Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G140300 Prunus persica HOM05D000003 ORTHO05D000022 9.6e-74 280.0 137 100.0
Prupe.1G509200 Prunus persica HOM05D000003 ORTHO05D000022 4.7e-28 128.3 147 46.3
Prupe.1G168800 Prunus persica HOM05D000003 ORTHO05D000022 1.6e-23 113.2 129 45.0
Prupe.1G162400 Prunus persica HOM05D000003 ORTHO05D000022 7.7e-23 110.9 143 44.1
Prupe.8G128400 Prunus persica HOM05D018000 ORTHO05D017022 1.0e-22 110.5 131 45.8
Prupe.7G010700 Prunus persica HOM05D000003 ORTHO05D000022 2.1e-20 102.8 137 41.6
FvH4_5g30341 Fragaria vesca HOM05D000003 ORTHO05D000022 2.8e-17 92.4 130 36.9
FvH4_5g35851 Fragaria vesca HOM05D000003 ORTHO05D000022 8.3e-17 90.9 132 37.1
FvH4_2g00771 Fragaria vesca HOM05D000003 ORTHO05D000022 2.7e-15 85.9 137 37.2
Prupe.6G185900 Prunus persica HOM05D000003 ORTHO05D000022 4.5e-15 85.1 99 43.4
RcHm_v2.0_Chr4g0422501 Rosa chinensis HOM05D000003 ORTHO05D000022 5.0e-14 81.6 138 34.1
FvH4_5g21911 Fragaria vesca HOM05D000003 ORTHO05D000022 8.5e-14 80.9 132 33.3
FvH4_4g27942 Fragaria vesca HOM05D000003 ORTHO05D000022 9.4e-13 77.4 139 34.5
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 1.2e-12 77.0 142 31.7
FvH4_6g16961 Fragaria vesca HOM05D000003 ORTHO05D000022 2.7e-12 75.9 139 33.8
RcHm_v2.0_Chr4g0393821 Rosa chinensis HOM05D000003 ORTHO05D000022 6.1e-12 74.7 135 34.1
RcHm_v2.0_Chr4g0404581 Rosa chinensis HOM05D000003 ORTHO05D000022 6.1e-12 74.7 143 30.8
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 1.2e-10 70.5 137 29.2
FvH4_1g24851 Fragaria vesca HOM05D000003 ORTHO05D000022 1.5e-10 70.1 111 34.2
FvH4_5g15581 Fragaria vesca HOM05D000003 ORTHO05D000022 2.0e-10 69.7 133 33.1
FAN27G2760 Fragaria x ananassa HOM05D000003 ORTHO05D000022 2.0e-10 69.7 113 36.3
FvH4_2g17721 Fragaria vesca HOM05D000003 ORTHO05D000022 2.6e-10 69.3 122 32.8
FvH4_6g20891 Fragaria vesca HOM05D000003 ORTHO05D000022 2.6e-10 69.3 144 32.6
FvH4_6g42141 Fragaria vesca HOM05D000003 ORTHO05D000022 2.6e-10 69.3 133 30.1
RcHm_v2.0_Chr1g0374401 Rosa chinensis HOM05D000106 ORTHO05D010272 2.6e-10 69.3 136 33.1
FvH4_6g34981 Fragaria vesca HOM05D000003 ORTHO05D000022 3.4e-10 68.9 122 30.3
RcHm_v2.0_Chr1g0356971 Rosa chinensis HOM05D000003 ORTHO05D000022 3.4e-10 68.9 133 28.6
PGSC0003DMG400035792 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.4e-10 68.9 136 32.4
FvH4_3g14411 Fragaria vesca HOM05D000003 ORTHO05D000022 4.4e-10 68.6 120 35.8
FvH4_5g23942 Fragaria vesca HOM05D002480 ORTHO05D003145 4.4e-10 68.6 109 37.6
FvH4_3g05211 Fragaria vesca HOM05D000003 ORTHO05D000022 5.7e-10 68.2 138 28.3
FvH4_2g21141 Fragaria vesca HOM05D000003 ORTHO05D000022 7.5e-10 67.8 120 34.2
FvH4_6g19462 Fragaria vesca HOM05D000003 ORTHO05D000022 7.5e-10 67.8 132 31.1
FvH4_4g17203 Fragaria vesca HOM05D000003 ORTHO05D000022 1.3e-09 67.0 130 31.5
FvH4_3g05300 Fragaria vesca HOM05D007074 ORTHO05D008542 1.7e-09 66.6 131 32.1
