Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G066800 Prunus persica HOM05D000929 ORTHO05D336169 6.7e-63 243.8 121 100.0
Prupe.2G018400 Prunus persica HOM05D000929 ORTHO05D004813 1.2e-11 73.6 61 70.5
Prupe.2G055800 Prunus persica HOM05D000929 ORTHO05D004813 1.2e-11 73.6 61 70.5
Prupe.2G056200 Prunus persica HOM05D000929 ORTHO05D004813 1.6e-11 73.2 54 75.9
MD07G1052000 Malus domestica HOM05D000929 ORTHO05D004813 1.3e-10 70.1 61 68.9
RcHm_v2.0_Chr7g0215311 Rosa chinensis HOM05D000929 ORTHO05D004813 3.9e-10 68.6 61 67.2
Prupe.2G068200 Prunus persica HOM05D000929 ORTHO05D004813 6.6e-10 67.8 62 67.7
FvH4_5g19200 Fragaria vesca HOM05D000929 ORTHO05D004813 8.6e-10 67.4 88 52.3
FAN04G0569 Fragaria x ananassa HOM05D000929 ORTHO05D004813 1.1e-09 67.0 61 65.6
FvH4_5g25110 Fragaria vesca HOM05D000929 ORTHO05D004813 1.5e-09 66.6 61 65.6
FAN18G2918 Fragaria x ananassa HOM05D000929 ORTHO05D004813 1.5e-09 66.6 61 65.6
FAN08G3498 Fragaria x ananassa HOM05D000929 ORTHO05D004813 4.3e-09 65.1 61 63.9
QL12p003602 Quercus lobata HOM05D000929 ORTHO05D004813 5.6e-09 64.7 61 59.0
QL93p0143_0032 Quercus lobata HOM05D000929 ORTHO05D004813 5.6e-09 64.7 61 59.0
MD02G1267100 Malus domestica HOM05D000929 ORTHO05D004813 9.5e-09 63.9 61 65.6
Actinidia32793 Actinidia chinensis HOM05D000929 ORTHO05D004813 1.6e-08 63.2 63 60.3
Actinidia01247 Actinidia chinensis HOM05D000929 ORTHO05D004813 2.1e-08 62.8 63 58.7
DCAR_004536 Daucus carota HOM05D000929 ORTHO05D004813 2.8e-08 62.4 73 54.8
Manes.17G001200 Manihot esculenta HOM05D000929 ORTHO05D004813 2.8e-08 62.4 91 45.1
FAN13G0018 Fragaria x ananassa HOM05D000929 ORTHO05D004813 3.6e-08 62.0 61 62.3
Dinv37432 Davidia involucrata HOM05D000929 ORTHO05D004813 6.2e-08 61.2 55 63.6
Lj8C361G1 Lonicera japonica HOM05D000929 ORTHO05D004813 6.2e-08 61.2 97 43.3
TWI60G0350 Tripterygium wilfordii HOM05D000929 ORTHO05D004813 8.1e-08 60.8 64 56.2
Cfa012306 Carpinus fangiana HOM05D000929 ORTHO05D004813 1.1e-07 60.5 61 57.4
EL10Ac5g12482 Beta vulgaris HOM05D000929 ORTHO05D004813 4.0e-07 58.5 52 65.4
Haze_08424 Corylus avellana HOM05D000929 ORTHO05D004813 4.0e-07 58.5 61 57.4
Hund14936 Selenicereus undatus HOM05D000929 ORTHO05D004813 5.2e-07 58.2 52 65.4
Dinv41800 Davidia involucrata HOM05D000929 ORTHO05D004813 6.8e-07 57.8 60 58.3
Eucgr.E01151 Eucalyptus grandis HOM05D000929 ORTHO05D004813 6.8e-07 57.8 52 59.6
Potri.004G235200 Populus trichocarpa HOM05D000929 ORTHO05D004813 6.8e-07 57.8 100 41.0
Rhsim11G0037600 Rhododendron simsii HOM05D000929 ORTHO05D004813 6.8e-07 57.8 55 60.0
GSVIVG01036887001 Vitis vinifera HOM05D000929 ORTHO05D004813 6.8e-07 57.8 52 63.5
TWI32G0464 Tripterygium wilfordii HOM05D000929 ORTHO05D004813 8.9e-07 57.4 64 54.7
TAR362G0882 Trochodendron aralioides HOM05D000929 ORTHO05D004813 1.2e-06 57.0 64 51.6
CiPaw.12G055500 Carya illinoinensis HOM05D000929 ORTHO05D004813 2.0e-06 56.2 55 58.2
vmacro00098 Vaccinium macrocarpon HOM05D000929 ORTHO05D004813 2.0e-06 56.2 63 54.0
TPR.G14264 Trifolium pratense HOM05D000929 ORTHO05D004813 4.4e-06 55.1 98 37.8
SalBow4G0955 Salvia bowleyana HOM05D000929 ORTHO05D004813 7.6e-06 54.3 55 56.4
AUR62030759 Chenopodium quinoa HOM05D000929 ORTHO05D004813 9.9e-06 53.9 52 59.6
Sabra01G0179900 Salix brachista HOM05D000929 ORTHO05D004813 9.9e-06 53.9 100 38.0


User provided reference genes

Program Settings