Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G108100 Prunus persica HOM05D007872 ORTHO05D009937 3.8e-147 525.0 301 100.0
MD07G1082500 Malus domestica HOM05D007872 ORTHO05D009937 2.0e-68 263.5 274 56.2
MD11G1285300 Malus domestica HOM05D007872 ORTHO05D009937 4.9e-46 189.1 276 48.6
Prupe.8G241200 Prunus persica HOM05D007872 ORTHO05D009937 1.9e-42 177.2 253 47.8
ClCG07G000250 Citrullus lanatus HOM05D007872 ORTHO05D009937 1.8e-32 144.1 236 42.4
Dinv32936 Davidia involucrata HOM05D007872 ORTHO05D009937 5.8e-31 139.0 169 50.9
CiPaw.07G091500 Carya illinoinensis HOM05D007872 ORTHO05D009937 1.3e-30 137.9 174 49.4
Cfa006139 Carpinus fangiana HOM05D007872 ORTHO05D009937 7.1e-29 132.1 259 39.8
GSVIVG01011084001 Vitis vinifera HOM05D007872 ORTHO05D009937 1.6e-28 131.0 257 43.6
Atru.chr5.1435 Acer truncatum HOM05D007872 ORTHO05D009937 1.1e-26 124.8 190 45.3
Actinidia09132 Actinidia chinensis HOM05D007872 ORTHO05D009937 2.5e-26 123.6 184 45.7
Duzib138G0833 Durio zibethinus HOM05D007872 ORTHO05D009937 9.6e-26 121.7 172 46.5
Hma1.2p1_0257F.1_g103430 Hydrangea macrophylla HOM05D007872 ORTHO05D009937 9.6e-26 121.7 250 34.8
RcHm_v2.0_Chr6g0291061 Rosa chinensis HOM05D007872 ORTHO05D009937 2.8e-25 120.2 244 38.5
Actinidia00751 Actinidia chinensis HOM05D007872 ORTHO05D009937 4.8e-25 119.4 184 44.0
Haze_04711 Corylus avellana HOM05D007872 ORTHO05D009937 1.8e-24 117.5 223 39.5
Ciclev10021692m.g Citrus clementina HOM05D007872 ORTHO05D009937 2.6e-23 113.6 252 36.1
QL12p021900 Quercus lobata HOM05D007872 ORTHO05D009937 1.7e-22 110.9 301 39.2
Thecc.01G279500 Theobroma cacao HOM05D007872 ORTHO05D009937 2.2e-22 110.5 169 49.1
Gohir.D11G127900 Gossypium hirsutum HOM05D007872 ORTHO05D009937 3.8e-22 109.8 170 45.9
Gorai.007G136800 Gossypium raimondii HOM05D007872 ORTHO05D009937 3.8e-22 109.8 170 45.9
Manes.01G207800 Manihot esculenta HOM05D007872 ORTHO05D009937 8.4e-22 108.6 191 40.3
Gohir.A11G122600 Gossypium hirsutum HOM05D007872 ORTHO05D009937 1.1e-21 108.2 170 45.3
TAR636G2863 Trochodendron aralioides HOM05D007872 ORTHO05D009937 1.4e-21 107.8 209 38.8
Phvul.001G150900 Phaseolus vulgaris HOM05D007872 ORTHO05D009937 3.5e-20 103.2 212 40.6
FvH4_2g23590 Fragaria vesca HOM05D007872 ORTHO05D009937 6.0e-20 102.4 230 36.5
FAN24G1414 Fragaria x ananassa HOM05D007872 ORTHO05D009937 6.0e-20 102.4 230 36.5
FAN20G0751 Fragaria x ananassa HOM05D007872 ORTHO05D009937 1.0e-19 101.7 232 36.6
FAN27G2143 Fragaria x ananassa HOM05D007872 ORTHO05D009937 6.7e-19 99.0 237 35.4
VMungo1383G2390 Vigna mungo HOM05D007872 ORTHO05D009937 1.1e-18 98.2 287 32.4
Nn4g26249 Nelumbo nucifera HOM05D007872 ORTHO05D009937 1.5e-18 97.8 181 40.9
Sabra05G0159400 Salix brachista HOM05D007872 ORTHO05D009937 2.5e-18 97.1 175 41.1
