Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 7.6e-43 176.8 91 100.0
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 2.1e-40 168.7 91 92.3
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 3.9e-39 164.5 91 89.0
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 5.1e-39 164.1 91 89.0
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 4.3e-38 161.0 91 90.1
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 7.4e-38 160.2 89 89.9
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 7.4e-38 160.2 91 89.0
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 1.3e-37 159.5 89 89.9
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 2.1e-37 158.7 91 87.9
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 3.7e-37 157.9 91 86.8
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 4.8e-37 157.5 91 89.0
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 6.2e-37 157.1 91 85.7
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 6.2e-37 157.1 91 85.7
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 8.1e-37 156.8 91 87.9
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 1.1e-36 156.4 91 87.9
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 1.1e-36 156.4 91 87.9
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 2.4e-36 155.2 91 85.7
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 2.4e-36 155.2 91 86.8
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 2.4e-36 155.2 89 85.4
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 5.3e-36 154.1 89 86.5
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 6.9e-36 153.7 89 87.6
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 6.9e-36 153.7 91 82.4
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 6.9e-36 153.7 91 84.6
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 9.0e-36 153.3 91 83.5
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 9.0e-36 153.3 90 85.6
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 9.0e-36 153.3 90 85.6
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 1.2e-35 152.9 91 86.8
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 1.2e-35 152.9 85 89.4
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 1.2e-35 152.9 85 89.4
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 1.5e-35 152.5 91 85.7
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 1.5e-35 152.5 91 83.5
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 3.4e-35 151.4 88 84.1
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 5.8e-35 150.6 90 83.3
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 9.9e-35 149.8 91 82.4
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 1.7e-34 149.1 90 82.2
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 1.7e-34 149.1 90 82.2
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 2.2e-34 148.7 91 80.2
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 2.2e-34 148.7 91 82.4
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 2.2e-34 148.7 91 82.4
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 2.2e-34 148.7 91 82.4
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 2.9e-34 148.3 91 81.3
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 3.8e-34 147.9 91 83.5
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 3.8e-34 147.9 91 82.4
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 4.9e-34 147.5 91 81.3
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 4.9e-34 147.5 91 78.0
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 1.1e-33 146.4 91 82.4
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 1.1e-33 146.4 88 83.0
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 1.9e-33 145.6 91 78.0
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 2.4e-33 145.2 91 80.2
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 2.4e-33 145.2 88 79.5
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 5.5e-33 144.1 86 83.7
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 5.5e-33 144.1 91 81.3
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 9.3e-33 143.3 91 78.0
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 1.6e-32 142.5 90 80.0
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 2.1e-32 142.1 89 77.5
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 1.0e-31 139.8 86 79.1
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 5.1e-31 137.5 89 77.5
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 6.7e-31 137.1 90 78.9
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 6.7e-31 137.1 90 78.9
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 6.7e-31 137.1 86 76.7
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 8.7e-31 136.7 90 77.8
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 8.7e-31 136.7 82 84.1
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 3.3e-30 134.8 86 77.9
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 4.3e-30 134.4 89 76.4
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 5.6e-30 134.0 86 77.9
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 5.6e-30 134.0 86 77.9
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 7.4e-30 133.7 86 76.7
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 2.1e-29 132.1 86 77.9
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 2.8e-29 131.7 86 75.6
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 3.7e-29 131.3 90 73.3
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 6.2e-29 130.6 82 81.7
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 1.1e-28 129.8 85 75.3
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.4e-28 129.4 89 70.8
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 1.4e-28 129.4 86 73.3
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 1.8e-28 129.0 82 78.0
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 2.4e-28 128.6 89 76.4
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 2.4e-28 128.6 83 79.5
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 2.4e-28 128.6 87 72.4
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 3.1e-28 128.3 89 75.3
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 4.0e-28 127.9 83 78.3
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 6.9e-28 127.1 81 77.8
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.2e-27 126.3 83 77.1
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 2.0e-27 125.6 73 84.9
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 2.0e-27 125.6 88 69.3
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 4.5e-27 124.4 83 75.9
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 5.8e-27 124.0 85 71.8
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.3e-26 122.9 83 75.9
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 2.2e-26 122.1 85 71.8
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 8.4e-26 120.2 85 70.6
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 5.5e-25 117.5 71 80.3
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 7.1e-25 117.1 85 69.4
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 9.3e-25 116.7 89 70.8
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 2.5e-22 108.6 84 63.1
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 2.5e-22 108.6 84 63.1
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 3.3e-22 108.2 79 69.6
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 5.7e-22 107.5 91 63.7
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 7.4e-22 107.1 84 61.9
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 8.2e-21 103.6 82 61.0
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 1.1e-20 103.2 82 61.0
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 1.1e-20 103.2 86 59.3
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 1.1e-20 103.2 65 78.5
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 1.4e-20 102.8 82 59.8
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 2.4e-20 102.1 82 59.8
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 2.4e-20 102.1 82 59.8
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 2.4e-20 102.1 82 59.8
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 2.4e-20 102.1 82 59.8
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 2.4e-20 102.1 87 58.6
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 4.1e-20 101.3 60 83.3
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 9.0e-20 100.1 82 58.5
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 1.5e-19 99.4 82 58.5
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 1.5e-19 99.4 82 58.5
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 2.5e-17 92.0 51 88.2
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 3.0e-15 85.1 60 71.7
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 5.1e-15 84.3 89 51.7
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 8.8e-15 83.6 87 56.3
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 1.1e-14 83.2 68 61.8
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 7.4e-14 80.5 82 51.2
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 1.3e-13 79.7 49 79.6
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.7e-13 79.3 60 66.7
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 1.7e-13 79.3 60 68.3
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 1.4e-12 76.3 83 51.8
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 1.8e-12 75.9 70 61.4
PSO017G6472 Papaver somniferum HOM05D006477 ORTHO05D008311 3.8e-10 68.2 48 68.8
PSO017G6604 Papaver somniferum HOM05D006477 ORTHO05D008311 3.8e-10 68.2 48 68.8


User provided reference genes

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