Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 6.0e-129 464.2 230 100.0
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 1.1e-119 433.3 221 96.4
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 1.1e-109 400.2 221 87.3
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 5.9e-108 394.4 221 86.9
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 7.9e-105 384.0 221 83.3
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 1.2e-100 370.2 217 83.4
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 2.6e-100 369.0 217 80.6
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 7.7e-100 367.5 217 82.0
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 3.8e-99 365.2 221 81.0
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 6.5e-99 364.4 217 80.2
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 1.1e-98 363.6 217 81.6
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 1.1e-98 363.6 218 81.2
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.1e-98 363.6 219 80.8
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.2e-98 361.7 232 77.6
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 9.4e-98 360.5 217 81.1
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 1.2e-97 360.1 215 81.9
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 2.1e-97 359.4 215 81.4
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 2.7e-97 359.0 221 79.2
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 2.7e-97 359.0 217 81.6
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 7.9e-97 357.5 217 79.7
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 7.9e-97 357.5 217 80.2
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 1.0e-96 357.1 217 80.2
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 1.4e-96 356.7 217 80.6
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 2.3e-96 355.9 219 79.9
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 2.3e-96 355.9 217 78.8
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 3.9e-96 355.1 217 77.4
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 3.9e-96 355.1 217 79.3
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 3.9e-96 355.1 217 78.3
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 8.8e-96 354.0 221 77.8
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 8.8e-96 354.0 217 79.3
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 1.5e-95 353.2 221 76.9
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 2.0e-95 352.8 221 77.8
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 2.0e-95 352.8 217 78.3
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 2.6e-95 352.4 217 78.3
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 3.3e-95 352.1 221 77.4
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 5.7e-95 351.3 217 78.8
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 7.4e-95 350.9 219 77.6
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 1.7e-94 349.7 221 76.9
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 2.8e-94 349.0 219 77.2
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 3.7e-94 348.6 217 76.5
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 3.7e-94 348.6 217 77.9
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 6.3e-94 347.8 221 78.7
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 3.1e-93 345.5 219 76.7
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 5.3e-93 344.7 221 76.5
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 7.0e-93 344.4 217 77.0
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 7.0e-93 344.4 221 74.7
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 9.1e-93 344.0 221 76.9
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.2e-92 343.6 219 76.3
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 3.5e-92 342.0 221 73.8
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 4.5e-92 341.7 221 75.6
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 4.5e-92 341.7 221 75.1
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 5.9e-92 341.3 225 75.1
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 7.7e-92 340.9 221 74.2
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 7.7e-92 340.9 220 76.8
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 1.3e-91 340.1 219 74.9
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 2.2e-91 339.3 229 75.5
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 3.8e-91 338.6 221 74.2
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 3.8e-91 338.6 261 66.3
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 5.0e-91 338.2 239 71.1
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 6.5e-91 337.8 219 74.4
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 8.5e-91 337.4 215 74.9
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 1.1e-90 337.0 221 74.2
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 1.4e-90 336.7 219 75.3
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 1.4e-90 336.7 217 74.7
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 1.9e-90 336.3 222 73.4
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 3.2e-90 335.5 219 74.0
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 5.5e-90 334.7 221 72.9
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 1.2e-89 333.6 218 73.9
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 1.6e-89 333.2 217 75.6
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.1e-89 331.3 215 77.2
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 6.1e-89 331.3 217 73.7
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.4e-88 330.1 217 72.4
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 1.8e-88 329.7 217 71.9
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.8e-88 329.7 224 71.0
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 3.0e-88 328.9 219 73.5
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 5.2e-88 328.2 217 74.2
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 8.8e-88 327.4 271 63.8
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.5e-87 326.6 206 78.6
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 2.0e-87 326.2 217 71.9
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 2.2e-86 322.8 221 73.3
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 2.8e-86 322.4 217 70.5
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 1.8e-85 319.7 199 76.9
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.0e-83 313.9 240 68.3
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 2.9e-83 312.4 217 71.9
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.6e-81 306.6 217 70.5
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 6.1e-81 304.7 219 67.6
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 1.4e-80 303.5 218 63.8
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 4.4e-79 298.5 201 72.1
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 1.7e-78 296.6 221 63.8
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 1.4e-77 293.5 221 63.3
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 2.4e-77 292.7 220 62.7
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 1.1e-74 283.9 224 66.1
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 4.2e-74 282.0 187 72.7
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 2.7e-73 279.3 185 72.4
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 9.8e-63 244.2 201 65.2
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 2.9e-59 232.6 323 42.1
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.6e-57 226.9 142 76.8
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 2.0e-55 219.9 197 60.9
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.7e-54 216.9 144 74.3
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 3.3e-50 202.6 130 73.1
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.4e-47 192.2 110 86.4
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 9.9e-39 164.5 97 80.4
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 3.5e-36 156.0 91 83.5
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 3.0e-35 152.9 88 80.7
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.1e-33 146.7 90 81.1
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.1e-33 146.7 90 81.1
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 2.4e-32 143.3 91 76.9
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 1.9e-29 133.7 83 78.3
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 7.8e-28 128.3 75 77.3
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 2.1e-25 120.2 80 70.0
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 2.8e-17 93.2 74 67.6
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 1.1e-13 81.3 106 48.1
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.2e-13 79.7 57 71.9
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.9e-10 70.5 63 60.3
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 1.3e-09 67.8 41 73.2
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.8e-09 66.6 51 58.8
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 3.7e-09 66.2 34 79.4
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 1.4e-08 64.3 81 44.4
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 1.2e-07 61.2 45 71.1
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.5e-07 60.8 34 76.5


User provided reference genes

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