Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G063700 Prunus persica HOM05D017852 ORTHO05D012232 7.1e-101 370.5 180 100.0
Prupe.5G238300 Prunus persica HOM05D004096 ORTHO05D000898 2.6e-79 298.9 178 79.8
Prupe.7G017400 Prunus persica HOM05D004096 ORTHO05D000898 1.7e-57 226.5 109 96.3
FAN05G1903 Fragaria x ananassa HOM05D017852 ORTHO05D010823 8.3e-25 117.9 137 40.1
FAN27G2266 Fragaria x ananassa HOM05D017852 ORTHO05D010823 1.2e-23 114.0 135 39.3
FvH4_7g31231 Fragaria vesca HOM05D017852 ORTHO05D010823 3.5e-23 112.5 135 38.5
FvH4_6g28332 Fragaria vesca HOM05D017852 ORTHO05D010823 1.3e-22 110.5 135 38.5
FAN12G1875 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.6e-20 102.4 140 35.7
FAN06G3212 Fragaria x ananassa HOM05D004096 ORTHO05D010823 3.0e-19 99.4 140 35.0
FAN13G0792 Fragaria x ananassa HOM05D017852 ORTHO05D000898 6.8e-19 98.2 134 35.8
RcHm_v2.0_Chr1g0366901 Rosa chinensis HOM05D004096 ORTHO05D010823 1.4e-16 90.5 140 33.6
Potri.017G018801 Populus trichocarpa HOM05D000455 ORTHO05D050471 1.6e-15 87.0 142 31.7
Sabra17G0002200 Salix brachista HOM05D000063 ORTHO05D050471 1.3e-14 84.0 142 32.4
Potri.017G019466 Populus trichocarpa HOM05D000030 ORTHO05D000009 6.6e-14 81.6 148 28.4
Dinv17345 Davidia involucrata HOM05D008396 ORTHO05D000898 8.6e-14 81.3 155 31.0
Sabra17G0002000 Salix brachista HOM05D008396 ORTHO05D018844 1.5e-13 80.5 148 27.7
Sabra17G0014800 Salix brachista HOM05D008396 ORTHO05D009908 1.5e-13 80.5 148 27.7
FvH4_4g16060 Fragaria vesca HOM05D009478 ORTHO05D010213 4.3e-13 79.0 172 27.9
CANSAT35G0260 Cannabis sativa HOM05D019351 ORTHO05D018844 1.6e-12 77.0 145 34.5
CANSAT56G2158 Cannabis sativa HOM05D009769 ORTHO05D010823 1.6e-12 77.0 129 30.2
Dinv09269 Davidia involucrata HOM05D008396 ORTHO05D000898 1.6e-12 77.0 152 30.3
FvH4_2g09470 Fragaria vesca HOM05D004096 ORTHO05D010213 1.6e-12 77.0 148 29.7
FAN17G0441 Fragaria x ananassa HOM05D004096 ORTHO05D010213 3.6e-12 75.9 148 28.4
FvH4_2g25151 Fragaria vesca HOM05D004096 ORTHO05D010213 4.7e-12 75.5 151 27.2
FvH4_3g37244 Fragaria vesca HOM05D004096 ORTHO05D010213 8.0e-12 74.7 148 29.1
FAN09G2456 Fragaria x ananassa HOM05D004096 ORTHO05D010213 1.1e-11 74.3 145 29.0
FvH4_4g05321 Fragaria vesca HOM05D004096 ORTHO05D000898 1.4e-11 73.9 135 31.1
FAN03G1232 Fragaria x ananassa HOM05D004096 ORTHO05D010213 1.8e-11 73.6 136 30.9
Dinv07236 Davidia involucrata HOM05D008396 ORTHO05D000898 1.5e-10 70.5 162 27.8
FvH4_6g40321 Fragaria vesca HOM05D004096 ORTHO05D010213 1.5e-10 70.5 133 26.3
FAN02G1861 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.4e-10 69.3 119 38.7
