Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G116800 Prunus persica HOM05D004865 ORTHO05D005949 1.4e-124 449.5 213 100.0
Prupe.2G116900 Prunus persica HOM05D004865 ORTHO05D005949 5.7e-65 251.5 204 64.7
MD09G1162900 Malus domestica HOM05D004865 ORTHO05D005949 7.7e-62 241.1 215 55.8
MD09G1162700 Malus domestica HOM05D004865 ORTHO05D005949 1.3e-61 240.4 215 56.3
Sed0022242 Sechium edule HOM05D004865 ORTHO05D005949 3.6e-59 232.3 215 55.8
ClCG03G011170 Citrullus lanatus HOM05D004865 ORTHO05D005949 8.8e-58 227.6 215 55.3
ClCG11G000590 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.1e-57 227.3 214 56.5
ClCG11G000680 Citrullus lanatus HOM05D004865 ORTHO05D005949 4.4e-57 225.3 218 55.0
ClCG03G011140 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.3e-56 223.8 215 54.4
MD09G1162600 Malus domestica HOM05D004865 ORTHO05D005949 5.3e-55 218.4 212 55.2
Lj3A898T31 Lonicera japonica HOM05D004865 ORTHO05D005949 2.0e-54 216.5 214 53.3
MD17G1147700 Malus domestica HOM05D004865 ORTHO05D005949 1.3e-53 213.8 188 55.3
MD05G1102400 Malus domestica HOM05D004865 ORTHO05D005949 1.7e-53 213.4 212 54.7
MELO3C010083.2 Cucumis melo HOM05D004865 ORTHO05D005949 6.1e-51 204.9 213 49.8
CsaV3_1G044030 Cucumis sativus L. HOM05D004865 ORTHO05D005949 1.1e-49 200.7 211 48.3
Hma1.2p1_0543F.1_g175180 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 3.1e-47 192.6 212 49.1
Hma1.2p1_3336F.1_g335335 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 3.1e-47 192.6 212 49.1
FAN22G1472 Fragaria x ananassa HOM05D004865 ORTHO05D005949 7.7e-46 188.0 216 46.3
MD09G1163100 Malus domestica HOM05D004865 ORTHO05D005949 1.7e-45 186.8 216 50.0
Actinidia30932 Actinidia chinensis HOM05D004865 ORTHO05D005949 5.5e-44 181.8 215 47.4
Actinidia30931 Actinidia chinensis HOM05D004865 ORTHO05D005949 6.1e-43 178.3 215 46.5
FvH4_6g36010 Fragaria vesca HOM05D004865 ORTHO05D005949 1.2e-41 174.1 219 44.3
HanXRQChr14g0437021 Helianthus annuus HOM05D000041 ORTHO05D000452 4.4e-41 172.2 208 44.7
FAN02G0162 Fragaria x ananassa HOM05D004865 ORTHO05D005949 1.7e-40 170.2 205 44.9
FAN09G4882 Fragaria x ananassa HOM05D004865 ORTHO05D005949 6.3e-40 168.3 242 40.9
Prupe.1G577300 Prunus persica HOM05D004865 ORTHO05D005949 1.1e-39 167.5 178 50.0
Lsat_1_v5_gn_8_2701 Lactuca sativa HOM05D000041 ORTHO05D000452 3.1e-39 166.0 213 42.3
Gohir.D10G128100 Gossypium hirsutum HOM05D004865 ORTHO05D005949 4.1e-39 165.6 209 39.2
Gorai.011G141300 Gossypium raimondii HOM05D004865 ORTHO05D005949 4.1e-39 165.6 209 39.2
Gohir.A10G138700 Gossypium hirsutum HOM05D004865 ORTHO05D005949 7.0e-39 164.9 209 39.2
Sc24g0002410 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.6e-38 163.7 223 43.9
Duzib052G0039 Durio zibethinus HOM05D004865 ORTHO05D005949 2.7e-38 162.9 204 44.1
MD17G1148100 Malus domestica HOM05D004865 ORTHO05D005949 7.7e-38 161.4 158 53.8
MD17G1148200 Malus domestica HOM05D004865 ORTHO05D005949 7.7e-38 161.4 158 53.8
MD17G1148000 Malus domestica HOM05D004865 ORTHO05D005949 1.3e-37 160.6 216 42.6
EL10Ac8g20499 Beta vulgaris HOM05D004865 ORTHO05D005949 2.9e-37 159.5 203 40.4
Actinidia05767 Actinidia chinensis HOM05D004865 ORTHO05D005949 3.8e-37 159.1 210 41.0
AUR62031151 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.8e-37 159.1 203 40.9
Sc24g0002420 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.8e-37 159.1 223 43.5
AUR62036568 Chenopodium quinoa HOM05D004865 ORTHO05D005949 6.5e-37 158.3 203 40.9
