Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G120100 Prunus persica HOM05D007841 ORTHO05D009919 3.3e-33 144.4 72 100.0
Phvul.008G138900 Phaseolus vulgaris HOM05D007841 ORTHO05D009919 2.6e-30 134.8 72 91.7
EL10Ac1g00736 Beta vulgaris HOM05D007841 ORTHO05D009919 4.5e-30 134.0 72 90.3
Medtr7g050540 Medicago truncatula HOM05D007841 ORTHO05D009919 4.5e-30 134.0 72 91.7
Duzib138G1421 Durio zibethinus HOM05D007841 ORTHO05D009919 1.3e-29 132.5 72 88.9
MD02G1221100 Malus domestica HOM05D007841 ORTHO05D009919 1.3e-29 132.5 72 91.7
Psat3g152880 Pisum sativum HOM05D007841 ORTHO05D009919 1.3e-29 132.5 72 90.3
Gohir.D12G101400 Gossypium hirsutum HOM05D007841 ORTHO05D009919 3.8e-29 131.0 72 87.5
Gorai.008G110500 Gossypium raimondii HOM05D007841 ORTHO05D009919 3.8e-29 131.0 72 87.5
Lj1g0014858 Lotus japonicus HOM05D007841 ORTHO05D009919 3.8e-29 131.0 72 90.3
CiPaw.14G018000 Carya illinoinensis HOM05D007841 ORTHO05D009919 6.5e-29 130.2 72 88.9
Glyma.08G340600 Glycine max HOM05D007841 ORTHO05D009919 8.4e-29 129.8 72 88.9
Hma1.2p1_2138F.1_g314930 Hydrangea macrophylla HOM05D007841 ORTHO05D009919 1.1e-28 129.4 71 87.3
RcHm_v2.0_Chr1g0345181 Rosa chinensis HOM05D007841 ORTHO05D009919 1.1e-28 129.4 71 90.1
COL.COLO4_12370 Corchorus olitorius HOM05D007841 ORTHO05D009919 1.9e-28 128.6 72 86.1
Atru.chr5.91 Acer truncatum HOM05D007841 ORTHO05D009919 3.2e-28 127.9 71 85.9
Gohir.A12G098200 Gossypium hirsutum HOM05D007841 ORTHO05D009919 3.2e-28 127.9 72 84.7
MD07G1096500 Malus domestica HOM05D007841 ORTHO05D009919 3.2e-28 127.9 71 91.5
Oeu034848.1 Olea europaea HOM05D007841 ORTHO05D009919 3.2e-28 127.9 72 83.3
HanXRQChr01g0019691 Helianthus annuus HOM05D007841 ORTHO05D009919 7.1e-28 126.7 71 85.9
Cc02_g25410 Coffea canephora HOM05D007841 ORTHO05D009919 9.3e-28 126.3 70 82.9
Potri.014G051850 Populus trichocarpa HOM05D007841 ORTHO05D009919 2.1e-27 125.2 72 83.3
PGR004G1954 Punica granatum HOM05D007841 ORTHO05D009919 3.5e-27 124.4 70 85.7
ECA248G0141 Erigeron canadensis HOM05D007841 ORTHO05D009919 6.0e-27 123.6 71 84.5
Lsat_1_v5_gn_1_83981 Lactuca sativa HOM05D007841 ORTHO05D009919 6.0e-27 123.6 71 84.5
Manes.05G057100 Manihot esculenta HOM05D007841 ORTHO05D009919 6.0e-27 123.6 66 87.9
CAN.G756.38 Capsicum annuum HOM05D007841 ORTHO05D009919 7.9e-27 123.2 70 84.3
Eucgr.D01199 Eucalyptus grandis HOM05D007841 ORTHO05D009919 1.3e-26 122.5 72 81.9
Actinidia30942 Actinidia chinensis HOM05D007841 ORTHO05D009919 2.3e-26 121.7 65 90.8
arahy.Tifrunner.gnm1.ann1.K94MSK Arachis hypogaea HOM05D007841 ORTHO05D009919 2.3e-26 121.7 69 85.5
Solyc01g088770.3 Solanum lycopersicum HOM05D007841 ORTHO05D009919 2.3e-26 121.7 70 80.0
Sopen01g035610 Solanum pennellii HOM05D007841 ORTHO05D009919 2.3e-26 121.7 70 80.0
PGSC0003DMG400001726 Solanum tuberosum HOM05D007841 ORTHO05D009919 2.3e-26 121.7 70 80.0
CsaV3_3G010620 Cucumis sativus L. HOM05D007841 ORTHO05D009919 3.0e-26 121.3 70 84.3
Lalb_Chr03g0040951 Lupinus albus HOM05D007841 ORTHO05D009919 3.9e-26 120.9 72 83.3
CANSAT25G3347 Cannabis sativa HOM05D007841 ORTHO05D009919 5.1e-26 120.6 65 89.2
CANSAT25G3825 Cannabis sativa HOM05D007841 ORTHO05D009919 5.1e-26 120.6 65 89.2
THA.LOC104814059 Tarenaya hassleriana HOM05D007841 ORTHO05D009919 6.7e-26 120.2 68 88.2
Thecc.01G400700 Theobroma cacao HOM05D007841 ORTHO05D009919 1.9e-25 118.6 74 83.8
AL1G10060 Arabidopsis lyrata HOM05D007841 ORTHO05D009919 3.3e-25 117.9 72 81.9
AT1G02160 Arabidopsis thaliana HOM05D007841 ORTHO05D009919 5.7e-25 117.1 72 80.6
FvH4_7g09140 Fragaria vesca HOM05D007841 ORTHO05D009919 5.7e-25 117.1 71 83.1
Carub.0001s0004 Capsella rubella HOM05D007841 ORTHO05D009919 7.4e-25 116.7 72 80.6
