Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 2.1e-231 805.4 448 100.0
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 1.3e-191 673.3 452 86.7
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 3.5e-181 638.6 457 82.9
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 3.8e-172 608.6 449 77.1
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 2.9e-159 565.8 451 70.5
FAN03G1223 Fragaria x ananassa HOM05D004969 ORTHO05D006085 6.4e-151 538.1 482 65.1
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 5.4e-142 508.4 395 73.2
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 1.8e-137 493.4 464 62.7
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 1.8e-137 493.4 410 68.5
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 1.5e-136 490.3 464 62.5
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 2.0e-136 490.0 438 63.2
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 7.6e-136 488.0 450 63.8
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 2.5e-131 473.0 457 63.0
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 6.2e-130 468.4 456 62.1
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 1.2e-128 464.2 449 62.1
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 2.0e-128 463.4 465 61.7
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 2.0e-128 463.4 448 62.7
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 9.9e-128 461.1 430 62.1
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 1.3e-127 460.7 431 62.4
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 2.2e-127 459.9 449 61.7
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 3.8e-127 459.1 388 66.5
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 4.9e-127 458.8 408 64.0
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 1.1e-126 457.6 438 62.8
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 1.1e-126 457.6 447 60.9
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 2.4e-126 456.4 453 60.3
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 2.4e-126 456.4 413 64.4
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 5.4e-126 455.3 383 66.1
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 9.3e-126 454.5 376 68.1
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 9.3e-126 454.5 389 66.6
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 1.6e-125 453.8 420 62.4
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 2.7e-125 453.0 441 61.2
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 4.6e-125 452.2 395 64.6
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 6.0e-125 451.8 442 59.3
Dinv41780 Davidia involucrata HOM05D004969 ORTHO05D006085 6.0e-125 451.8 374 67.1
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 1.0e-124 451.1 451 67.4
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 1.3e-124 450.7 443 60.9
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 5.1e-124 448.7 415 61.9
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 1.1e-123 447.6 431 61.7
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 2.5e-123 446.4 450 60.2
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 3.3e-123 446.0 395 65.6
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 2.1e-122 443.4 455 59.3
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 4.8e-122 442.2 435 58.6
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 1.4e-121 440.7 414 62.6
Sopen11g010590 Solanum pennellii HOM05D004969 ORTHO05D006085 1.4e-121 440.7 421 61.8
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 2.4e-121 439.9 414 62.6
Solyc11g020300.2 Solanum lycopersicum HOM05D004969 ORTHO05D006085 2.4e-121 439.9 421 61.5
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 5.3e-121 438.7 463 59.0
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 6.9e-121 438.3 422 60.2
CDE04G1977 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 2.6e-120 436.4 389 64.8
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 4.5e-120 435.6 382 66.0
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 9.9e-120 434.5 393 62.3
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 8.4e-119 431.4 414 61.6
