Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G163000 Prunus persica HOM05D017224 ORTHO05D011417 1.5e-152 542.7 265 100.0
Prupe.2G163400 Prunus persica HOM05D017224 ORTHO05D011417 2.1e-48 196.8 261 46.4
Prupe.2G163100 Prunus persica HOM05D017224 ORTHO05D011417 2.1e-32 143.7 267 38.6
Prupe.2G163300 Prunus persica HOM05D017224 ORTHO05D011417 6.2e-29 132.1 264 38.3
Prupe.2G163600 Prunus persica HOM05D017224 ORTHO05D011417 2.3e-23 113.6 264 34.8
Prupe.2G163200 Prunus persica HOM05D017224 ORTHO05D011417 4.5e-19 99.4 270 33.3
Cfa003957 Carpinus fangiana HOM05D029117 ORTHO05D011417 1.7e-18 97.4 263 30.8
Prupe.2G163700 Prunus persica HOM05D017224 ORTHO05D011417 8.5e-18 95.1 271 33.9
Prupe.2G162800 Prunus persica HOM05D017224 ORTHO05D011417 1.9e-17 94.0 120 46.7
Haze_15477 Corylus avellana HOM05D029117 ORTHO05D011417 1.8e-12 77.4 296 27.4
Rhsim11G0146100 Rhododendron simsii HOM05D013756 ORTHO05D011417 5.3e-12 75.9 265 26.8
RcHm_v2.0_Chr1g0353761 Rosa chinensis HOM05D002404 ORTHO05D011417 2.6e-11 73.6 167 32.3
Dinv32451 Davidia involucrata HOM05D002404 ORTHO05D011417 4.5e-11 72.8 104 39.4
Rhsim01G0113400 Rhododendron simsii HOM05D002404 ORTHO05D011417 4.5e-11 72.8 265 27.5
Dinv32452 Davidia involucrata HOM05D002404 ORTHO05D011417 1.3e-10 71.2 139 34.5
Rhsim01G0113500 Rhododendron simsii HOM05D002404 ORTHO05D011417 1.3e-10 71.2 268 26.9
RcHm_v2.0_Chr1g0353881 Rosa chinensis HOM05D027656 ORTHO05D029666 1.3e-10 71.2 113 41.6
Haze_15465 Corylus avellana HOM05D001826 ORTHO05D004184 2.5e-09 67.0 257 27.2
RcHm_v2.0_Chr1g0353981 Rosa chinensis HOM05D027656 ORTHO05D029666 5.5e-09 65.9 254 26.4
RcHm_v2.0_Chr1g0353871 Rosa chinensis HOM05D027656 ORTHO05D029666 1.2e-08 64.7 157 31.8
Rhsim11G0146200 Rhododendron simsii HOM05D000029 ORTHO05D011417 1.4e-07 61.2 107 38.3
CSS0032388 Camellia sinensis var. sinensis HOM05D013756 ORTHO05D011417 3.0e-07 60.1 263 29.7
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 3.9e-07 59.7 107 37.4
FvH4_7g13780 Fragaria vesca HOM05D027656 ORTHO05D029666 1.1e-06 58.2 236 26.3
CsaV3_6G000390 Cucumis sativus L. HOM05D008929 ORTHO05D012665 2.6e-06 57.0 164 29.9
HPP92_018042 Vanilla planifolia HOM05D002404 ORTHO05D003647 2.6e-06 57.0 269 24.9
Cpa.g.sc112.81 Carica papaya HOM05D002404 ORTHO05D003647 3.3e-06 56.6 270 25.9
CANSAT78G2483 Cannabis sativa HOM05D002404 ORTHO05D003647 4.4e-06 56.2 271 25.5
Thecc.09G307900 Theobroma cacao HOM05D002404 ORTHO05D003647 4.4e-06 56.2 270 25.9
CDE09G0989 Ceratophyllum demersum HOM05D002404 ORTHO05D003647 5.7e-06 55.8 271 25.5
unitig_747.g22020 Utricularia gibba HOM05D002404 ORTHO05D003647 5.7e-06 55.8 269 25.7
MSTRG.21172 Avicennia marina HOM05D002404 ORTHO05D003647 7.4e-06 55.5 269 25.3
CANSAT54G2750 Cannabis sativa HOM05D002404 ORTHO05D003647 7.4e-06 55.5 271 25.5
CiPaw.13G083600 Carya illinoinensis HOM05D002404 ORTHO05D003647 7.4e-06 55.5 268 25.0
Oeu049279.1 Olea europaea HOM05D002404 ORTHO05D003647 7.4e-06 55.5 269 25.7
CiPaw.14G062600 Carya illinoinensis HOM05D002404 ORTHO05D003647 9.7e-06 55.1 271 25.1
Ca_14888_v3 Cicer arietinum L. HOM05D002404 ORTHO05D003647 9.7e-06 55.1 268 25.0
Ciclev10029070m.g Citrus clementina HOM05D002404 ORTHO05D003647 9.7e-06 55.1 267 25.5
Haze_24235 Corylus avellana HOM05D002404 ORTHO05D003647 9.7e-06 55.1 269 24.9
ECA248G2035 Erigeron canadensis HOM05D002404 ORTHO05D003647 9.7e-06 55.1 269 24.2
Eucgr.J01951 Eucalyptus grandis HOM05D002404 ORTHO05D003647 9.7e-06 55.1 268 24.6
Mapoly0075s0032 Marchantia polymorpha HOM05D002404 ORTHO05D003647 9.7e-06 55.1 276 25.7
SalBow3G1232 Salvia bowleyana HOM05D002404 ORTHO05D003647 9.7e-06 55.1 269 25.3
SalBow3G1958 Salvia bowleyana HOM05D002404 ORTHO05D003647 9.7e-06 55.1 269 25.3
VMungo0540G1433 Vigna mungo HOM05D002404 ORTHO05D003647 9.7e-06 55.1 269 24.5


User provided reference genes

Program Settings