ClCG05G003010 Citrullus lanatus HOM05D007841 ORTHO05D009919 7.4e-25 116.7 71 80.3
PSO675G0834 Papaver somniferum HOM05D007841 ORTHO05D009919 7.4e-25 116.7 67 83.6
Aqoxy7G00835 Aquilegia oxysepala HOM05D007841 ORTHO05D009919 1.6e-24 115.5 65 87.7
Sed0011386 Sechium edule HOM05D007841 ORTHO05D009919 1.6e-24 115.5 70 81.4
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 2.1e-24 115.2 63 88.9
CARHR000160 Cardamine hirsuta HOM05D007841 ORTHO05D009919 2.8e-24 114.8 63 88.9
Thhalv10009237m.g Eutrema salsugineum HOM05D007841 ORTHO05D009919 2.8e-24 114.8 73 80.8
PSO732G0215 Papaver somniferum HOM05D007841 ORTHO05D009919 3.7e-24 114.4 67 82.1
C05p00040 Brassica napus HOM05D007841 ORTHO05D009919 8.2e-24 113.2 63 87.3
BolC5t28791H Brassica oleracea HOM05D007841 ORTHO05D009919 8.2e-24 113.2 63 87.3
Migut.N01723 Erythranthe guttata HOM05D007841 ORTHO05D009919 1.4e-23 112.5 70 80.0
Haze_02887 Corylus avellana HOM05D000061 ORTHO05D000915 1.8e-23 112.1 60 86.7
FAN06G3108 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.5e-22 109.0 66 81.8
Hund17114 Selenicereus undatus HOM05D007841 ORTHO05D009919 4.5e-22 107.5 56 87.5
GSVIVG01018320001 Vitis vinifera HOM05D007841 ORTHO05D009919 5.8e-22 107.1 72 75.0
Zm00001eb067220 Zea mays HOM05D007841 ORTHO05D009919 5.8e-22 107.1 65 83.1
Os04g0665000 Oryza sativa ssp. japonica HOM05D007841 ORTHO05D009919 2.2e-21 105.1 67 79.1
Nitab4.5_0004425g0050 Nicotiana tabacum HOM05D007841 ORTHO05D009919 8.4e-21 103.2 62 77.4
unitig_22.g6702 Utricularia gibba HOM05D007841 ORTHO05D009919 3.2e-20 101.3 63 76.2
CSS0006405 Camellia sinensis var. sinensis HOM05D007841 ORTHO05D009919 1.6e-19 99.0 55 83.6
Ciclev10023064m.g Citrus clementina HOM05D007841 ORTHO05D009919 1.6e-19 99.0 50 90.0
Peaxi162Scf00793g00363 Petunia axillaris HOM05D007841 ORTHO05D009919 2.1e-19 98.6 54 81.5
arahy.Tifrunner.gnm1.ann1.X5EUJ4 Arachis hypogaea HOM05D007841 ORTHO05D009919 2.7e-19 98.2 54 85.2
AUR62023385 Chenopodium quinoa HOM05D007841 ORTHO05D009919 6.1e-19 97.1 56 82.1
Nn6g33742 Nelumbo nucifera HOM05D007841 ORTHO05D009919 6.1e-19 97.1 56 80.4
AUR62013771 Chenopodium quinoa HOM05D007841 ORTHO05D009919 7.9e-19 96.7 56 80.4
Sc02g0003210 Simmondsia chinensis HOM05D007841 ORTHO05D009919 2.3e-18 95.1 55 78.2
FAN01G1055 Fragaria x ananassa HOM05D007841 ORTHO05D009919 3.0e-18 94.7 69 72.5
FAN03G2201 Fragaria x ananassa HOM05D007841 ORTHO05D009919 3.0e-18 94.7 69 72.5
SalBow4G0679 Salvia bowleyana HOM05D007841 ORTHO05D009919 3.9e-18 94.4 55 78.2
PSO732G0130 Papaver somniferum HOM05D007841 ORTHO05D009919 5.7e-17 90.5 51 80.4
BraA10t42285Z Brassica rapa HOM05D007841 ORTHO05D009919 4.8e-16 87.4 58 74.1
Sp1g00090 Schrenkiella parvula HOM05D007841 ORTHO05D009919 4.8e-16 87.4 57 75.4
Pp3c22_2080 Physcomitrium patens HOM05D007841 ORTHO05D009919 2.0e-14 82.0 68 60.3
Aa31LG1G11570 Aethionema arabicum HOM05D007841 ORTHO05D009919 2.9e-13 78.2 48 79.2
Sabra14G0036700 Salix brachista HOM05D007841 ORTHO05D009919 6.5e-13 77.0 41 90.2
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 7.2e-12 73.6 45 80.0
AagrBONN_evm.TU.Sc2ySwM_228.3132 Anthoceros agrestis HOM05D007841 ORTHO05D009919 1.6e-11 72.4 53 66.0
Mapoly0181s0011 Marchantia polymorpha HOM05D007841 ORTHO05D009919 1.4e-10 69.3 70 51.4
Actinidia05779 Actinidia chinensis HOM05D007841 ORTHO05D009919 8.8e-10 66.6 33 90.9
CAN.G756.35 Capsicum annuum HOM05D007841 ORTHO05D009919 9.7e-09 63.2 46 69.6
AUR62043409 Chenopodium quinoa HOM05D007841 ORTHO05D009919 2.6e-06 55.1 30 83.3
Eucgr.G01056 Eucalyptus grandis HOM05D003560 ORTHO05D009919 3.4e-06 54.7 30 83.3


User provided reference genes

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