AUR62012544 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.1e-36 157.5 219 40.6
Duzib212G1045 Durio zibethinus HOM05D004865 ORTHO05D005949 1.1e-36 157.5 210 43.8
Sc22g0001760 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.5e-36 156.4 215 42.8
Sc22g0001730 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.2e-36 156.0 217 42.9
Sc22g0001740 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.2e-36 156.0 216 40.7
EL10As6g23632 Beta vulgaris HOM05D004865 ORTHO05D005949 2.7e-35 152.9 217 38.2
DCAR_016015 Daucus carota HOM05D004865 ORTHO05D005949 2.7e-35 152.9 207 41.1
ECA233G0690 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.7e-35 152.9 207 42.0
Ah.14g087230 Amaranthus hybridus HOM05D004865 ORTHO05D005949 3.6e-35 152.5 208 39.4
DCAR_015954 Daucus carota HOM05D004865 ORTHO05D005949 1.0e-34 151.0 204 40.7
Hma1.2p1_1768F.1_g301530 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 1.0e-34 151.0 142 51.4
Sc06g0005920 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.0e-34 151.0 210 41.4
Sc09g0006340 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.0e-34 151.0 217 41.9
Sc09g0006530 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.4e-34 150.6 193 44.6
Sc22g0001710 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.3e-34 149.8 217 43.8
AUR62014652 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.0e-34 149.1 211 42.7
Os04g0308500 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 2.0e-33 146.7 203 41.4
Os04g0310100 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 2.0e-33 146.7 203 41.4
Sc02g0003580 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.0e-33 146.7 215 41.9
Zm00001eb137370 Zea mays HOM05D004865 ORTHO05D005949 2.0e-33 146.7 202 40.6
Sc09g0006350 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.4e-33 146.0 216 39.4
EL10As6g23631 Beta vulgaris HOM05D004865 ORTHO05D005949 5.7e-33 145.2 217 36.4
Cre07.g321800 Chlamydomonas reinhardtii HOM05D004865 ORTHO05D005949 9.8e-33 144.4 226 39.8
Zm00001eb137430 Zea mays HOM05D004865 ORTHO05D005949 1.3e-32 144.1 207 40.6
AUR62031152 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.8e-32 142.9 210 38.6
DCAR_015955 Daucus carota HOM05D004865 ORTHO05D005949 3.7e-32 142.5 204 40.2
Sc09g0006330 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.7e-32 142.5 203 39.9
Lj6P373T4 Lonicera japonica HOM05D004865 ORTHO05D005949 6.3e-32 141.7 125 54.4
DCAR_016016 Daucus carota HOM05D004865 ORTHO05D005949 8.3e-32 141.4 204 39.2
AUR62036569 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.8e-31 140.2 205 39.0
Ah.06g181840 Amaranthus hybridus HOM05D004865 ORTHO05D005949 4.1e-31 139.0 216 38.9
Ah.14g087240 Amaranthus hybridus HOM05D004865 ORTHO05D005949 5.4e-31 138.7 205 39.5
SGA_v2.0_scaffold11G05644 Striga asiatica HOM05D004865 ORTHO05D005949 9.2e-31 137.9 210 38.1
Ah.14g087250 Amaranthus hybridus HOM05D004865 ORTHO05D005949 1.2e-30 137.5 148 47.3
AUR62044724 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.6e-30 137.1 211 41.2
Lj6C375T0 Lonicera japonica HOM05D004865 ORTHO05D005949 2.0e-30 136.7 170 42.9
Sc23g0005380 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.0e-30 136.7 205 41.5
AUR62027396 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.5e-30 136.0 173 43.4
Lj1P308T9 Lonicera japonica HOM05D004865 ORTHO05D005949 3.5e-30 136.0 124 50.0
