Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G069500 Prunus persica HOM05D000003 ORTHO05D010102 1.8e-90 335.9 168 100.0
Atru.chr3.1005 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-11 73.6 210 30.0
RcHm_v2.0_Chr7g0187741 Rosa chinensis HOM05D008097 ORTHO05D010102 2.9e-11 72.8 215 28.4
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 6.4e-11 71.6 207 24.2
Atru.chr9.909 Acer truncatum HOM05D000003 ORTHO05D000004 8.3e-11 71.2 210 28.1
Atru.chr8.782 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-10 70.9 210 28.1
RcHm_v2.0_Chr1g0354891 Rosa chinensis HOM05D008097 ORTHO05D010102 1.1e-10 70.9 215 27.9
Atru.chr3.1768 Acer truncatum HOM05D000003 ORTHO05D000167 1.4e-10 70.5 199 30.2
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 3.2e-10 69.3 210 28.6
Atru.chr7.293 Acer truncatum HOM05D000003 ORTHO05D000167 3.2e-10 69.3 187 26.7
CANSAT35G0981 Cannabis sativa HOM05D000003 ORTHO05D000167 3.2e-10 69.3 201 26.4
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 4.1e-10 68.9 207 30.0
Prupe.7G038400 Prunus persica HOM05D000003 ORTHO05D010102 5.4e-10 68.6 128 35.9
Atru.chr4.2041 Acer truncatum HOM05D000003 ORTHO05D000167 7.0e-10 68.2 221 29.0
CANSAT35G0293 Cannabis sativa HOM05D000003 ORTHO05D000004 7.0e-10 68.2 212 25.5
Prupe.7G035500 Prunus persica HOM05D000003 ORTHO05D011650 7.0e-10 68.2 150 34.0
FvH4_2g20801 Fragaria vesca HOM05D008097 ORTHO05D000167 9.2e-10 67.8 210 29.5
RcHm_v2.0_Chr4g0398671 Rosa chinensis HOM05D000003 ORTHO05D010102 1.2e-09 67.4 219 27.4
Prupe.8G101300 Prunus persica HOM05D008097 ORTHO05D010102 2.7e-09 66.2 107 36.4
FAN25G3685 Fragaria x ananassa HOM05D008097 ORTHO05D010102 3.5e-09 65.9 211 27.0
CANSAT01G2509 Cannabis sativa HOM05D000003 ORTHO05D000004 4.6e-09 65.5 212 24.1
FAN02G0134 Fragaria x ananassa HOM05D008097 ORTHO05D010102 7.8e-09 64.7 211 27.5
Atru.chr8.1648 Acer truncatum HOM05D000003 ORTHO05D000167 1.0e-08 64.3 210 27.1
CANSAT80G0814 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-08 63.5 208 26.9
Atru.chr13.2526 Acer truncatum HOM05D000003 ORTHO05D000167 3.0e-08 62.8 174 29.9
Atru.chr2.2033 Acer truncatum HOM05D000003 ORTHO05D000167 3.0e-08 62.8 140 28.6
CANSAT01G2496 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-08 62.8 209 26.3
CANSAT56G0342 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-08 62.8 228 22.8
FvH4_4g20982 Fragaria vesca HOM05D000003 ORTHO05D006737 3.0e-08 62.8 212 25.5
QL05p051227 Quercus lobata HOM05D000003 ORTHO05D000004 3.0e-08 62.8 205 26.3
Atru.chr5.2661 Acer truncatum HOM05D000003 ORTHO05D000167 3.9e-08 62.4 196 26.5
CANSAT21G0988 Cannabis sativa HOM05D000003 ORTHO05D000004 5.0e-08 62.0 212 24.1
Prupe.3G126800 Prunus persica HOM05D008097 ORTHO05D010102 6.6e-08 61.6 77 45.5
Atru.chr1.3779 Acer truncatum HOM05D000003 ORTHO05D000167 8.6e-08 61.2 212 24.5
Atru.chr2.2135 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-08 61.2 198 25.3
Atru.chr8.1143 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-08 61.2 204 27.5
FvH4_3g20371 Fragaria vesca HOM05D000003 ORTHO05D000004 1.1e-07 60.8 212 25.5
RcHm_v2.0_Chr1g0344421 Rosa chinensis HOM05D000003 ORTHO05D006737 1.1e-07 60.8 209 26.8
Atru.chr11.167 Acer truncatum HOM05D000003 ORTHO05D000006 1.5e-07 60.5 206 25.7
CANSAT54G2929 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-07 60.5 216 27.8
CANSAT78G2307 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-07 60.5 225 27.1
FAN25G2016 Fragaria x ananassa HOM05D008097 ORTHO05D010102 1.9e-07 60.1 215 26.0
Atru.chr11.887 Acer truncatum HOM05D000003 ORTHO05D000167 2.5e-07 59.7 222 27.9
Atru.chr3.2393 Acer truncatum HOM05D000003 ORTHO05D000022 2.5e-07 59.7 215 26.5
Atru.chr4.85 Acer truncatum HOM05D000003 ORTHO05D000167 3.3e-07 59.3 207 27.1
Atru.chr6.1288 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-07 59.3 171 28.7
RcHm_v2.0_Chr7g0182091 Rosa chinensis HOM05D000003 ORTHO05D000004 3.3e-07 59.3 203 26.6
Atru.chr10.8 Acer truncatum HOM05D000003 ORTHO05D000167 4.3e-07 58.9 200 26.0