FAN05G3432 Fragaria x ananassa HOM05D010142 ORTHO05D012232 3.4e-10 69.3 119 38.7
FAN25G3308 Fragaria x ananassa HOM05D010142 ORTHO05D012232 3.4e-10 69.3 119 38.7
RcHm_v2.0_Chr3g0451001 Rosa chinensis HOM05D009478 ORTHO05D010213 5.8e-10 68.6 146 29.5
FAN16G0995 Fragaria x ananassa HOM05D010969 ORTHO05D015656 7.5e-10 68.2 145 31.0
Dinv24489 Davidia involucrata HOM05D008396 ORTHO05D000898 9.8e-10 67.8 161 31.7
FAN13G2842 Fragaria x ananassa HOM05D009478 ORTHO05D010213 9.8e-10 67.8 147 29.9
FAN26G1477 Fragaria x ananassa HOM05D004096 ORTHO05D010213 9.8e-10 67.8 145 28.3
Dinv01422 Davidia involucrata HOM05D008396 ORTHO05D000898 1.3e-09 67.4 102 36.3
FAN14G0448 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.3e-09 67.4 138 28.3
FvH4_4g07721 Fragaria vesca HOM05D004096 ORTHO05D010213 1.7e-09 67.0 139 28.1
FAN05G5253 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.7e-09 67.0 138 28.3
FAN16G1984 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.7e-09 67.0 138 28.3
Hma1.2p1_0359F.1_g135000 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 1.7e-09 67.0 153 30.7
FAN02G3705 Fragaria x ananassa HOM05D010142 ORTHO05D012232 2.2e-09 66.6 135 28.1
FAN09G4807 Fragaria x ananassa HOM05D004096 ORTHO05D029602 2.2e-09 66.6 153 29.4
FAN17G2488 Fragaria x ananassa HOM05D004096 ORTHO05D010213 4.9e-09 65.5 137 27.0
FAN22G1171 Fragaria x ananassa HOM05D010142 ORTHO05D012232 4.9e-09 65.5 135 28.1
Medtr4g040020 Medicago truncatula HOM05D009725 ORTHO05D007788 6.4e-09 65.1 141 31.9
FAN05G1459 Fragaria x ananassa HOM05D010142 ORTHO05D012232 8.3e-09 64.7 135 28.1
FAN23G0071 Fragaria x ananassa HOM05D010142 ORTHO05D012232 8.3e-09 64.7 138 27.5
Dinv01242 Davidia involucrata HOM05D010363 ORTHO05D008693 1.1e-08 64.3 140 28.6
FvH4_1g23642 Fragaria vesca HOM05D017852 ORTHO05D010823 1.1e-08 64.3 68 42.6
RcHm_v2.0_Chr4g0396211 Rosa chinensis HOM05D009478 ORTHO05D010213 1.1e-08 64.3 145 29.0
RcHm_v2.0_Chr1g0345471 Rosa chinensis HOM05D004096 ORTHO05D010823 1.4e-08 63.9 98 33.7
Dinv07106 Davidia involucrata HOM05D008396 ORTHO05D000898 1.9e-08 63.5 138 31.2
FvH4_2g27931 Fragaria vesca HOM05D004096 ORTHO05D029602 1.9e-08 63.5 147 27.2
FAN01G2101 Fragaria x ananassa HOM05D009478 ORTHO05D010213 1.9e-08 63.5 153 29.4
Medtr2g022080 Medicago truncatula HOM05D009725 ORTHO05D007788 1.9e-08 63.5 133 29.3
Medtr5g022270 Medicago truncatula HOM05D009725 ORTHO05D007788 1.9e-08 63.5 133 29.3
CANSAT64G0311 Cannabis sativa HOM05D009769 ORTHO05D010823 2.4e-08 63.2 145 27.6
Ciclev10031514m.g Citrus clementina HOM05D002639 ORTHO05D010823 4.1e-08 62.4 142 25.4
FAN23G2567 Fragaria x ananassa HOM05D009478 ORTHO05D010213 4.1e-08 62.4 152 28.9
