9 162 35.2
Oeu020787.1 Olea europaea HOM05D009287 ORTHO05D008136 8.0e-10 68.2 131 33.6
Glyma.09G267900 Glycine max HOM05D028937 ORTHO05D008136 2.3e-09 66.6 103 41.7
Oeu020784.1 Olea europaea HOM05D009287 ORTHO05D008136 2.3e-09 66.6 159 32.1
Phvul.008G075150 Phaseolus vulgaris HOM05D028937 ORTHO05D008136 3.4e-08 62.8 122 36.1
Sabra06G0022800 Salix brachista HOM05D008848 ORTHO05D008136 4.4e-08 62.4 120 35.8
Eucgr.D00561 Eucalyptus grandis HOM05D008848 ORTHO05D008136 7.5e-08 61.6 101 43.6
Prupe.2G143100 Prunus persica HOM05D012558 ORTHO05D012876 9.8e-08 61.2 100 39.0
Potri.006G034450 Populus trichocarpa HOM05D008848 ORTHO05D008136 1.7e-07 60.5 120 33.3
Potri.016G032783 Populus trichocarpa HOM05D008848 ORTHO05D008136 2.2e-07 60.1 114 38.6
Nitab4.5_0001590g0010 Nicotiana tabacum HOM05D008848 ORTHO05D008136 3.7e-07 59.3 117 36.8
Oeu026046.1 Olea europaea HOM05D009287 ORTHO05D008136 8.3e-07 58.2 149 33.6
Rhsim03G0061900 Rhododendron simsii HOM05D009287 ORTHO05D008136 8.3e-07 58.2 103 35.0
Psat4g213640 Pisum sativum HOM05D008683 ORTHO05D010884 1.4e-06 57.4 117 33.3
GSVIVG01001261001 Vitis vinifera HOM05D008848 ORTHO05D008136 1.4e-06 57.4 108 42.6
QL07p012914 Quercus lobata HOM05D008848 ORTHO05D008136 3.1e-06 56.2 126 34.9
Rhsim03G0062000 Rhododendron simsii HOM05D009287 ORTHO05D008136 3.1e-06 56.2 101 34.7
Glyma.07G061900 Glycine max HOM05D008683 ORTHO05D010884 5.4e-06 55.5 123 32.5
Hma1.2p1_0316F.1_g122780 Hydrangea macrophylla HOM05D010926 ORTHO05D008136 5.4e-06 55.5 106 39.6
Phvul.010G103650 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 7.0e-06 55.1 122 34.4
Glyma.07G061700 Glycine max HOM05D008683 ORTHO05D010884 9.1e-06 54.7 123 32.5
Peaxi162Scf00155g00133 Petunia axillaris HOM05D008848 ORTHO05D008136 9.1e-06 54.7 117 35.0


User provided reference genes

Program Settings