Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G109900 Prunus persica HOM05D007785 ORTHO05D008997 1.6e-44 182.6 106 100.0
MD02G1229100 Malus domestica HOM05D007785 ORTHO05D008997 2.3e-19 99.0 90 61.1
MD07G1083000 Malus domestica HOM05D007785 ORTHO05D008997 8.9e-19 97.1 90 62.2
FvH4_7g07910 Fragaria vesca HOM05D007785 ORTHO05D008997 1.6e-15 86.3 90 56.7
FAN06G1471 Fragaria x ananassa HOM05D007785 ORTHO05D008997 1.6e-15 86.3 90 56.7
FAN10G3075 Fragaria x ananassa HOM05D007785 ORTHO05D008997 1.6e-15 86.3 90 56.7
QL04p025073 Quercus lobata HOM05D007785 ORTHO05D008997 2.1e-15 85.9 89 52.8
RcHm_v2.0_Chr1g0341401 Rosa chinensis HOM05D007785 ORTHO05D008997 2.1e-15 85.9 90 56.7
Prupe.2G110100 Prunus persica HOM05D007785 ORTHO05D008997 2.7e-15 85.5 83 62.7
Atru.chr5.15 Acer truncatum HOM05D007785 ORTHO05D008997 3.5e-15 85.1 92 51.1
FAN01G0084 Fragaria x ananassa HOM05D007785 ORTHO05D008997 6.0e-15 84.3 90 55.6
ClCG05G002700 Citrullus lanatus HOM05D007785 ORTHO05D008997 3.0e-14 82.0 90 52.2
FAN03G1138 Fragaria x ananassa HOM05D007785 ORTHO05D008997 3.9e-14 81.6 90 54.4
CiPaw.13G020000 Carya illinoinensis HOM05D007785 ORTHO05D008997 4.7e-12 74.7 87 54.0
CsaV3_3G010180 Cucumis sativus L. HOM05D007785 ORTHO05D008997 4.7e-12 74.7 88 47.7
MELO3C006238.2 Cucumis melo HOM05D007785 ORTHO05D008997 1.4e-11 73.2 88 48.9
Gohir.A13G011800 Gossypium hirsutum HOM05D007785 ORTHO05D008997 3.1e-11 72.0 85 51.8
Sed0016926 Sechium edule HOM05D007785 ORTHO05D008997 4.0e-11 71.6 80 50.0
Sed0022240 Sechium edule HOM05D007785 ORTHO05D008997 4.0e-11 71.6 87 48.3
Peaxi162Scf01144g00004 Petunia axillaris HOM05D007785 ORTHO05D008997 5.2e-11 71.2 90 45.6
CSS0006779 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 6.8e-11 70.9 91 45.1
Haze_02930 Corylus avellana HOM05D007785 ORTHO05D008997 1.2e-10 70.1 87 51.7
Peaxi162Scf00901g00032 Petunia axillaris HOM05D007785 ORTHO05D008997 2.0e-10 69.3 97 40.2
Cc02_g26020 Coffea canephora HOM05D007785 ORTHO05D008997 5.8e-10 67.8 93 44.1
Nitab4.5_0001476g0130 Nicotiana tabacum HOM05D007785 ORTHO05D008997 5.8e-10 67.8 90 45.6
Nitab4.5_0006705g0010 Nicotiana tabacum HOM05D007785 ORTHO05D008997 1.3e-09 66.6 90 43.3
Gohir.D13G012700 Gossypium hirsutum HOM05D007785 ORTHO05D008997 1.7e-09 66.2 88 48.9
Hma1.2p1_0021F.1_g014470 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 3.8e-09 65.1 87 46.0
Rhsim01G0145700 Rhododendron simsii HOM05D007785 ORTHO05D008997 4.9e-09 64.7 100 44.0
Dinv43998 Davidia involucrata HOM05D007785 ORTHO05D008997 6.4e-09 64.3 80 48.8
Nitab4.5_0000166g0090 Nicotiana tabacum HOM05D007785 ORTHO05D008997 8.4e-09 63.9 90 42.2
Gorai.013G013800 Gossypium raimondii HOM05D007785 ORTHO05D008997 1.1e-08 63.5 83 49.4
Nn1g00585 Nelumbo nucifera HOM05D007785 ORTHO05D008997 1.4e-08 63.2 90 42.2
Actinidia05806 Actinidia chinensis HOM05D007785 ORTHO05D008997 1.9e-08 62.8 90 41.1
MSTRG.17094 Avicennia marina HOM05D007785 ORTHO05D008997 3.2e-08 62.0 96 40.6
Sopen01g032480 Solanum pennellii HOM05D007785 ORTHO05D008997 3.2e-08 62.0 86 46.5
Aqoxy3G02467 Aquilegia oxysepala HOM05D007785 ORTHO05D008997 5.4e-08 61.2 101 41.6
TAR375G1071 Trochodendron aralioides HOM05D007785 ORTHO05D008997 5.4e-08 61.2 86 40.7
TAR636G3686 Trochodendron aralioides HOM05D007785 ORTHO05D008997 5.4e-08 61.2 88 40.9
Hma1.2p1_0601F.1_g187290 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 7.1e-08 60.8 90 42.2
TAR374G0344 Trochodendron aralioides HOM05D007785 ORTHO05D008997 7.1e-08 60.8 94 39.4
Migut.B01462 Erythranthe guttata HOM05D007785 ORTHO05D008997 9.2e-08 60.5 90 41.1
Nn6g33639 Nelumbo nucifera HOM05D007785 ORTHO05D008997 9.2e-08 60.5 89 41.6
Solyc01g080890.2 Solanum lycopersicum HOM05D007785 ORTHO05D008997 1.2e-07 60.1 86 43.0
Nitab4.5_0003887g0040 Nicotiana tabacum HOM05D007785 ORTHO05D008997 2.1e-07 59.3 79 45.6
PGSC0003DMG400001700 Solanum tuberosum HOM05D007785 ORTHO05D008997 2.7e-07 58.9 86 45.3
ECA234G3743 Erigeron canadensis HOM05D007785 ORTHO05D008997 3.5e-07 58.5 94 38.3
Manes.15G169900 Manihot esculenta HOM05D007785 ORTHO05D008997 4.6e-07 58.2 87 41.4
Sabra01G0113200 Salix brachista HOM05D007785 ORTHO05D008997 4.6e-07 58.2 94 35.1
Lalb_Chr09g0329531 Lupinus albus HOM05D007785 ORTHO05D008997 7.8e-07 57.4 83 44.6
Phvul.003G229200 Phaseolus vulgaris HOM05D007785 ORTHO05D008997 7.8e-07 57.4 71 49.3
Oeu021958.1 Olea europaea HOM05D007785 ORTHO05D008997 1.3e-06 56.6 90 41.1
SalBow4G1855 Salvia bowleyana HOM05D007785 ORTHO05D008997 2.3e-06 55.8 88 39.8
Cc08_g02350 Coffea canephora HOM05D007785 ORTHO05D008997 3.0e-06 55.5 92 41.3
Ciclev10023085m.g Citrus clementina HOM05D007785 ORTHO05D008997 8.6e-06 53.9 82 42.7


User provided reference genes

Program Settings