Ciclev10020105m.g Citrus clementina HOM05D002639 ORTHO05D010823 5.4e-08 62.0 137 25.5
FAN16G0074 Fragaria x ananassa HOM05D007993 ORTHO05D000898 5.4e-08 62.0 147 29.3
FAN25G0749 Fragaria x ananassa HOM05D010969 ORTHO05D010213 7.0e-08 61.6 152 29.6
Medtr4g007830 Medicago truncatula HOM05D011457 ORTHO05D007788 7.0e-08 61.6 156 29.5
CANSAT25G3518 Cannabis sativa HOM05D009769 ORTHO05D010823 9.2e-08 61.2 149 28.9
FvH4_7g10251 Fragaria vesca HOM05D004096 ORTHO05D029602 9.2e-08 61.2 150 28.0
Medtr8g089760 Medicago truncatula HOM05D011457 ORTHO05D007788 9.2e-08 61.2 156 28.8
CANSAT21G2496 Cannabis sativa HOM05D009769 ORTHO05D010823 1.6e-07 60.5 149 28.9
FAN24G2093 Fragaria x ananassa HOM05D004096 ORTHO05D029602 1.6e-07 60.5 150 28.0
Thecc.04G055800 Theobroma cacao HOM05D008451 ORTHO05D009908 1.6e-07 60.5 133 23.3
arahy.Tifrunner.gnm1.ann1.WWA99J Arachis hypogaea HOM05D008607 ORTHO05D010784 2.0e-07 60.1 163 26.4
RcHm_v2.0_Chr6g0268131 Rosa chinensis HOM05D010142 ORTHO05D012232 2.0e-07 60.1 139 28.1
FAN05G4774 Fragaria x ananassa HOM05D010142 ORTHO05D012232 3.5e-07 59.3 138 28.3
FvH4_2g27910 Fragaria vesca HOM05D004096 ORTHO05D025475 4.6e-07 58.9 149 26.8
FAN14G2992 Fragaria x ananassa HOM05D004096 ORTHO05D010213 7.8e-07 58.2 138 29.0
FAN14G0071 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.0e-06 57.8 150 28.7
FAN25G1002 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.0e-06 57.8 149 30.9
FAN28G1208 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.0e-06 57.8 100 37.0
FAN28G1618 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.0e-06 57.8 150 28.7
COL.COLO4_15720 Corchorus olitorius HOM05D056761 ORTHO05D009908 1.3e-06 57.4 156 25.6
FAN03G2350 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.3e-06 57.4 147 27.9
FAN04G1460 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.3e-06 57.4 100 37.0
Lj2g0027504 Lotus japonicus HOM05D009725 ORTHO05D007788 1.7e-06 57.0 147 27.9
RcHm_v2.0_Chr7g0189601 Rosa chinensis HOM05D010142 ORTHO05D012232 3.0e-06 56.2 126 30.2
arahy.Tifrunner.gnm1.ann1.CQ2DU1 Arachis hypogaea HOM05D008607 ORTHO05D010784 6.6e-06 55.1 150 23.3
FAN17G2733 Fragaria x ananassa HOM05D004096 ORTHO05D010213 6.6e-06 55.1 138 28.3
FAN19G1351 Fragaria x ananassa HOM05D007993 ORTHO05D000898 6.6e-06 55.1 134 28.4
FAN26G1459 Fragaria x ananassa HOM05D007993 ORTHO05D012371 6.6e-06 55.1 104 33.7
FAN28G1999 Fragaria x ananassa HOM05D004096 ORTHO05D010213 6.6e-06 55.1 135 26.7
FAN07G1300 Fragaria x ananassa HOM05D007993 ORTHO05D000898 8.6e-06 54.7 134 28.4


User provided reference genes

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