Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 4.1e-201 704.5 357 100.0
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 1.8e-180 636.0 358 87.2
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.8e-180 636.0 358 87.2
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 6.8e-180 634.0 358 90.8
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 9.8e-179 630.2 357 86.8
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.7e-178 629.4 358 86.9
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 7.3e-174 614.0 357 84.3
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 2.6e-171 605.5 357 85.4
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 6.0e-168 594.3 357 83.5
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 6.0e-168 594.3 359 83.0
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 3.9e-167 591.7 357 81.0
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 9.6e-166 587.0 359 81.6
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 6.2e-165 584.3 357 81.0
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 1.2e-163 580.1 357 79.8
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 3.4e-163 578.6 357 81.2
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 5.8e-163 577.8 359 80.5
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.3e-162 576.6 359 80.2
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 2.9e-162 575.5 358 81.3
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 6.4e-162 574.3 357 80.1
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 1.4e-161 573.2 357 80.1
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 2.4e-161 572.4 360 78.6
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 3.2e-161 572.0 357 79.8
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 3.9e-159 565.1 359 77.7
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 5.1e-159 564.7 358 77.7
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 2.5e-158 562.4 358 77.1
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 5.6e-158 561.2 359 78.8
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 7.3e-158 560.8 360 77.2
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 3.6e-157 558.5 362 79.0
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 8.1e-157 557.4 357 77.6
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 1.1e-156 557.0 359 79.1
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 1.8e-156 556.2 346 82.4
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 5.3e-156 554.7 360 76.7
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 1.2e-155 553.5 358 75.7
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 1.2e-155 553.5 377 74.0
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 3.4e-155 552.0 358 76.0
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 9.9e-155 550.4 410 69.8
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 1.3e-154 550.1 351 76.6
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 1.3e-154 550.1 358 75.1
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 1.3e-154 550.1 358 76.3
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 1.7e-154 549.7 359 76.0
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 8.4e-154 547.4 351 76.4
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 1.6e-152 543.1 360 75.8
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 3.5e-152 542.0 359 74.9
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 6.0e-152 541.2 358 73.5
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 1.7e-151 539.7 357 75.4
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 3.0e-151 538.9 356 73.3
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 1.9e-150 536.2 359 73.3
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 4.3e-150 535.0 359 74.1
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 7.4e-150 534.3 378 72.0
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 1.3e-149 533.5 357 72.8
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 1.3e-149 533.5 357 72.8
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 1.3e-149 533.5 323 80.2
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 3.6e-149 531.9 356 73.0
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 4.8e-149 531.6 357 72.8
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 1.1e-148 530.4 404 69.6
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 1.8e-148 529.6 357 72.5
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 2.0e-147 526.2 357 72.0
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 9.9e-147 523.9 369 72.9
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 1.4e-145 520.0 357 70.6
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 8.7e-143 510.8 359 72.1
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 8.7e-143 510.8 352 70.2
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 8.1e-141 504.2 327 75.8
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 6.9e-140 501.1 334 72.2
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 1.7e-138 496.5 362 67.4
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 1.7e-138 496.5 368 69.3
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 5.5e-137 491.5 355 69.9
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 2.1e-136 489.6 356 71.3
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 1.9e-129 466.5 347 66.0
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 1.6e-128 463.4 350 63.1
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 3.0e-127 459.1 314 74.5
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 8.7e-127 457.6 377 64.2
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 4.8e-125 451.8 383 65.5
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 6.3e-125 451.4 359 61.8
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 2.4e-124 449.5 351 61.3
