Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G180000 Prunus persica HOM05D015530 ORTHO05D008136 7.2e-99 364.0 196 100.0
Prupe.2G180200 Prunus persica HOM05D015530 ORTHO05D008136 5.8e-80 301.2 197 81.7
Prupe.2G179900 Prunus persica HOM05D015530 ORTHO05D008136 5.4e-38 161.8 151 59.6
Prupe.2G180300 Prunus persica HOM05D015530 ORTHO05D008136 2.1e-37 159.8 146 63.7
FAN06G4503 Fragaria x ananassa HOM05D015530 ORTHO05D008136 2.8e-34 149.4 166 54.2
Prupe.2G180100 Prunus persica HOM05D015530 ORTHO05D008136 5.3e-25 118.6 125 56.0
FAN06G1921 Fragaria x ananassa HOM05D033618 ORTHO05D008136 2.6e-24 116.3 181 43.1
FvH4_7g15661 Fragaria vesca HOM05D033618 ORTHO05D008136 2.1e-21 106.7 139 45.3
FvH4_3g38201 Fragaria vesca HOM05D015530 ORTHO05D008136 7.9e-21 104.8 139 46.8
FAN21G0420 Fragaria x ananassa HOM05D015530 ORTHO05D008136 1.8e-20 103.6 139 46.8
FvH4_1g13031 Fragaria vesca HOM05D026089 ORTHO05D008136 1.1e-19 100.9 197 38.6
FAN19G2151 Fragaria x ananassa HOM05D026089 ORTHO05D008136 7.4e-19 98.2 204 42.2
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 1.7e-15 87.0 156 41.0
FAN26G1553 Fragaria x ananassa HOM05D000189 ORTHO05D007542 2.2e-15 86.7 163 42.3
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 2.9e-15 86.3 149 40.3
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 6.5e-15 85.1 147 39.5
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.2e-14 82.8 151 40.4
FAN19G2108 Fragaria x ananassa HOM05D026089 ORTHO05D008136 1.2e-13 80.9 151 37.7
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.2e-13 80.9 151 37.7
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 6.1e-13 78.6 113 41.6
Glyma.18G222000 Glycine max HOM05D028937 ORTHO05D008136 1.8e-12 77.0 191 31.9
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.8e-12 77.0 113 41.6
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.3e-12 76.6 103 45.6
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.9e-12 75.9 113 40.7
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 2.0e-11 73.6 97 48.5
FAN23G0420 Fragaria x ananassa HOM05D026089 ORTHO05D008136 3.3e-11 72.8 145 42.1
Oeu020788.1 Olea europaea HOM05D009287 ORTHO05D008136 3.3e-11 72.8 131 38.9
FAN06G4280 Fragaria x ananassa HOM05D033618 ORTHO05D008136 4.3e-11 72.4 109 39.4
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 5.7e-11 72.0 130 34.6
FAN11G2821 Fragaria x ananassa HOM05D015530 ORTHO05D008136 2.8e-10 69.7 109 45.0
Psat4g213640 Pisum sativum HOM05D008683 ORTHO05D010884 2.8e-10 69.7 116 37.1
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.7e-10 69.3 108 38.9
Glyma.09G267900 Glycine max HOM05D028937 ORTHO05D008136 1.8e-09 67.0 96 41.7
Oeu020786.1 Olea europaea HOM05D009287 ORTHO05D008136 1.8e-09 67.0 127 37.0
Sabra06G0022800 Salix brachista HOM05D008848 ORTHO05D008136 2.4e-09 66.6 108 38.9
Oeu020784.1 Olea europaea HOM05D009287 ORTHO05D008136 3.1e-09 66.2 123 37.4
Oeu020785.1 Olea europaea HOM05D009287 ORTHO05D008136 4.1e-09 65.9 133 36.1
Dinv21660 Davidia involucrata HOM05D008848 ORTHO05D008136 5.3e-09 65.5 107 41.1
Phvul.008G075150 Phaseolus vulgaris HOM05D028937 ORTHO05D008136 5.3e-09 65.5 146 34.2
GSVIVG01019271001 Vitis vinifera HOM05D008848 ORTHO05D008136 5.3e-09 65.5 104 47.1
Oeu034457.1 Olea europaea HOM05D009287 ORTHO05D008136 9.1e-09 64.7 125 34.4
Oeu020787.1 Olea europaea HOM05D009287 ORTHO05D008136 1.2e-08 64.3 125 36.0
Phvul.010G103650 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 3.4e-08 62.8 127 32.3
Glyma.07G066200 Glycine max HOM05D008683 ORTHO05D010884 4.5e-08 62.4 106 34.0
Nitab4.5_0001381g0030 Nicotiana tabacum HOM05D008848 ORTHO05D008136 4.5e-08 62.4 145 33.1
Potri.006G034450 Populus trichocarpa HOM05D008848 ORTHO05D008136 4.5e-08 62.4 108 35.2
Medtr8g028350 Medicago truncatula HOM05D008683 ORTHO05D010884 5.9e-08 62.0 94 37.2
Nitab4.5_0001590g0010 Nicotiana tabacum HOM05D008848 ORTHO05D008136 7.7e-08 61.6 100 42.0
Phvul.010G103450 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.0e-07 61.2 127 31.5
Phvul.010G103500 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.0e-07 61.2 127 31.5
Phvul.010G103600 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.0e-07 61.2 127 31.5
Prupe.2G143100 Prunus persica HOM05D012558 ORTHO05D012876 1.3e-07 60.8 102 40.2
QL07p012914 Quercus lobata HOM05D008848 ORTHO05D008136 1.7e-07 60.5 107 38.3
Rhsim03G0062000 Rhododendron simsii HOM05D009287 ORTHO05D008136 1.7e-07 60.5 103 35.9
Glyma.07G061700 Glycine max HOM05D008683 ORTHO05D010884 2.9e-07 59.7 101 35.6
Glyma.07G061900 Glycine max HOM05D008683 ORTHO05D010884 2.9e-07 59.7 101 35.6
Eucgr.D00561 Eucalyptus grandis HOM05D008848 ORTHO05D008136 5.0e-07 58.9 101 42.6
GSVIVG01001261001 Vitis vinifera HOM05D008848 ORTHO05D008136 5.0e-07 58.9 104 46.2
Rhsim03G0061900 Rhododendron simsii HOM05D009287 ORTHO05D008136 6.5e-07 58.5 102 36.3
QL07p012771 Quercus lobata HOM05D008848 ORTHO05D008136 1.9e-06 57.0 107 37.4
Medtr7g075160 Medicago truncatula HOM05D028937 ORTHO05D008136 3.2e-06 56.2 110 32.7
Potri.016G032783 Populus trichocarpa HOM05D008848 ORTHO05D008136 4.2e-06 55.8 85 40.0
Glyma.07G065900 Glycine max HOM05D008683 ORTHO05D010884 5.5e-06 55.5 114 34.2
QL04p038305 Quercus lobata HOM05D010926 ORTHO05D011735 5.5e-06 55.5 99 34.3
Medtr8g028355 Medicago truncatula HOM05D008683 ORTHO05D010884 7.2e-06 55.1 131 28.2
Peaxi162Scf00155g00133 Petunia axillaris HOM05D008848 ORTHO05D008136 7.2e-06 55.1 101 38.6


User provided reference genes

Program Settings