Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G179900 Prunus persica HOM05D015530 ORTHO05D008136 3.0e-73 278.5 145 100.0
Prupe.2G180000 Prunus persica HOM05D015530 ORTHO05D008136 9.9e-37 157.1 151 59.6
Prupe.2G180200 Prunus persica HOM05D015530 ORTHO05D008136 1.3e-36 156.8 145 61.4
FAN06G4503 Fragaria x ananassa HOM05D015530 ORTHO05D008136 2.4e-35 152.5 147 57.1
Prupe.2G180300 Prunus persica HOM05D015530 ORTHO05D008136 3.2e-35 152.1 144 59.0
FvH4_3g38201 Fragaria vesca HOM05D015530 ORTHO05D008136 2.4e-22 109.4 126 50.8
FAN21G0420 Fragaria x ananassa HOM05D015530 ORTHO05D008136 4.0e-22 108.6 146 45.9
Prupe.2G180100 Prunus persica HOM05D015530 ORTHO05D008136 1.4e-19 100.1 110 48.2
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 2.1e-18 96.3 147 42.9
FvH4_1g13031 Fragaria vesca HOM05D026089 ORTHO05D008136 2.7e-18 95.9 148 42.6
FvH4_7g15661 Fragaria vesca HOM05D033618 ORTHO05D008136 6.0e-18 94.7 138 42.8
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 3.0e-17 92.4 142 38.0
FAN06G1921 Fragaria x ananassa HOM05D033618 ORTHO05D008136 3.9e-17 92.0 145 43.4
FAN11G2821 Fragaria x ananassa HOM05D015530 ORTHO05D008136 1.1e-16 90.5 105 50.5
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.7e-15 85.5 101 47.5
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 4.8e-15 85.1 148 40.5
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 4.8e-15 85.1 101 48.5
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 4.8e-15 85.1 123 43.1
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.8e-14 83.2 101 45.5
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.4e-14 82.8 101 46.5
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 4.1e-14 82.0 141 40.4
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 4.1e-14 82.0 100 45.0
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 5.3e-14 81.6 101 45.5
FAN19G2108 Fragaria x ananassa HOM05D026089 ORTHO05D008136 5.9e-13 78.2 145 37.2
FAN26G1553 Fragaria x ananassa HOM05D000189 ORTHO05D007542 1.3e-12 77.0 151 40.4
FAN19G2151 Fragaria x ananassa HOM05D026089 ORTHO05D008136 2.2e-12 76.3 154 39.6
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.9e-12 75.9 95 45.3
Glyma.07G061700 Glycine max HOM05D008683 ORTHO05D010884 1.1e-11 73.9 123 39.0
Glyma.07G061900 Glycine max HOM05D008683 ORTHO05D010884 1.1e-11 73.9 123 39.0
Dinv21660 Davidia involucrata HOM05D008848 ORTHO05D008136 1.4e-11 73.6 116 39.7
Glyma.07G065900 Glycine max HOM05D008683 ORTHO05D010884 9.4e-11 70.9 113 39.8
Phvul.010G103650 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.6e-10 70.1 125 36.8
FAN06G4280 Fragaria x ananassa HOM05D033618 ORTHO05D008136 2.1e-10 69.7 104 41.3
Potri.006G034450 Populus trichocarpa HOM05D008848 ORTHO05D008136 2.1e-10 69.7 111 38.7
Phvul.010G103600 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 2.7e-10 69.3 125 36.0
QL07p012914 Quercus lobata HOM05D008848 ORTHO05D008136 6.1e-10 68.2 136 37.5
Glyma.07G066200 Glycine max HOM05D008683 ORTHO05D010884 7.9e-10 67.8 120 35.8
Phvul.010G103450 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 7.9e-10 67.8 128 38.3
Phvul.010G103500 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 7.9e-10 67.8 128 38.3
Potri.016G032783 Populus trichocarpa HOM05D008848 ORTHO05D008136 1.0e-09 67.4 98 40.8
Rhsim03G0062000 Rhododendron simsii HOM05D009287 ORTHO05D008136 1.4e-09 67.0 108 39.8
Glyma.18G222000 Glycine max HOM05D028937 ORTHO05D008136 1.8e-09 66.6 142 33.8