Lj6P378T3 Lonicera japonica HOM05D004865 ORTHO05D005949 7.7e-30 134.8 125 52.0
Lj6P379T11 Lonicera japonica HOM05D004865 ORTHO05D005949 7.7e-30 134.8 125 52.0
Sc22g0001720 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.7e-30 134.8 178 46.1
Lj1P314T6 Lonicera japonica HOM05D004865 ORTHO05D005949 1.3e-29 134.0 124 49.2
Lj6P371T8 Lonicera japonica HOM05D004865 ORTHO05D005949 1.3e-29 134.0 125 51.2
Lj1P501T11 Lonicera japonica HOM05D004865 ORTHO05D005949 2.9e-29 132.9 124 49.2
Lj1P506T13 Lonicera japonica HOM05D004865 ORTHO05D005949 2.9e-29 132.9 124 49.2
CSS0027528 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 3.8e-29 132.5 200 42.5
Sc22g0001750 Simmondsia chinensis HOM05D004865 ORTHO05D005949 5.0e-29 132.1 214 39.7
Lj1P506T10 Lonicera japonica HOM05D004865 ORTHO05D005949 1.5e-28 130.6 139 46.0
Lj1P515T6 Lonicera japonica HOM05D004865 ORTHO05D005949 1.5e-28 130.6 139 46.0
AUR62027395 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.8e-27 126.3 192 41.7
CSS0032746 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 4.7e-27 125.6 199 39.7
CSS0005385 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 6.1e-27 125.2 202 41.1
Sc17g0004370 Simmondsia chinensis HOM05D004865 ORTHO05D005949 6.8e-26 121.7 158 42.4
Os04g0308400 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 8.9e-26 121.3 202 35.6
Os04g0310200 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 8.9e-26 121.3 202 35.6
SGA_v2.0_scaffold163G38046 Striga asiatica HOM05D004865 ORTHO05D005949 2.6e-25 119.8 210 33.3
AUR62012571 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.4e-25 119.0 170 37.6
AUR62014649 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.4e-25 119.0 150 43.3
EL10Ac8g20500 Beta vulgaris HOM05D004865 ORTHO05D005949 7.5e-25 118.2 203 36.5
FAN14G5541 Fragaria x ananassa HOM05D004865 ORTHO05D005949 1.7e-24 117.1 99 55.6
Sc23g0005400 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.2e-24 116.7 140 47.1
CSS0028314 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 6.4e-24 115.2 225 38.7
HanXRQChr03g0060851 Helianthus annuus HOM05D004865 ORTHO05D005949 1.1e-23 114.4 214 38.8
HanXRQChr03g0060861 Helianthus annuus HOM05D004865 ORTHO05D005949 1.8e-23 113.6 213 38.5
FAN14G3467 Fragaria x ananassa HOM05D004865 ORTHO05D005949 2.7e-22 109.8 99 52.5
Sc16g0002960 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.6e-22 109.0 140 42.1
Lj6P371T11 Lonicera japonica HOM05D004865 ORTHO05D005949 7.8e-22 108.2 92 55.4
Zm00001eb137410 Zea mays HOM05D004865 ORTHO05D005949 1.0e-21 107.8 202 33.2
AUR62044116 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.3e-21 107.5 144 42.4
AUR62012547 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.3e-21 106.7 208 33.7
ECA233G5215 Erigeron canadensis HOM05D004865 ORTHO05D005949 3.9e-21 105.9 211 33.2
ECA233G6014 Erigeron canadensis HOM05D004865 ORTHO05D005949 3.9e-21 105.9 217 34.6
ECA233G1731 Erigeron canadensis HOM05D004865 ORTHO05D005949 6.6e-21 105.1 140 42.9
Ah.14g087270 Amaranthus hybridus HOM05D004865 ORTHO05D005949 8.6e-21 104.8 181 35.9
Zm00001eb137380 Zea mays HOM05D004865 ORTHO05D005949 1.1e-20 104.4 202 32.2
SGA_v2.0_scaffold11G05649 Striga asiatica HOM05D004865 ORTHO05D005949 1.9e-20 103.6 171 36.3
SGA_v2.0_scaffold105G30447 Striga asiatica HOM05D004865 ORTHO05D005949 2.5e-20 103.2 212 29.7
Sc16g0002940 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.7e-19 99.0 111 44.1