Prupe.3G103800 Prunus persica HOM05D000003 ORTHO05D000022 3.7e-09 65.5 49 59.2
arahy.Tifrunner.gnm1.ann1.GCX8RD Arachis hypogaea HOM05D000155 ORTHO05D000022 4.8e-09 65.1 134 28.4
FvH4_4g13392 Fragaria vesca HOM05D000003 ORTHO05D000022 4.8e-09 65.1 115 30.4
arahy.Tifrunner.gnm1.ann1.XP25HR Arachis hypogaea HOM05D000774 ORTHO05D000602 1.1e-08 63.9 134 27.6
FvH4_5g24522 Fragaria vesca HOM05D000003 ORTHO05D000022 1.4e-08 63.5 106 33.0
FvH4_5g19160 Fragaria vesca HOM05D000003 ORTHO05D025552 2.4e-08 62.8 132 29.5
FAN10G3451 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.4e-08 62.8 123 27.6
Hund22573 Selenicereus undatus HOM05D000003 ORTHO05D000022 2.4e-08 62.8 112 35.7
Sopen03g011360 Solanum pennellii HOM05D000155 ORTHO05D000022 3.1e-08 62.4 132 33.3
Lalb_Chr18g0059991 Lupinus albus HOM05D000155 ORTHO05D000022 4.1e-08 62.0 134 28.4
Lalb_Chr20g0122381 Lupinus albus HOM05D000155 ORTHO05D000022 9.1e-08 60.8 124 29.8
FvH4_4g30261 Fragaria vesca HOM05D000003 ORTHO05D000006 2.7e-07 59.3 106 32.1
Prupe.4G245300 Prunus persica HOM05D000155 ORTHO05D000022 3.5e-07 58.9 49 55.1
Sopen08g020500 Solanum pennellii HOM05D000155 ORTHO05D000022 4.5e-07 58.5 132 30.3
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 7.7e-07 57.8 134 27.6
FvH4_6g20921 Fragaria vesca HOM05D000003 ORTHO05D000022 1.0e-06 57.4 102 35.3
RcHm_v2.0_Chr1g0334811 Rosa chinensis HOM05D000003 ORTHO05D000022 1.0e-06 57.4 100 31.0
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 1.0e-06 57.4 132 31.1
Lj6g0012103 Lotus japonicus HOM05D000155 ORTHO05D000022 1.7e-06 56.6 135 29.6
Nitab4.5_0000129g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-06 56.6 99 33.3
Prupe.6G308300 Prunus persica HOM05D000003 ORTHO05D000022 1.7e-06 56.6 49 55.1
FvH4_2g33371 Fragaria vesca HOM05D000003 ORTHO05D000022 2.3e-06 56.2 110 30.9
TPR.G36747 Trifolium pratense HOM05D000155 ORTHO05D000022 2.3e-06 56.2 125 29.6
EL10Ac6g14087 Beta vulgaris HOM05D000003 ORTHO05D000167 3.8e-06 55.5 130 31.5
SHI31015 Sapria himalayana HOM05D000024 ORTHO05D000022 3.8e-06 55.5 118 33.1
Sopen04g016850 Solanum pennellii HOM05D000024 ORTHO05D000006 3.8e-06 55.5 132 28.0
Atru.chr10.890 Acer truncatum HOM05D000003 ORTHO05D000022 5.0e-06 55.1 132 30.3
FvH4_2g32021 Fragaria vesca HOM05D000003 ORTHO05D000022 5.0e-06 55.1 127 26.8
Sopen02g008700 Solanum pennellii HOM05D000003 ORTHO05D000022 5.0e-06 55.1 132 28.8
ClCG03G005440 Citrullus lanatus HOM05D000155 ORTHO05D000022 6.6e-06 54.7 133 27.8
SGA_v2.0_scaffold7G03916 Striga asiatica HOM05D000155 ORTHO05D000022 6.6e-06 54.7 137 27.7
FvH4_5g16792 Fragaria vesca HOM05D000003 ORTHO05D000022 8.6e-06 54.3 102 30.4
Nitab4.5_0000008g0280 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.6e-06 54.3 124 31.5
Nitab4.5_0004235g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.6e-06 54.3 107 33.6
Sopen02g002350 Solanum pennellii HOM05D000014 ORTHO05D000016 8.6e-06 54.3 132 30.3


User provided reference genes

Program Settings