Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G156000 Prunus persica HOM05D000614 ORTHO05D334279 8.6e-41 169.9 84 100.0
MD16G1075300 Malus domestica HOM05D000614 ORTHO05D000463 2.4e-14 82.0 47 87.2
Prupe.1G271900 Prunus persica HOM05D000614 ORTHO05D000463 5.2e-14 80.9 40 97.5
CANSAT64G2919 Cannabis sativa HOM05D000614 ORTHO05D000463 2.1e-10 68.9 51 70.6
MD13G1074100 Malus domestica HOM05D000614 ORTHO05D000463 4.6e-10 67.8 47 76.6
PGR119G1726 Punica granatum HOM05D000614 ORTHO05D000463 3.0e-09 65.1 44 72.7
Hma1.2p1_0265F.1_g106650 Hydrangea macrophylla HOM05D000614 ORTHO05D000463 3.9e-09 64.7 46 71.7
Migut.L01313 Erythranthe guttata HOM05D000614 ORTHO05D000463 6.6e-09 63.9 66 54.5
FvH4_4g31561 Fragaria vesca HOM05D000614 ORTHO05D000463 6.6e-09 63.9 48 72.9
FAN12G2430 Fragaria x ananassa HOM05D000614 ORTHO05D000463 6.6e-09 63.9 48 72.9
Peaxi162Scf00541g00068 Petunia axillaris HOM05D000614 ORTHO05D000463 8.7e-09 63.5 49 65.3
FAN07G1028 Fragaria x ananassa HOM05D000614 ORTHO05D000463 1.5e-08 62.8 51 68.6
Nitab4.5_0004436g0040 Nicotiana tabacum HOM05D000614 ORTHO05D000463 1.5e-08 62.8 49 65.3
FAN22G1623 Fragaria x ananassa HOM05D000614 ORTHO05D000463 1.9e-08 62.4 48 72.9
Lj6P791T12 Lonicera japonica HOM05D000614 ORTHO05D000463 2.5e-08 62.0 46 69.6
Nitab4.5_0002151g0020 Nicotiana tabacum HOM05D000614 ORTHO05D000463 4.3e-08 61.2 49 65.3
Actinidia19049 Actinidia chinensis HOM05D000614 ORTHO05D000463 5.6e-08 60.8 46 63.0
CSS0010118 Camellia sinensis var. sinensis HOM05D000614 ORTHO05D000463 9.6e-08 60.1 61 49.2
CSS0046340 Camellia sinensis var. sinensis HOM05D000614 ORTHO05D000463 9.6e-08 60.1 61 49.2
FAN17G0787 Fragaria x ananassa HOM05D000614 ORTHO05D000463 1.2e-07 59.7 48 70.8
RcHm_v2.0_Chr4g0440091 Rosa chinensis HOM05D000614 ORTHO05D000463 1.2e-07 59.7 55 65.5
Atru.chr11.1826 Acer truncatum HOM05D000614 ORTHO05D000463 1.6e-07 59.3 51 66.7
Nitab4.5_0000785g0030 Nicotiana tabacum HOM05D000614 ORTHO05D000463 1.6e-07 59.3 46 60.9
Cc11_g13250 Coffea canephora HOM05D000614 ORTHO05D000463 2.1e-07 58.9 44 65.9
Dinv34171 Davidia involucrata HOM05D000614 ORTHO05D000463 3.6e-07 58.2 55 54.5
Sc11g0001790 Simmondsia chinensis HOM05D000614 ORTHO05D000463 3.6e-07 58.2 56 50.0
Cpa.g.sc183.34 Carica papaya HOM05D000614 ORTHO05D000463 6.2e-07 57.4 40 70.0
Nitab4.5_0001488g0050 Nicotiana tabacum HOM05D000614 ORTHO05D000463 6.2e-07 57.4 49 59.2
Prupe.5G189400 Prunus persica HOM05D000614 ORTHO05D000463 6.2e-07 57.4 45 62.2
Actinidia19865 Actinidia chinensis HOM05D000614 ORTHO05D000463 8.1e-07 57.0 46 67.4
Nitab4.5_0001488g0060 Nicotiana tabacum HOM05D000614 ORTHO05D000463 8.1e-07 57.0 55 56.4
Cfa018967 Carpinus fangiana HOM05D000614 ORTHO05D000463 1.1e-06 56.6 44 61.4
Haze_07349 Corylus avellana HOM05D000614 ORTHO05D000463 1.1e-06 56.6 44 61.4
