Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 2.6e-200 701.8 343 100.0
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 4.0e-161 571.6 337 84.3
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 7.5e-152 540.8 332 81.9
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 2.1e-146 522.7 340 76.8
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 1.0e-140 503.8 351 72.6
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 2.4e-137 492.7 340 73.8
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 2.0e-136 489.6 351 70.4
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 4.9e-135 485.0 332 73.5
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 1.4e-134 483.4 346 70.5
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 5.4e-134 481.5 317 74.4
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 1.2e-133 480.3 329 75.1
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 1.7e-132 476.5 349 69.9
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 3.0e-132 475.7 315 74.3
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 8.7e-132 474.2 321 74.5
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 1.1e-131 473.8 329 71.7
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 3.3e-131 472.2 314 72.6
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 3.3e-131 472.2 357 69.5
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 7.3e-131 471.1 314 72.6
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 9.6e-131 470.7 312 75.0
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 6.2e-130 468.0 320 74.1
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 8.1e-130 467.6 320 73.8
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.8e-129 466.5 314 72.0
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 4.0e-129 465.3 337 69.1
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 5.3e-129 464.9 323 71.8
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 5.3e-129 464.9 291 78.7
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 5.3e-129 464.9 337 70.6
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 9.0e-129 464.2 347 69.5
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 2.6e-128 462.6 315 73.0
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.4e-128 462.2 358 67.3
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 5.8e-128 461.5 336 69.9
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 7.6e-128 461.1 291 77.3
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 6.4e-127 458.0 327 71.6
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 2.4e-126 456.1 292 77.4
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 2.4e-126 456.1 293 75.4
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 4.2e-126 455.3 330 70.0
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 7.1e-126 454.5 354 66.4
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 7.1e-126 454.5 316 71.2
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 1.6e-125 453.4 303 74.6
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 2.1e-125 453.0 290 77.9
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 3.5e-125 452.2 310 75.2
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 3.9e-124 448.7 295 73.9
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 3.9e-124 448.7 290 74.1
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 1.1e-123 447.2 318 69.8
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 1.5e-123 446.8 304 72.7
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 2.5e-123 446.0 324 69.1
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 2.5e-123 446.0 320 70.0
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 2.1e-122 443.0 294 74.5
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 2.1e-122 443.0 290 74.5
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 6.2e-122 441.4 344 67.4
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 8.1e-122 441.0 274 79.2
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.4e-121 440.3 339 67.3
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 1.8e-121 439.9 330 67.6
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 3.1e-121 439.1 298 74.8
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 9.0e-121 437.6 417 58.5
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 9.0e-121 437.6 320 68.8
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 1.2e-120 437.2 292 73.3
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 2.0e-120 436.4 318 69.2
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 2.0e-120 436.4 293 72.4
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 5.8e-120 434.9 296 72.6
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 2.2e-119 433.0 336 65.2
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 2.9e-119 432.6 293 71.0
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 3.8e-119 432.2 221 96.4
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 4.9e-119 431.8 301 69.8
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 1.9e-118 429.9 314 68.2
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 3.2e-118 429.1 341 64.5
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 9.3e-118 427.6 323 70.9
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.6e-117 426.8 296 71.3
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 2.7e-117 426.0 296 69.6
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 3.5e-117 425.6 292 69.5
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 3.5e-117 425.6 291 71.8
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.3e-116 422.9 331 68.3
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 3.9e-116 422.2 272 75.0
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 3.9e-116 422.2 331 64.4
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 6.7e-116 421.4 344 66.9
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 8.7e-116 421.0 274 75.9
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 1.1e-115 420.6 292 70.9
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.5e-115 420.2 296 70.3
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 4.3e-115 418.7 276 74.6
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 6.2e-114 414.8 292 70.5
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 1.4e-113 413.7 318 66.7
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 9.0e-113 411.0 305 68.5
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 2.0e-112 409.8 341 64.5
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.3e-111 407.1 348 64.9
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.3e-106 390.6 276 72.8
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 3.7e-106 389.0 297 67.3
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 4.8e-106 388.7 280 69.6
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 3.4e-104 382.5 271 70.8
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 5.5e-102 375.2 267 68.9
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 2.0e-99 366.7 290 61.7
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 1.3e-98 364.0 309 60.5
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 2.6e-96 356.3 264 63.6
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 5.9e-96 355.1 289 60.6
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 1.0e-92 344.4 294 60.2
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 6.3e-90 335.1 301 62.5
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 9.1e-81 304.7 206 71.4
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 1.5e-78 297.4 391 43.0
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.0e-76 291.2 209 68.9
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 7.7e-64 248.4 161 75.2
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 3.3e-62 243.0 169 72.2
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 4.2e-62 242.7 260 54.2
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.8e-58 229.9 301 48.8
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 1.4e-57 227.6 202 61.9
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 9.5e-54 214.9 143 73.4
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 1.2e-53 214.5 192 60.9
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.7e-50 203.0 230 53.9
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.1e-49 199.5 230 53.0
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 3.1e-44 183.3 107 78.5
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 5.4e-41 172.6 107 77.6
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 2.9e-34 150.2 90 81.1
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.9e-30 137.5 89 71.9
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 8.1e-29 132.1 83 78.3
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.2e-24 118.2 66 78.8
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 8.1e-21 105.5 129 46.5
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 4.2e-17 93.2 74 66.2
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 3.5e-16 90.1 74 66.2
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 6.2e-13 79.3 106 48.1
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.3e-12 76.3 57 70.2
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 2.9e-10 70.5 45 75.6
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 1.9e-09 67.8 41 73.2
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 2.1e-08 64.3 81 44.4
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 1.5e-06 58.2 45 68.9


User provided reference genes

Program Settings