Nn5g27434 Nelumbo nucifera HOM05D004969 ORTHO05D006085 1.4e-118 430.6 444 64.4
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 4.2e-118 429.1 415 61.4
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 4.2e-118 429.1 436 59.9
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 7.1e-118 428.3 393 62.1
Rhsim12G0005600 Rhododendron simsii HOM05D004969 ORTHO05D006085 1.6e-117 427.2 498 54.2
Cc10_g11320 Coffea canephora HOM05D004969 ORTHO05D006085 7.9e-117 424.9 403 61.3
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 7.9e-117 424.9 450 56.9
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 1.3e-116 424.1 447 56.8
Sabra17G0108000 Salix brachista HOM05D004969 ORTHO05D006085 3.9e-116 422.5 410 61.2
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 5.1e-116 422.2 458 55.9
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 1.5e-115 420.6 439 58.8
Psat5g144880 Pisum sativum HOM05D004969 ORTHO05D006085 1.9e-115 420.2 446 62.1
ATR1136G165 Amborella trichopoda HOM05D004969 ORTHO05D006085 2.5e-115 419.9 375 62.9
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 1.4e-113 414.1 379 59.9
Gohir.D07G082700 Gossypium hirsutum HOM05D004969 ORTHO05D006085 3.9e-108 396.0 328 68.6
Carub.0006s1483 Capsella rubella HOM05D004969 ORTHO05D006085 4.3e-107 392.5 420 55.2
Thhalv10013528m.g Eutrema salsugineum HOM05D004969 ORTHO05D006085 7.4e-107 391.7 422 55.5
Lsat_1_v5_gn_1_25461 Lactuca sativa HOM05D004969 ORTHO05D006085 6.3e-106 388.7 455 52.5
A10p22590 Brassica napus HOM05D004969 ORTHO05D006085 6.9e-105 385.2 399 56.6
BraA10t44321Z Brassica rapa HOM05D004969 ORTHO05D006085 6.9e-105 385.2 399 56.6
Sc23g0001560 Simmondsia chinensis HOM05D004969 ORTHO05D006085 1.2e-104 384.4 468 51.5
HPP92_004464 Vanilla planifolia HOM05D004969 ORTHO05D006085 1.7e-103 380.6 392 56.4
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 3.8e-103 379.4 427 55.0
THA.LOC104827189 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 3.8e-103 379.4 436 51.4
BolC2t06766H Brassica oleracea HOM05D004969 ORTHO05D006085 1.4e-100 370.9 420 53.3
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 1.8e-100 370.5 406 56.9
BolC9t58883H Brassica oleracea HOM05D004969 ORTHO05D006085 3.9e-100 369.4 422 54.0
Sp6g27550 Schrenkiella parvula HOM05D004969 ORTHO05D006085 8.8e-100 368.2 414 56.3
BraA02t05337Z Brassica rapa HOM05D004969 ORTHO05D006085 1.1e-99 367.9 419 53.5
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 1.5e-99 367.5 393 56.7
Os04g0439900 Oryza sativa ssp. japonica HOM05D004969 ORTHO05D006085 6.3e-98 362.1 397 54.7
Hma1.2p1_0342F.1_g130660 Hydrangea macrophylla HOM05D004969 ORTHO05D006085 1.8e-97 360.5 331 63.7
C09p60500 Brassica napus HOM05D004969 ORTHO05D006085 9.1e-97 358.2 424 53.3
THA.LOC104802933 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 2.0e-96 357.1 409 57.9
BcaB08g36833 Brassica carinata HOM05D004969 ORTHO05D006085 1.0e-95 354.8 417 52.8
Zm00001eb082230 Zea mays HOM05D004969 ORTHO05D006085 2.2e-95 353.6 452 50.9
HPP92_004490 Vanilla planifolia HOM05D004969 ORTHO05D006085 5.0e-95 352.4 444 50.0
PGSC0003DMG400023281 Solanum tuberosum HOM05D004969 ORTHO05D006085 2.1e-93 347.1 336 62.5
unitig_8.g3641 Utricularia gibba HOM05D004969 ORTHO05D006085 1.1e-91 341.3 383 55.9
arahy.Tifrunner.gnm1.ann1.70N71I Arachis hypogaea HOM05D004969 ORTHO05D006085 7.4e-91 338.6 357 56.9
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 1.3e-90 337.8 413 51.6
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 1.1e-89 334.7 662 39.7
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 2.6e-88 330.1 404 51.7
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 4.5e-88 329.3 397 51.4
SEGI_27085 Sequoiadendron giganteum HOM05D004969 ORTHO05D006085 7.7e-88 328.6 366 56.3
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 3.8e-87 326.2 312 61.5
AT5G16620 Arabidopsis thaliana HOM05D004969 ORTHO05D006085 5.5e-86 322.4 418 50.0
AL6G27590 Arabidopsis lyrata HOM05D004969 ORTHO05D006085 1.2e-85 321.2 418 50.0
CDE07G1303 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 2.7e-85 320.1 323 57.6