Sc24g0002440 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.1e-18 96.3 155 38.7
ECA233G2698 Erigeron canadensis HOM05D004865 ORTHO05D005949 4.0e-18 95.9 216 30.6
AUR62014650 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.4e-17 92.8 96 51.0
ECA233G0596 Erigeron canadensis HOM05D004865 ORTHO05D000001 7.5e-17 91.7 162 35.8
HanXRQChr17g0555801 Helianthus annuus HOM05D004865 ORTHO05D005949 4.9e-16 89.0 139 40.3
HanXRQChr17g0555831 Helianthus annuus HOM05D004865 ORTHO05D005949 4.9e-16 89.0 139 40.3
CSS0013136 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 1.9e-15 87.0 144 36.8
Sed0001554 Sechium edule HOM05D004865 ORTHO05D034719 2.7e-14 83.2 219 32.0
AUR62012550 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.5e-14 82.8 212 29.2
MELO3C031484.2 Cucumis melo HOM05D004865 ORTHO05D005949 7.8e-14 81.6 226 31.4
Sed0006015 Sechium edule HOM05D004865 ORTHO05D034719 7.8e-14 81.6 215 31.2
ClCG11G011710 Citrullus lanatus HOM05D004865 ORTHO05D034719 1.3e-13 80.9 218 32.6
HanXRQChr03g0085651 Helianthus annuus HOM05D004865 ORTHO05D005949 5.0e-13 79.0 220 31.4
HanXRQChr13g0416751 Helianthus annuus HOM05D004865 ORTHO05D005949 6.6e-13 78.6 220 31.4
HanXRQChr13g0416771 Helianthus annuus HOM05D004865 ORTHO05D005949 6.6e-13 78.6 220 31.4
HanXRQChr14g0461501 Helianthus annuus HOM05D004865 ORTHO05D005949 6.6e-13 78.6 111 38.7
Lsat_1_v5_gn_6_87560 Lactuca sativa HOM05D004865 ORTHO05D005949 8.6e-13 78.2 208 30.8
EL10Ac6g13635 Beta vulgaris HOM05D004865 ORTHO05D005949 1.9e-12 77.0 213 28.6
HanXRQChr13g0416741 Helianthus annuus HOM05D004865 ORTHO05D005949 2.5e-12 76.6 222 32.9
EL10Ac6g13634 Beta vulgaris HOM05D004865 ORTHO05D005949 4.3e-12 75.9 108 38.0
CsaV3_4G030090 Cucumis sativus L. HOM05D004865 ORTHO05D005949 5.6e-12 75.5 58 58.6
Lsat_1_v5_gn_0_11001 Lactuca sativa HOM05D004865 ORTHO05D005949 4.7e-11 72.4 221 30.8
ECA233G5781 Erigeron canadensis HOM05D004865 ORTHO05D005949 1.8e-10 70.5 140 30.7
Sc05g0005670 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.5e-09 67.4 76 48.7
Sed0017379 Sechium edule HOM05D004865 ORTHO05D005949 1.7e-08 63.9 154 28.6
Sed0020964 Sechium edule HOM05D004865 ORTHO05D005949 6.4e-08 62.0 109 35.8
ClCG03G010280 Citrullus lanatus HOM05D004865 ORTHO05D005949 8.3e-08 61.6 50 66.0
AUR62001167 Chenopodium quinoa HOM05D009434 ORTHO05D011504 1.1e-07 61.2 195 26.2
Duzib128G0495 Durio zibethinus HOM05D014226 ORTHO05D016989 1.1e-07 61.2 136 33.1
Duzib128G0597 Durio zibethinus HOM05D014226 ORTHO05D016989 1.4e-07 60.8 136 33.1
Sc24g0002640 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.9e-07 60.5 146 27.4
Duzib128G0362 Durio zibethinus HOM05D014226 ORTHO05D016989 2.4e-07 60.1 128 31.2
Duzib128G0388 Durio zibethinus HOM05D014226 ORTHO05D016989 2.4e-07 60.1 128 31.2
Duzib128G0451 Durio zibethinus HOM05D014226 ORTHO05D016989 2.4e-07 60.1 128 31.2
Duzib128G1533 Durio zibethinus HOM05D014226 ORTHO05D016989 2.4e-07 60.1 128 31.2
Duzib151G0560 Durio zibethinus HOM05D014226 ORTHO05D016989 2.4e-07 60.1 128 31.2
AUR62022156 Chenopodium quinoa HOM05D009434 ORTHO05D011504 2.1e-06 57.0 195 24.6
Thecc.05G188900 Theobroma cacao HOM05D004865 ORTHO05D005949 4.6e-06 55.8 92 35.9
Sed0001119 Sechium edule HOM05D004865 ORTHO05D005949 6.0e-06 55.5 157 28.7
AUR62014648 Chenopodium quinoa HOM05D004865 ORTHO05D005949 7.8e-06 55.1 64 45.3


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