Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G131500 Prunus persica HOM05D009046 ORTHO05D010499 2.8e-64 248.4 122 100.0
Prupe.2G131400 Prunus persica HOM05D009046 ORTHO05D010499 1.8e-39 166.0 113 72.6
Prupe.2G131600 Prunus persica HOM05D009046 ORTHO05D010499 3.4e-38 161.8 109 74.3
QL09p025537 Quercus lobata HOM05D009046 ORTHO05D010499 1.5e-17 93.2 112 44.6
QL09p042742 Quercus lobata HOM05D009046 ORTHO05D010499 7.3e-17 90.9 110 45.5
QL09p042668 Quercus lobata HOM05D009046 ORTHO05D010499 2.8e-16 89.0 100 45.0
Prupe.8G072400 Prunus persica HOM05D011519 ORTHO05D010499 6.2e-16 87.8 119 47.1
QL09p042663 Quercus lobata HOM05D009046 ORTHO05D010499 8.1e-16 87.4 104 46.2
Thecc.04G176200 Theobroma cacao HOM05D009046 ORTHO05D010499 3.4e-14 82.0 107 44.9
Prupe.8G072300 Prunus persica HOM05D011519 ORTHO05D010499 7.6e-14 80.9 121 47.1
QL09p042594 Quercus lobata HOM05D009046 ORTHO05D010499 7.6e-14 80.9 68 57.4
Atru.chr2.2398 Acer truncatum HOM05D009046 ORTHO05D010499 1.3e-13 80.1 103 45.6
Cfa015893 Carpinus fangiana HOM05D009046 ORTHO05D010499 1.3e-13 80.1 114 44.7
COL.COLO4_33068 Corchorus olitorius HOM05D009046 ORTHO05D010499 6.4e-13 77.8 112 41.1
Thecc.04G174700 Theobroma cacao HOM05D009046 ORTHO05D010499 6.4e-13 77.8 107 42.1
Cfa017052 Carpinus fangiana HOM05D009046 ORTHO05D010499 1.1e-12 77.0 94 43.6
COL.COLO4_33059 Corchorus olitorius HOM05D009046 ORTHO05D010499 5.4e-12 74.7 112 40.2
COL.COLO4_20670 Corchorus olitorius HOM05D009046 ORTHO05D010499 7.1e-12 74.3 108 40.7
Thecc.04G174900 Theobroma cacao HOM05D009046 ORTHO05D010499 1.6e-11 73.2 107 39.3
Thecc.04G174500 Theobroma cacao HOM05D009046 ORTHO05D010499 2.1e-11 72.8 107 40.2
Cpa.g.sc3.422 Carica papaya HOM05D009046 ORTHO05D010499 8.7e-10 67.4 106 38.7
FAN09G0582 Fragaria x ananassa HOM05D011519 ORTHO05D010499 5.6e-09 64.7 105 37.1
FAN09G3689 Fragaria x ananassa HOM05D011519 ORTHO05D010499 5.6e-09 64.7 105 38.1
QL07p032500 Quercus lobata HOM05D011519 ORTHO05D010499 5.6e-09 64.7 93 40.9
Manes.09G014201 Manihot esculenta HOM05D009046 ORTHO05D010499 2.1e-08 62.8 115 33.9
Haze_21160 Corylus avellana HOM05D009046 ORTHO05D010499 2.8e-08 62.4 82 42.7
FvH4_6g21652 Fragaria vesca HOM05D011519 ORTHO05D010499 3.7e-08 62.0 104 32.7
Cpa.g.sc76.56 Carica papaya HOM05D009046 ORTHO05D010499 4.8e-08 61.6 99 40.4
FAN14G2716 Fragaria x ananassa HOM05D011519 ORTHO05D010499 4.8e-08 61.6 103 33.0
Prupe.1G235700 Prunus persica HOM05D009046 ORTHO05D010499 8.1e-08 60.8 44 61.4
Nn2g10332 Nelumbo nucifera HOM05D009046 ORTHO05D010499 1.1e-07 60.5 111 33.3
QL07p032484 Quercus lobata HOM05D009046 ORTHO05D010499 1.4e-07 60.1 91 39.6
FAN12G0829 Fragaria x ananassa HOM05D011519 ORTHO05D010499 1.8e-07 59.7 103 33.0
FAN05G4016 Fragaria x ananassa HOM05D011519 ORTHO05D010499 2.4e-07 59.3 77 41.6
Manes.09G012601 Manihot esculenta HOM05D009046 ORTHO05D010499 4.0e-07 58.5 92 40.2
Cpa.g.c34620 Carica papaya HOM05D009046 ORTHO05D010499 5.3e-07 58.2 71 46.5
Ciclev10023880m.g Citrus clementina HOM05D009046 ORTHO05D010499 5.3e-07 58.2 71 42.3
FAN02G1285 Fragaria x ananassa HOM05D011519 ORTHO05D010499 5.3e-07 58.2 104 35.6
FvH4_6g10090 Fragaria vesca HOM05D019556 ORTHO05D017924 2.0e-06 56.2 114 32.5
FAN14G4714 Fragaria x ananassa HOM05D019556 ORTHO05D017924 2.0e-06 56.2 114 32.5
Manes.09G132801 Manihot esculenta HOM05D009046 ORTHO05D010499 2.6e-06 55.8 106 34.0
Ah.01g018500 Amaranthus hybridus HOM05D000057 ORTHO05D000021 4.5e-06 55.1 82 39.0
FAN11G1022 Fragaria x ananassa HOM05D041136 ORTHO05D010499 4.5e-06 55.1 69 43.5
TAR633G0605 Trochodendron aralioides HOM05D012974 ORTHO05D012969 5.8e-06 54.7 111 32.4
TAR613G0003 Trochodendron aralioides HOM05D000057 ORTHO05D010499 7.6e-06 54.3 108 34.3
Cpa.g.sc34.167 Carica papaya HOM05D009046 ORTHO05D010499 1.0e-05 53.9 110 36.4
PGR119G0114 Punica granatum HOM05D009046 ORTHO05D010499 1.0e-05 53.9 104 32.7


User provided reference genes

Program Settings