Atru.chr1.1922 Acer truncatum HOM05D004969 ORTHO05D006085 5.2e-84 315.8 345 53.6
MSTRG.1535 Avicennia marina HOM05D004969 ORTHO05D006085 8.8e-84 315.1 380 51.8
Mapoly0007s0079 Marchantia polymorpha HOM05D004969 ORTHO05D006085 2.0e-83 313.9 395 48.4
Aa31LG11G13030 Aethionema arabicum HOM05D004969 ORTHO05D006085 2.2e-82 310.5 424 51.4
Pp3c4_25740 Physcomitrium patens HOM05D004969 ORTHO05D006085 6.3e-82 308.9 375 50.9
CARHR196580 Cardamine hirsuta HOM05D004969 ORTHO05D006085 7.0e-81 305.4 327 54.1
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 2.2e-79 300.4 605 38.2
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 2.2e-79 300.4 605 38.2
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 7.2e-78 295.4 507 42.2
Zm00001eb422870 Zea mays HOM05D004969 ORTHO05D006085 4.7e-77 292.7 382 49.2
Oeu064082.1 Olea europaea HOM05D004969 ORTHO05D006085 8.8e-76 288.5 322 55.3
Pp3c26_4000 Physcomitrium patens HOM05D004969 ORTHO05D006085 3.4e-75 286.6 380 47.6
FAN01G1532 Fragaria x ananassa HOM05D004969 ORTHO05D006085 2.8e-74 283.5 361 52.9
Sabra04G0058000 Salix brachista HOM05D004969 ORTHO05D006085 1.3e-71 274.6 214 69.6
AUR62023559 Chenopodium quinoa HOM05D004969 ORTHO05D006085 2.9e-71 273.5 438 48.2
arahy.Tifrunner.gnm1.ann1.247CUK Arachis hypogaea HOM05D004969 ORTHO05D006085 2.1e-69 267.3 340 50.9
AagrBONN_evm.TU.Sc2ySwM_362.1764 Anthoceros agrestis HOM05D004969 ORTHO05D006085 8.8e-68 261.9 412 43.9
SMO367G0370 Selaginella moellendorffii HOM05D004969 ORTHO05D006085 1.1e-65 255.0 355 53.8
Hund16770 Selenicereus undatus HOM05D004969 ORTHO05D006085 5.5e-62 242.7 200 62.0
TPR.G37348 Trifolium pratense HOM05D004969 ORTHO05D006085 1.8e-57 227.6 329 54.4
CBR_g49427 Chara braunii HOM05D004969 ORTHO05D006085 2.9e-55 220.3 196 60.2
MBI06_g45016_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 3.9e-55 219.9 262 55.3
Gohir.A07G173560 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.0e-52 211.8 119 89.9
HanXRQChr02g0036751 Helianthus annuus HOM05D004969 ORTHO05D006085 2.0e-51 207.6 269 48.0
HanXRQChr02g0036561 Helianthus annuus HOM05D004969 ORTHO05D006085 6.0e-48 196.1 431 37.1
TPR.G14671 Trifolium pratense HOM05D004969 ORTHO05D006085 5.6e-46 189.5 102 89.2
Cre12.g508000 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 1.8e-36 157.9 173 45.1
MD02G1236200 Malus domestica HOM05D005192 ORTHO05D006023 5.2e-36 156.4 125 71.2
Sabra04G0057900 Salix brachista HOM05D004969 ORTHO05D006085 5.4e-33 146.4 199 52.8
FvH4_2g09382 Fragaria vesca HOM05D004969 ORTHO05D006085 1.2e-32 145.2 158 53.8
EL10Ac1g00146 Beta vulgaris HOM05D004969 ORTHO05D006085 8.6e-31 139.0 320 38.4
Hund16636 Selenicereus undatus HOM05D004969 ORTHO05D006085 2.1e-29 134.4 163 52.1
Hund31138 Selenicereus undatus HOM05D004969 ORTHO05D006085 2.8e-29 134.0 159 53.5
CDE07G1829 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 3.1e-28 130.6 67 95.5
THA.LOC104802935 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 3.1e-28 130.6 281 46.3
MCO11G221 Micromonas commoda HOM05D004969 ORTHO05D006085 6.8e-28 129.4 149 42.3
FAN15G1524 Fragaria x ananassa HOM05D004969 ORTHO05D006085 5.4e-25 119.8 74 83.8
MELO3C025953.2 Cucumis melo HOM05D004969 ORTHO05D006085 3.3e-22 110.5 64 84.4
Oeu000537.1 Olea europaea HOM05D004969 ORTHO05D006085 1.3e-21 108.6 69 82.6
AUR62004590 Chenopodium quinoa HOM05D004969 ORTHO05D006085 1.2e-19 102.1 209 39.7
FvH4_2g09383 Fragaria vesca HOM05D004969 ORTHO05D006085 1.0e-15 89.0 47 89.4
Hund14746 Selenicereus undatus HOM05D004969 ORTHO05D006085 9.6e-14 82.4 51 72.5
Gohir.A07G173840 Gossypium hirsutum HOM05D004969 ORTHO05D006085 3.1e-12 77.4 150 37.3
HPP92_017745 Vanilla planifolia HOM05D004969 ORTHO05D006085 3.4e-11 73.9 102 44.1
SHI30104 Sapria himalayana HOM05D007291 ORTHO05D009038 4.5e-11 73.6 65 52.3
Haze_10772 Corylus avellana HOM05D004969 ORTHO05D006085 1.3e-10 72.0 68 64.7
CARHR196590 Cardamine hirsuta HOM05D004969 ORTHO05D006085 1.1e-09 68.9 112 46.4
Cre12.g490650 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 9.3e-09 65.9 158 27.8
MELO3C033346.2 Cucumis melo HOM05D004969 ORTHO05D044988 2.7e-08 64.3 52 65.4


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