Potri.002G053200 Populus trichocarpa HOM05D007872 ORTHO05D009937 7.4e-18 95.5 186 36.6
Sed0020585 Sechium edule HOM05D007872 ORTHO05D009937 7.4e-18 95.5 172 37.2
COL.COLO4_09098 Corchorus olitorius HOM05D007872 ORTHO05D009937 1.6e-17 94.4 171 39.8
Eucgr.H01481 Eucalyptus grandis HOM05D007872 ORTHO05D009937 2.8e-17 93.6 265 32.5
Sabra02G0043300 Salix brachista HOM05D007872 ORTHO05D009937 5.3e-16 89.4 186 34.9
Nn1g02225 Nelumbo nucifera HOM05D007872 ORTHO05D009937 7.6e-15 85.5 256 32.0
Glyma.19G155900 Glycine max HOM05D007872 ORTHO05D009937 2.2e-14 84.0 298 29.5
Cc01_g19490 Coffea canephora HOM05D007872 ORTHO05D009937 1.9e-13 80.9 136 40.4
Dinv34750 Davidia involucrata HOM05D007872 ORTHO05D009937 2.5e-13 80.5 213 37.1
Lalb_Chr01g0020171 Lupinus albus HOM05D007872 ORTHO05D009937 3.2e-13 80.1 283 28.6
Lj1g0016134 Lotus japonicus HOM05D007872 ORTHO05D009937 4.2e-13 79.7 204 34.8
Rhsim13G0024700 Rhododendron simsii HOM05D007872 ORTHO05D009937 5.5e-13 79.3 186 34.4
ClCG09G007050 Citrullus lanatus HOM05D007872 ORTHO05D009937 1.6e-12 77.8 208 33.2
Aqoxy2G03330 Aquilegia oxysepala HOM05D007872 ORTHO05D009937 6.0e-12 75.9 208 36.1
Ca_08581_v3 Cicer arietinum L. HOM05D007872 ORTHO05D009937 1.3e-11 74.7 259 31.3
Sed0010054 Sechium edule HOM05D007872 ORTHO05D009937 1.3e-11 74.7 221 33.9
arahy.Tifrunner.gnm1.ann1.DRZ1BY Arachis hypogaea HOM05D007872 ORTHO05D009937 1.8e-11 74.3 212 32.5
Sed0027392 Sechium edule HOM05D007872 ORTHO05D009937 1.8e-11 74.3 185 36.2
arahy.Tifrunner.gnm1.ann1.KH7FSY Arachis hypogaea HOM05D007872 ORTHO05D009937 2.3e-11 73.9 212 32.1
Sed0014848 Sechium edule HOM05D007872 ORTHO05D009937 5.1e-11 72.8 75 53.3
MSTRG.12565 Avicennia marina HOM05D007872 ORTHO05D009937 1.5e-10 71.2 203 32.0
FAN15G1096 Fragaria x ananassa HOM05D007872 ORTHO05D009937 1.9e-10 70.9 102 45.1
Manes.05G076300 Manihot esculenta HOM05D007872 ORTHO05D009937 5.6e-10 69.3 142 37.3
DCAR_012474 Daucus carota HOM05D007872 ORTHO05D009937 1.6e-09 67.8 161 37.9
Migut.O00823 Erythranthe guttata HOM05D007872 ORTHO05D009937 3.7e-09 66.6 204 30.4
MELO3C015834.2 Cucumis melo HOM05D007872 ORTHO05D009937 6.2e-09 65.9 182 33.0
Migut.N02058 Erythranthe guttata HOM05D007872 ORTHO05D009937 6.2e-09 65.9 204 30.4
TPR.G9919 Trifolium pratense HOM05D007872 ORTHO05D009937 1.4e-08 64.7 133 37.6
DCAR_002735 Daucus carota HOM05D007872 ORTHO05D009937 1.8e-08 64.3 245 29.4
Cpa.g.sc131.13 Carica papaya HOM05D007872 ORTHO05D009937 5.3e-08 62.8 239 27.6
Migut.O00518 Erythranthe guttata HOM05D007872 ORTHO05D009937 5.3e-08 62.8 130 38.5
Glyma.03G153500 Glycine max HOM05D007872 ORTHO05D009937 2.0e-07 60.8 84 45.2
Potri.005G209300 Populus trichocarpa HOM05D007872 ORTHO05D009937 4.5e-07 59.7 116 37.1


User provided reference genes

Program Settings