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 9.4e-121 437.6 322 71.1
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 2.7e-120 436.0 322 70.5
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 4.4e-118 428.7 351 62.4
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 4.4e-118 428.7 427 55.3
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 6.3e-117 424.9 348 61.5
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 2.0e-115 419.9 252 83.7
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 7.2e-113 411.4 311 65.0
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 2.6e-110 402.9 396 56.6
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 1.1e-105 387.5 385 58.2
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 7.2e-105 384.8 375 54.7
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 9.4e-105 384.4 362 58.3
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 1.2e-102 377.5 369 58.3
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 8.2e-101 371.3 260 70.0
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 7.5e-94 348.2 315 55.2
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 4.8e-93 345.5 351 58.7
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 3.4e-86 322.8 323 48.3
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 5.9e-83 312.0 165 88.5
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 1.9e-81 307.0 247 63.2
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 4.7e-80 302.4 175 85.1
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 2.3e-79 300.1 175 85.7
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 1.2e-75 287.7 172 77.9
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 4.6e-75 285.8 191 77.0
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 1.1e-73 281.2 167 80.2
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 4.7e-72 275.8 173 78.6
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 1.9e-68 263.8 182 69.8
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 4.6e-67 259.2 175 78.9
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.3e-66 257.7 238 57.1
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 4.3e-65 252.7 179 76.0
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 4.4e-62 242.7 317 42.0
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 4.7e-56 222.6 172 66.9
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 6.8e-55 218.8 141 72.3
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 4.9e-53 212.6 123 75.6
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 2.3e-50 203.8 111 89.2
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 2.1e-48 197.2 108 80.6
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 5.4e-44 182.6 111 75.7
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 2.7e-43 180.3 134 67.2
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 3.5e-43 179.9 212 51.9
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 2.8e-40 170.2 139 63.3
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 1.5e-38 164.5 351 31.9
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 1.3e-37 161.4 91 82.4
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 3.8e-37 159.8 126 63.5
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 2.4e-36 157.1 94 74.5
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 1.8e-34 151.0 100 71.0
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 5.1e-34 149.4 133 58.6
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 3.3e-33 146.7 115 69.6
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 3.1e-31 140.2 102 67.6
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 8.4e-29 132.1 104 65.4
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 4.2e-28 129.8 75 80.0
Actinidia36322 Actinidia chinensis HOM05D006225 ORTHO05D007676 1.3e-26 124.8 82 75.6
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 2.1e-24 117.5 121 45.5
Eucgr.L03301 Eucalyptus grandis HOM05D006225 ORTHO05D007676 2.8e-24 117.1 79 74.7
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 4.5e-22 109.8 63 76.2
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 3.2e-20 103.6 75 69.3
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 5.5e-20 102.8 223 31.8
EL10Ac3g05120 Beta vulgaris HOM05D006555 ORTHO05D008376 1.0e-13 82.0 311 26.0
Lsat_1_v5_gn_0_24261 Lactuca sativa HOM05D006555 ORTHO05D008376 1.7e-13 81.3 362 25.4
Sc20g0004830 Simmondsia chinensis HOM05D006555 ORTHO05D008376 3.8e-13 80.1 337 26.1
arahy.Tifrunner.gnm1.ann1.LDE0EK Arachis hypogaea HOM05D006555 ORTHO05D008376 6.5e-13 79.3 272 25.4
TWI56G0535 Tripterygium wilfordii HOM05D006555 ORTHO05D008376 8.5e-13 79.0 318 26.1
HanXRQChr15g0474321 Helianthus annuus HOM05D006555 ORTHO05D008376 1.1e-12 78.6 341 26.7
Duzib187G0608 Durio zibethinus HOM05D006555 ORTHO05D008376 4.6e-11 73.2 314 25.8
BcaC04g24063 Brassica carinata HOM05D006225 ORTHO05D007676 2.3e-10 70.9 53 62.3
Manes.17G119457 Manihot esculenta HOM05D006555 ORTHO05D008376 5.1e-10 69.7 242 25.6
Sabra05G0090500 Salix brachista HOM05D006555 ORTHO05D008376 3.3e-09 67.0 240 27.5
Potri.005G110300 Populus trichocarpa HOM05D006555 ORTHO05D008376 4.3e-09 66.6 325 25.8
AUR62005932 Chenopodium quinoa HOM05D006555 ORTHO05D008376 9.7e-09 65.5 237 25.7
AUR62005935 Chenopodium quinoa HOM05D006555 ORTHO05D008376 9.7e-09 65.5 237 25.7
SEGI_26593 Sequoiadendron giganteum HOM05D006555 ORTHO05D008376 9.7e-09 65.5 156 29.5
Glyma.08G102000 Glycine max HOM05D006555 ORTHO05D008376 2.2e-08 64.3 330 24.5
ECA246G4860 Erigeron canadensis HOM05D006555 ORTHO05D008376 2.8e-08 63.9 223 27.4
VMungo0251G3141 Vigna mungo HOM05D006555 ORTHO05D008376 1.1e-07 62.0 254 26.0
Phvul.002G176300 Phaseolus vulgaris HOM05D006555 ORTHO05D008376 2.0e-06 57.8 235 26.0


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