Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 1.3e-176 622.9 305 100.0
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 6.5e-131 471.1 328 75.9
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 7.8e-108 394.4 327 64.5
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 5.8e-103 378.3 327 62.4
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 7.8e-100 367.9 327 60.9
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.1e-98 364.0 335 60.0
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.3e-98 362.5 335 59.7
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.8e-97 359.4 332 58.7
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 6.8e-96 354.8 301 65.8
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 2.7e-92 342.8 345 56.5
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.7e-91 340.1 331 57.4
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 3.9e-91 339.0 334 56.9
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 7.3e-90 334.7 334 56.6
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 4.7e-89 332.0 338 54.4
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 1.4e-88 330.5 329 54.7
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 1.4e-88 330.5 337 54.3
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 3.1e-88 329.3 326 57.1
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 1.2e-87 327.4 329 54.1
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 3.4e-87 325.9 330 55.5
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 2.2e-86 323.2 335 54.9
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 4.6e-84 315.5 334 53.9
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.7e-83 313.5 337 51.9
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.7e-83 313.5 337 51.9
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 3.0e-83 312.8 335 53.4
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 3.9e-83 312.4 331 54.4
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 5.1e-83 312.0 334 53.3
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 6.6e-83 311.6 332 53.9
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 6.6e-83 311.6 327 54.1
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 1.5e-82 310.5 335 51.0
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 7.3e-82 308.1 329 51.4
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 1.6e-81 307.0 334 53.3
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 2.8e-81 306.2 333 52.6
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 4.7e-81 305.4 329 50.8
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 4.7e-81 305.4 331 51.4
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 1.1e-80 304.3 330 50.6
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 3.1e-80 302.8 327 52.3
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 1.2e-79 300.8 335 51.9
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 4.4e-79 298.9 330 51.8
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 9.9e-79 297.7 335 50.1
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 2.2e-78 296.6 328 49.7
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 6.4e-78 295.0 336 49.4
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 1.1e-77 294.3 336 49.1
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 2.4e-77 293.1 335 49.9
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 1.6e-76 290.4 330 49.7
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 2.1e-76 290.0 335 49.3
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 1.0e-75 287.7 336 49.1
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.0e-75 287.7 332 48.5
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 1.3e-75 287.3 329 50.5
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 1.3e-75 287.3 324 50.3
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.7e-75 287.0 334 50.3
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 5.1e-75 285.4 327 50.5
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 8.7e-75 284.6 329 49.5
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 8.7e-75 284.6 333 50.5
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 1.5e-74 283.9 333 50.2
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 4.3e-74 282.3 332 47.0
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 7.3e-74 281.6 324 51.5
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 7.3e-74 281.6 334 49.4
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 2.8e-73 279.6 322 47.8
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 2.8e-73 279.6 333 48.6
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 2.8e-73 279.6 334 49.4
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 3.6e-73 279.3 335 49.6
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 4.8e-73 278.9 338 47.9
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 4.8e-73 278.9 334 49.1
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 4.8e-73 278.9 327 48.3
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 4.8e-73 278.9 338 47.9
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 1.1e-72 277.7 326 48.8
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 1.1e-72 277.7 326 48.8
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 3.1e-72 276.2 333 49.2
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 4.0e-72 275.8 338 47.9
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 1.5e-71 273.9 324 48.1
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 1.5e-71 273.9 331 46.5
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 2.6e-71 273.1 333 48.3
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 3.4e-71 272.7 339 46.0
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 2.9e-70 269.6 327 49.2
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 3.8e-70 269.2 323 48.0
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 8.4e-70 268.1 333 48.3
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 1.4e-69 267.3 330 47.6
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 4.2e-69 265.8 323 47.7
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 5.4e-69 265.4 366 47.0
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 1.2e-68 264.2 332 47.6
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 2.1e-68 263.5 307 51.8
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 2.1e-68 263.5 330 47.6
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 2.1e-68 263.5 333 44.4
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 3.5e-68 262.7 333 45.9
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 3.9e-67 259.2 325 45.8
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 1.1e-66 257.7 296 49.0
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 5.6e-66 255.4 290 51.0
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 2.1e-65 253.4 286 50.0
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.1e-64 251.1 297 47.8
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 6.9e-64 248.4 269 52.8
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 4.3e-58 229.2 337 42.1
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 5.5e-53 212.2 269 46.8
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 3.5e-52 209.5 316 42.7
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 4.6e-52 209.1 334 41.0
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 4.6e-52 209.1 329 42.2
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 3.9e-51 206.1 340 38.5
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 6.7e-51 205.3 329 39.2
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 9.7e-50 201.4 263 44.9
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 2.8e-49 199.9 353 39.1
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 2.0e-47 193.7 350 36.9
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 1.4e-45 187.6 333 36.9
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 8.7e-43 178.3 186 52.2
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 2.0e-39 167.2 185 49.2
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 7.9e-36 155.2 384 31.2
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.1e-34 151.4 383 31.3
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 6.9e-32 142.1 153 52.9
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 1.1e-29 134.8 118 56.8
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 7.2e-29 132.1 118 58.5
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 3.3e-26 123.2 117 55.6
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 4.8e-25 119.4 100 63.0
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 4.5e-23 112.8 201 37.3
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 1.3e-22 111.3 107 57.9
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.2e-20 104.8 118 49.2
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 4.7e-20 102.8 316 26.3
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 8.0e-20 102.1 95 55.8
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 7.0e-16 89.0 94 51.1
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 7.7e-15 85.5 82 56.1
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 2.9e-14 83.6 99 48.5
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 7.2e-13 79.0 144 39.6
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 9.4e-13 78.6 252 27.4
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 1.5e-10 71.2 56 58.9
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 7.5e-10 68.9 59 61.0


User provided reference genes

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