Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G120900 Prunus persica HOM05D003685 ORTHO05D003168 5.8e-29 130.2 65 100.0
Prupe.7G023700 Prunus persica HOM05D000135 ORTHO05D000203 1.0e-12 76.3 43 90.7
RcHm_v2.0_Chr7g0178551 Rosa chinensis HOM05D000135 ORTHO05D000203 2.7e-10 68.2 44 79.5
MD13G1184700 Malus domestica HOM05D000135 ORTHO05D000203 6.7e-09 63.5 42 76.2
MD06G1216800 Malus domestica HOM05D003685 ORTHO05D003168 1.3e-07 59.3 44 70.5
MBI19_g13914_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000203 1.6e-07 58.9 42 69.0
Duzib138G0999 Durio zibethinus HOM05D003685 ORTHO05D003168 2.2e-07 58.5 42 69.0
MBI12_g30397_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D003168 2.2e-07 58.5 42 73.8
MD03G1137400 Malus domestica HOM05D003685 ORTHO05D003168 2.8e-07 58.2 44 68.2
ClCG03G008650 Citrullus lanatus HOM05D003685 ORTHO05D003168 3.7e-07 57.8 42 71.4
MELO3C022853.2 Cucumis melo HOM05D003685 ORTHO05D003168 6.3e-07 57.0 42 71.4
THA.LOC104812167 Tarenaya hassleriana HOM05D000135 ORTHO05D000203 8.2e-07 56.6 42 66.7
Hma1.2p1_0158F.1_g069870 Hydrangea macrophylla HOM05D000135 ORTHO05D003168 1.1e-06 56.2 42 64.3
CsaV3_5G024070 Cucumis sativus L. HOM05D000964 ORTHO05D003168 1.4e-06 55.8 42 69.0
Glyma.07G101100 Glycine max HOM05D000135 ORTHO05D000203 1.4e-06 55.8 42 64.3
Hma1.2p1_0283F.1_g113440 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 1.4e-06 55.8 42 61.9
Sed0024816 Sechium edule HOM05D003685 ORTHO05D003168 1.4e-06 55.8 42 69.0
SEGI_29834 Sequoiadendron giganteum HOM05D000135 ORTHO05D000203 1.8e-06 55.5 42 59.5
Sed0020121 Sechium edule HOM05D003685 ORTHO05D003168 2.4e-06 55.1 42 69.0
Sc10g0000750 Simmondsia chinensis HOM05D003685 ORTHO05D003168 2.4e-06 55.1 42 69.0
BcaC07g38900 Brassica carinata HOM05D000135 ORTHO05D000203 3.1e-06 54.7 42 61.9
C08p18480 Brassica napus HOM05D000135 ORTHO05D000203 3.1e-06 54.7 42 61.9
BolC5t30348H Brassica oleracea HOM05D000135 ORTHO05D000203 3.1e-06 54.7 42 61.9
BolC8t49480H Brassica oleracea HOM05D000135 ORTHO05D000203 3.1e-06 54.7 42 61.9
Lalb_Chr09g0330421 Lupinus albus HOM05D000135 ORTHO05D000203 3.1e-06 54.7 42 64.3
Nitab4.5_0009467g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000203 3.1e-06 54.7 42 64.3
Nitab4.5_0011970g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000203 3.1e-06 54.7 42 64.3
CSS0039227 Camellia sinensis var. sinensis HOM05D003685 ORTHO05D003168 4.1e-06 54.3 42 66.7
Hma1.2p1_2524F.1_g323910 Hydrangea macrophylla HOM05D000135 ORTHO05D003168 4.1e-06 54.3 42 64.3
SEGI_31669 Sequoiadendron giganteum HOM05D000135 ORTHO05D000203 4.1e-06 54.3 42 57.1
TWI32G0063 Tripterygium wilfordii HOM05D000135 ORTHO05D000203 4.1e-06 54.3 41 65.9
vmacro22373 Vaccinium macrocarpon HOM05D014992 ORTHO05D003168 4.1e-06 54.3 42 66.7
vmacro22897 Vaccinium macrocarpon HOM05D003685 ORTHO05D003168 4.1e-06 54.3 42 66.7
Hma1.2p1_0575F.1_g181800 Hydrangea macrophylla HOM05D003685 ORTHO05D003168 5.3e-06 53.9 41 65.9
Lalb_Chr15g0084851 Lupinus albus HOM05D003685 ORTHO05D003168 5.3e-06 53.9 42 66.7
Oeu000910.1 Olea europaea HOM05D003685 ORTHO05D003168 5.3e-06 53.9 42 66.7
AL1G30580 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 6.9e-06 53.5 42 61.9
AT1G18210 Arabidopsis thaliana HOM05D000135 ORTHO05D000203 6.9e-06 53.5 42 61.9
Carub.0001s1785 Capsella rubella HOM05D000135 ORTHO05D000203 6.9e-06 53.5 42 61.9
CARHR018790 Cardamine hirsuta HOM05D000135 ORTHO05D000203 6.9e-06 53.5 42 61.9
Hma1.2p1_0739F.1_g211160 Hydrangea macrophylla HOM05D000135 ORTHO05D003168 6.9e-06 53.5 41 65.9
Lsat_1_v5_gn_2_79940 Lactuca sativa HOM05D003685 ORTHO05D003168 6.9e-06 53.5 42 66.7
PGR004G0993 Punica granatum HOM05D003685 ORTHO05D003168 6.9e-06 53.5 42 66.7
Thecc.04G119100 Theobroma cacao HOM05D003685 ORTHO05D003168 6.9e-06 53.5 42 64.3
Dinv14887 Davidia involucrata HOM05D000559 ORTHO05D000596 9.0e-06 53.1 41 68.3
Hma1.2p1_0669F.1_g200160 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 9.0e-06 53.1 42 59.5
Hma1.2p1_0729F.1_g209710 Hydrangea macrophylla HOM05D000135 ORTHO05D003168 9.0e-06 53.1 41 63.4
PSO017G3116 Papaver somniferum HOM05D000135 ORTHO05D000203 9.0e-06 53.1 42 61.9
PSO170G0694 Papaver somniferum HOM05D003685 ORTHO05D003168 9.0e-06 53.1 42 61.9
PSO478G4477 Papaver somniferum HOM05D000135 ORTHO05D000203 9.0e-06 53.1 42 61.9


User provided reference genes

Program Settings