Psat4g213640 Pisum sativum HOM05D008683 ORTHO05D010884 1.8e-09 66.6 124 36.3
Sabra06G0022800 Salix brachista HOM05D008848 ORTHO05D008136 2.3e-09 66.2 111 36.9
QL07p012771 Quercus lobata HOM05D008848 ORTHO05D008136 3.9e-09 65.5 138 35.5
Rhsim03G0061900 Rhododendron simsii HOM05D009287 ORTHO05D008136 5.1e-09 65.1 107 40.2
FAN23G0420 Fragaria x ananassa HOM05D026089 ORTHO05D008136 6.7e-09 64.7 139 41.0
Nitab4.5_0001381g0030 Nicotiana tabacum HOM05D008848 ORTHO05D008136 1.5e-08 63.5 130 36.2
Potri.006G034375 Populus trichocarpa HOM05D009287 ORTHO05D008136 1.5e-08 63.5 134 36.6
Glyma.09G267900 Glycine max HOM05D028937 ORTHO05D008136 2.0e-08 63.2 141 31.9
VMungo1114G0001 Vigna mungo HOM05D008683 ORTHO05D010884 2.0e-08 63.2 125 34.4
FAN06G2646 Fragaria x ananassa HOM05D006804 ORTHO05D012876 2.5e-08 62.8 137 35.8
FAN06G2981 Fragaria x ananassa HOM05D006804 ORTHO05D012876 2.5e-08 62.8 137 35.8
Glyma.07G062000 Glycine max HOM05D008683 ORTHO05D010884 2.5e-08 62.8 131 35.1
Medtr8g028365 Medicago truncatula HOM05D008683 ORTHO05D010884 4.3e-08 62.0 151 30.5
Prupe.2G143000 Prunus persica HOM05D012558 ORTHO05D012876 4.3e-08 62.0 130 35.4
Prupe.2G143100 Prunus persica HOM05D012558 ORTHO05D012876 4.3e-08 62.0 102 42.2
Prupe.2G142700 Prunus persica HOM05D012558 ORTHO05D012876 7.4e-08 61.2 139 34.5
Medtr8g028360 Medicago truncatula HOM05D008683 ORTHO05D010884 9.7e-08 60.8 113 34.5
Actinidia31512 Actinidia chinensis HOM05D008848 ORTHO05D008136 1.3e-07 60.5 103 37.9
Medtr8g028350 Medicago truncatula HOM05D008683 ORTHO05D010884 1.3e-07 60.5 125 33.6
Nitab4.5_0001590g0010 Nicotiana tabacum HOM05D008848 ORTHO05D008136 1.7e-07 60.1 103 39.8
FAN03G2804 Fragaria x ananassa HOM05D012558 ORTHO05D012876 2.8e-07 59.3 137 35.0
Medtr8g028300 Medicago truncatula HOM05D008683 ORTHO05D010884 4.8e-07 58.5 120 30.0
Peaxi162Scf00155g00133 Petunia axillaris HOM05D008848 ORTHO05D008136 8.2e-07 57.8 140 35.7
Prupe.2G076600 Prunus persica HOM05D012558 ORTHO05D012876 8.2e-07 57.8 111 39.6
FAN03G1599 Fragaria x ananassa HOM05D012558 ORTHO05D012876 1.1e-06 57.4 112 37.5
Oeu020786.1 Olea europaea HOM05D009287 ORTHO05D008136 1.1e-06 57.4 120 32.5
Psat1g148400 Pisum sativum HOM05D008683 ORTHO05D010884 1.1e-06 57.4 115 32.2
TPR.G18157 Trifolium pratense HOM05D008683 ORTHO05D010884 1.4e-06 57.0 89 40.4
Medtr7g086850 Medicago truncatula HOM05D008683 ORTHO05D010884 1.8e-06 56.6 111 31.5
Solyc08g078360.1 Solanum lycopersicum HOM05D008848 ORTHO05D008136 1.8e-06 56.6 140 33.6
FAN06G0253 Fragaria x ananassa HOM05D012558 ORTHO05D012876 2.4e-06 56.2 98 37.8
Phvul.008G075150 Phaseolus vulgaris HOM05D028937 ORTHO05D008136 2.4e-06 56.2 134 32.8
FAN01G2192 Fragaria x ananassa HOM05D012558 ORTHO05D012876 3.1e-06 55.8 112 37.5
Hma1.2p1_0316F.1_g122780 Hydrangea macrophylla HOM05D010926 ORTHO05D008136 3.1e-06 55.8 86 41.9
Medtr7g075160 Medicago truncatula HOM05D028937 ORTHO05D008136 4.1e-06 55.5 135 33.3
Oeu020788.1 Olea europaea HOM05D009287 ORTHO05D008136 4.1e-06 55.5 109 36.7
FAN06G4300 Fragaria x ananassa HOM05D012558 ORTHO05D012876 5.3e-06 55.1 112 37.5
Medtr8g028275 Medicago truncatula HOM05D008683 ORTHO05D010884 5.3e-06 55.1 133 30.8
Actinidia14403 Actinidia chinensis HOM05D009466 ORTHO05D008136 9.1e-06 54.3 112 38.4
FvH4_7g11471 Fragaria vesca HOM05D012558 ORTHO05D012876 9.1e-06 54.3 135 34.1
FAN06G1149 Fragaria x ananassa HOM05D027471 ORTHO05D012876 9.1e-06 54.3 128 34.4


User provided reference genes

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