Lj1g0004827 Lotus japonicus HOM05D000614 ORTHO05D000463 1.1e-06 56.6 45 62.2
Nitab4.5_0000343g0010 Nicotiana tabacum HOM05D000614 ORTHO05D000463 1.1e-06 56.6 49 59.2
Nitab4.5_0000343g0030 Nicotiana tabacum HOM05D000614 ORTHO05D000463 1.1e-06 56.6 49 59.2
MSTRG.7813 Avicennia marina HOM05D000614 ORTHO05D000463 1.4e-06 56.2 76 44.7
ECA234G1648 Erigeron canadensis HOM05D000614 ORTHO05D000463 1.4e-06 56.2 43 60.5
Eucgr.B03422 Eucalyptus grandis HOM05D000614 ORTHO05D000463 1.4e-06 56.2 67 52.2
HanXRQChr05g0152301 Helianthus annuus HOM05D000614 ORTHO05D000463 1.4e-06 56.2 43 62.8
QL10p016232 Quercus lobata HOM05D000614 ORTHO05D000463 1.4e-06 56.2 44 61.4
Rhsim12G0061500 Rhododendron simsii HOM05D000614 ORTHO05D000463 1.4e-06 56.2 48 62.5
CAN.G1305.10 Capsicum annuum HOM05D000614 ORTHO05D000463 1.8e-06 55.8 43 60.5
Eucgr.B00462 Eucalyptus grandis HOM05D000614 ORTHO05D000463 1.8e-06 55.8 46 58.7
CsaV3_5G032540 Cucumis sativus L. HOM05D000614 ORTHO05D000463 2.4e-06 55.5 72 48.6
Oeu028299.1 Olea europaea HOM05D000614 ORTHO05D000463 2.4e-06 55.5 50 60.0
Oeu045410.1 Olea europaea HOM05D000614 ORTHO05D000463 2.4e-06 55.5 50 58.0
MD14G1197300 Malus domestica HOM05D000614 ORTHO05D000463 3.1e-06 55.1 45 60.0
Manes.01G187600 Manihot esculenta HOM05D000614 ORTHO05D000463 3.1e-06 55.1 52 53.8
Nitab4.5_0010552g0020 Nicotiana tabacum HOM05D000614 ORTHO05D000463 3.1e-06 55.1 46 58.7
MSTRG.688 Avicennia marina HOM05D000614 ORTHO05D000463 4.0e-06 54.7 49 63.3
MELO3C027345.2 Cucumis melo HOM05D000614 ORTHO05D000463 4.0e-06 54.7 72 48.6
Sopen03g032080 Solanum pennellii HOM05D000614 ORTHO05D000463 4.0e-06 54.7 43 58.1
THA.LOC104805150 Tarenaya hassleriana HOM05D000614 ORTHO05D000463 4.0e-06 54.7 49 59.2
Lalb_Chr08g0235811 Lupinus albus HOM05D000614 ORTHO05D000463 5.2e-06 54.3 42 61.9
Peaxi162Scf00009g00025 Petunia axillaris HOM05D000614 ORTHO05D000463 5.2e-06 54.3 51 54.9
Peaxi162Scf00101g00212 Petunia axillaris HOM05D000614 ORTHO05D000463 5.2e-06 54.3 70 51.4
GSVIVG01020023001 Vitis vinifera HOM05D000614 ORTHO05D000463 5.2e-06 54.3 66 51.5
BcaC06g34031 Brassica carinata HOM05D000614 ORTHO05D000463 6.9e-06 53.9 43 62.8
C07p33550 Brassica napus HOM05D000614 ORTHO05D000463 6.9e-06 53.9 43 62.8
BolC7t43865H Brassica oleracea HOM05D000614 ORTHO05D000463 6.9e-06 53.9 43 62.8
Solyc03g113010.3 Solanum lycopersicum HOM05D000614 ORTHO05D000463 6.9e-06 53.9 43 58.1
A06p43400 Brassica napus HOM05D000614 ORTHO05D000463 9.0e-06 53.5 43 62.8
BraA06t27226Z Brassica rapa HOM05D000614 ORTHO05D000463 9.0e-06 53.5 43 62.8
Ciclev10031487m.g Citrus clementina HOM05D000614 ORTHO05D000463 9.0e-06 53.5 84 45.2
Dinv38686 Davidia involucrata HOM05D000614 ORTHO05D000463 9.0e-06 53.5 73 46.6


User provided reference genes

Program Settings