Atru.chr4.1214 Acer truncatum HOM05D000003 ORTHO05D000167 4.3e-07 58.9 212 24.5
TWI09G0364 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 4.3e-07 58.9 205 24.9
Atru.chr11.145 Acer truncatum HOM05D000003 ORTHO05D000167 5.6e-07 58.5 180 30.0
Atru.chr11.542 Acer truncatum HOM05D000003 ORTHO05D000167 5.6e-07 58.5 204 24.5
Atru.chr7.1503 Acer truncatum HOM05D000003 ORTHO05D000006 5.6e-07 58.5 207 25.1
Atru.chr1.763 Acer truncatum HOM05D000003 ORTHO05D000004 7.3e-07 58.2 201 25.9
Atru.chr10.362 Acer truncatum HOM05D000003 ORTHO05D000167 9.5e-07 57.8 211 26.1
Atru.chr2.2201 Acer truncatum HOM05D000003 ORTHO05D000004 9.5e-07 57.8 202 25.2
Atru.chr2.2733 Acer truncatum HOM05D000003 ORTHO05D000167 9.5e-07 57.8 200 23.5
Atru.chr7.396 Acer truncatum HOM05D000003 ORTHO05D000167 9.5e-07 57.8 197 25.9
Atru.chr9.146 Acer truncatum HOM05D000003 ORTHO05D000167 9.5e-07 57.8 213 25.8
CANSAT35G1604 Cannabis sativa HOM05D000003 ORTHO05D000004 9.5e-07 57.8 219 25.1
CANSAT78G0786 Cannabis sativa HOM05D000003 ORTHO05D000004 9.5e-07 57.8 217 26.7
CANSAT80G2517 Cannabis sativa HOM05D000003 ORTHO05D000167 9.5e-07 57.8 200 23.5
Prupe.6G141500 Prunus persica HOM05D000003 ORTHO05D000167 9.5e-07 57.8 209 25.8
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 9.5e-07 57.8 208 23.6
CANSAT64G2222 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-06 57.4 209 24.4
CANSAT78G1893 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-06 57.4 149 29.5
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 1.2e-06 57.4 147 25.9
CANSAT54G1529 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-06 57.0 171 25.7
CANSAT64G1247 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-06 57.0 166 27.1
QL07p038559 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-06 57.0 200 25.5
QL10p056321 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-06 57.0 208 25.5
Atru.chr12.1232 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-06 56.6 204 23.5
Atru.chr2.2490 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-06 56.6 201 26.4
Atru.chr8.183 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-06 56.6 203 25.1
Atru.chr8.265 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-06 56.6 203 25.1
CANSAT64G2725 Cannabis sativa HOM05D000003 ORTHO05D024751 2.1e-06 56.6 190 25.3
Gorai.003G154500 Gossypium raimondii HOM05D012953 ORTHO05D013581 2.1e-06 56.6 132 28.0
QL10p011272 Quercus lobata HOM05D000003 ORTHO05D000167 2.1e-06 56.6 197 25.9
RcHm_v2.0_Chr4g0432871 Rosa chinensis HOM05D000003 ORTHO05D015270 2.1e-06 56.6 167 27.5
Sed0017730 Sechium edule HOM05D000003 ORTHO05D000004 2.1e-06 56.6 220 26.8
Atru.chr8.838 Acer truncatum HOM05D000003 ORTHO05D000167 2.8e-06 56.2 198 27.8
Atru.chr12.2338 Acer truncatum HOM05D000003 ORTHO05D000167 3.6e-06 55.8 167 30.5
Atru.chr6.748 Acer truncatum HOM05D000003 ORTHO05D000004 3.6e-06 55.8 202 23.3
Manes.07G069794 Manihot esculenta HOM05D000003 ORTHO05D000167 3.6e-06 55.8 211 24.2
CANSAT21G2622 Cannabis sativa HOM05D000003 ORTHO05D000004 4.7e-06 55.5 220 27.7
CANSAT80G2437 Cannabis sativa HOM05D000003 ORTHO05D000167 4.7e-06 55.5 197 26.4
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 4.7e-06 55.5 200 25.0
CANSAT25G2503 Cannabis sativa HOM05D000003 ORTHO05D000004 6.2e-06 55.1 131 26.7
CANSAT35G1830 Cannabis sativa HOM05D000003 ORTHO05D000167 6.2e-06 55.1 206 27.2
PSO210G1737 Papaver somniferum HOM05D000003 ORTHO05D000022 6.2e-06 55.1 91 30.8
Atru.chr1.3769 Acer truncatum HOM05D000003 ORTHO05D000167 8.0e-06 54.7 149 31.5
Atru.chr10.1148 Acer truncatum HOM05D000003 ORTHO05D000167 8.0e-06 54.7 156 28.2
CANSAT11G0329 Cannabis sativa HOM05D000003 ORTHO05D000004 8.0e-06 54.7 204 26.0
CANSAT37G0018 Cannabis sativa HOM05D000003 ORTHO05D000167 8.0e-06 54.7 208 26.9
CANSAT56G3747 Cannabis sativa HOM05D000003 ORTHO05D000167 8.0e-06 54.7 85 32.9
FvH4_4g31671 Fragaria vesca HOM05D008097 ORTHO05D010102 8.0e-06 54.7 156 29.5


User provided reference genes

Program Settings