Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 9.8e-181 636.7 332 100.0
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 2.7e-170 602.1 326 96.0
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.9e-169 598.2 332 93.7
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 8.6e-169 597.0 332 93.4
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 8.6e-169 597.0 332 94.3
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.3e-168 594.7 332 93.1
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 2.1e-167 592.4 326 92.0
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 2.1e-167 592.4 332 91.3
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 2.8e-167 592.0 335 90.7
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 3.6e-167 591.7 332 91.6
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 4.7e-167 591.3 329 92.1
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 8.0e-167 590.5 332 91.3
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 4.0e-166 588.2 332 90.7
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 4.0e-166 588.2 325 92.3
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 6.8e-166 587.4 326 92.0
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 6.8e-166 587.4 326 91.1
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.2e-165 586.6 332 90.4
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 1.5e-165 586.3 330 90.9
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 5.8e-165 584.3 329 90.6
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 4.9e-164 581.3 326 90.8
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.9e-164 581.3 329 90.6
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 8.3e-164 580.5 332 89.8
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 8.3e-164 580.5 329 90.6
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.9e-163 579.3 335 90.1
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.9e-163 579.3 335 90.1
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 2.4e-163 578.9 332 88.3
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 4.1e-163 578.2 329 89.1
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 4.1e-163 578.2 330 89.1
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 5.4e-163 577.8 332 88.3
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.2e-162 576.6 326 89.6
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.0e-161 573.5 332 87.0
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.3e-161 573.2 332 87.0
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.7e-161 572.8 332 87.7
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 2.3e-161 572.4 332 86.7
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 3.9e-161 571.6 332 88.9
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 8.6e-161 570.5 332 86.7
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.1e-160 570.1 359 82.5
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 1.5e-160 569.7 331 89.1
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 1.9e-160 569.3 328 86.9
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.9e-160 569.3 326 88.7
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 2.5e-160 568.9 332 88.6
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 7.3e-160 567.4 332 88.3
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 7.3e-160 567.4 326 88.7
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 9.5e-160 567.0 326 89.6
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 9.5e-160 567.0 332 88.6
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 9.5e-160 567.0 331 88.8
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.1e-159 565.8 326 88.0
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.1e-159 565.8 326 88.0
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 2.1e-159 565.8 332 85.8
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 2.8e-159 565.5 332 87.3
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 3.6e-159 565.1 327 87.5
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 4.7e-159 564.7 338 87.3
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 4.7e-159 564.7 332 85.8
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 4.7e-159 564.7 326 87.7
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 6.2e-159 564.3 332 85.5
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 8.1e-159 563.9 332 85.5
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 1.4e-158 563.1 326 88.7
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 1.8e-158 562.8 325 86.8
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 3.1e-158 562.0 325 86.8
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 3.1e-158 562.0 332 87.7
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 3.1e-158 562.0 332 87.7
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 3.1e-158 562.0 325 86.8
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.0e-158 561.6 331 87.9
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 8.9e-158 560.5 331 87.9
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 8.9e-158 560.5 325 87.1
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 1.2e-157 560.1 332 86.1
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 2.6e-157 558.9 333 85.0
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 2.6e-157 558.9 386 78.0
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 4.4e-157 558.1 326 87.4
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 9.9e-157 557.0 373 80.7
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 1.3e-156 556.6 326 86.2
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 1.7e-156 556.2 332 85.2
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 3.7e-156 555.1 333 84.7
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 6.4e-156 554.3 332 87.0
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 6.4e-156 554.3 326 86.8
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.4e-155 553.1 326 86.8
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 1.4e-155 553.1 326 86.5
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 1.4e-155 553.1 326 86.5
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.9e-155 552.7 326 86.5
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 2.4e-155 552.4 326 86.2
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 2.4e-155 552.4 324 88.0
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 2.4e-155 552.4 325 87.1
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 3.2e-155 552.0 326 86.2
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 3.2e-155 552.0 326 86.5
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 3.2e-155 552.0 326 86.5
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 3.2e-155 552.0 326 86.5
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 3.2e-155 552.0 326 86.5
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 1.6e-154 549.7 455 67.7
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 2.1e-154 549.3 326 85.6
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 5.1e-153 544.7 331 84.0
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 8.6e-153 543.9 332 88.9
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 1.5e-152 543.1 331 83.7
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 4.0e-150 535.0 314 86.3
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 9.9e-149 530.4 331 84.6
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 9.9e-149 530.4 325 83.4
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 2.2e-148 529.3 326 83.1
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.9e-148 528.9 303 88.4
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.0e-145 520.4 327 83.5
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 8.6e-145 517.3 300 86.3
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.1e-144 516.9 330 81.8
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 1.1e-142 510.4 326 80.4
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.0e-142 508.4 377 74.5
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 1.2e-141 506.9 327 80.4
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.6e-141 505.8 302 85.8
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 1.3e-137 493.4 330 75.8
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 3.0e-137 492.3 333 76.3
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 1.6e-135 486.5 332 78.3
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 2.0e-133 479.6 327 74.3
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.4e-133 478.8 326 77.3
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 3.5e-130 468.8 329 76.0
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 2.3e-129 466.1 335 75.2
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 3.3e-128 462.2 279 83.2
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 7.1e-115 417.9 323 69.7
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 5.7e-112 408.3 234 88.9
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 1.1e-110 404.1 330 60.3
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.8e-110 403.3 233 86.7
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 9.0e-110 401.0 330 63.3
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 5.9e-109 398.3 318 63.2
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 5.7e-104 381.7 318 66.4
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 4.8e-103 378.6 271 73.8
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.3e-97 359.8 332 66.3
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 3.0e-97 359.4 197 95.4
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 2.2e-92 343.2 223 78.9
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.4e-91 340.5 239 70.7
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 7.2e-91 338.2 332 60.5
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 3.0e-89 332.8 220 82.7
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.7e-87 327.0 220 80.9
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.8e-81 307.0 220 78.2
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 9.7e-80 301.2 167 89.8
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 1.2e-74 284.3 165 88.5
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 1.6e-74 283.9 333 46.2
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 8.0e-74 281.6 165 85.5
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 4.5e-69 265.8 326 52.5
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 4.7e-66 255.8 267 55.8
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 3.4e-64 249.6 135 91.9
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 2.1e-58 230.3 135 88.9
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.9e-47 192.6 102 93.1
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.6e-45 187.6 159 65.4
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 1.6e-42 177.6 150 62.7
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 1.5e-40 171.0 92 96.7
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 4.4e-40 169.5 103 85.4
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.0e-36 158.3 89 87.6
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 1.7e-36 157.5 189 52.4
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 2.6e-32 143.7 69 97.1
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.6e-32 143.7 77 93.5
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 1.7e-31 141.0 91 82.4
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 2.4e-30 137.1 88 77.3
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 3.2e-30 136.7 82 82.9
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 1.9e-27 127.5 74 85.1
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 4.3e-27 126.3 91 72.5
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 1.8e-25 120.9 67 95.5
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.0e-25 119.8 75 77.3
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 3.4e-24 116.7 151 46.4
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 4.9e-23 112.8 69 82.6
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 1.3e-20 104.8 65 84.6
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 3.7e-10 70.1 85 51.8
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 4.5e-08 63.2 34 85.3
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 5.8e-08 62.8 33 87.9


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