Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 0.0e+00 1137.5 562 100.0
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 6.8e-267 923.7 562 82.6
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 1.4e-227 793.1 558 72.8
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 7.6e-226 787.3 555 72.8
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.2e-223 780.0 558 72.6
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 5.6e-221 771.2 558 72.2
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 6.9e-219 764.2 554 71.1
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 2.2e-196 689.5 547 66.2
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 4.1e-195 685.3 549 64.7
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 3.4e-194 682.2 482 68.7
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 7.7e-194 681.0 551 63.5
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 1.7e-193 679.9 553 63.5
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 7.2e-192 674.5 536 64.2
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 1.4e-190 670.2 552 62.7
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 1.4e-190 670.2 551 62.6
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 5.1e-190 668.3 522 64.6
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 9.7e-189 664.1 509 64.0
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 9.7e-189 664.1 532 62.0
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 1.3e-188 663.7 510 64.9
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 3.7e-188 662.1 516 64.1
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 2.4e-187 659.4 544 61.2
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 5.3e-187 658.3 420 74.8
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 6.9e-187 657.9 538 61.5
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 1.0e-185 654.1 539 62.5
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 1.3e-185 653.7 532 64.1
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 1.7e-185 653.3 543 61.1
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 4.2e-184 648.7 508 62.6
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 3.9e-182 642.1 512 62.3
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 4.4e-181 638.6 497 64.6
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 9.7e-181 637.5 529 61.6
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 3.7e-180 635.6 560 60.5
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 2.4e-179 632.9 504 63.3
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 1.1e-176 624.0 524 60.5
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 4.2e-176 622.1 563 59.0
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 1.2e-175 620.5 496 63.3
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 6.1e-175 618.2 539 59.2
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 3.0e-174 615.9 428 67.8
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 3.0e-174 615.9 440 68.9
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 2.0e-173 613.2 447 65.5
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 3.3e-173 612.5 516 59.1
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 3.1e-171 605.9 431 66.4
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 7.0e-171 604.7 539 58.6
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 1.2e-170 604.0 509 59.7
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 1.6e-170 603.6 431 65.9
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 2.2e-169 599.7 542 56.6
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 3.8e-169 599.0 528 57.4
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 7.2e-168 594.7 548 55.5
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 4.7e-167 592.0 525 57.5
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 1.0e-166 590.9 486 59.9
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 6.8e-166 588.2 538 55.8
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 6.8e-166 588.2 528 56.8
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 5.7e-165 585.1 486 59.5
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 1.3e-164 583.9 542 57.0
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 1.7e-164 583.6 510 57.3
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 1.1e-163 580.9 524 56.5
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 1.4e-163 580.5 516 55.8
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 3.1e-163 579.3 431 62.9
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 5.4e-163 578.6 486 59.5
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 9.1e-163 577.8 516 55.8
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 1.6e-162 577.0 506 57.7
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 3.5e-162 575.9 484 59.7
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 1.0e-161 574.3 509 58.0
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 6.5e-161 571.6 488 59.4
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 1.1e-160 570.9 422 64.0
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 1.1e-160 570.9 486 59.3
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 2.5e-160 569.7 530 55.1
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 7.2e-160 568.2 486 57.8
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 1.6e-159 567.0 404 63.4
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 3.6e-159 565.8 394 68.5
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 4.7e-159 565.5 502 58.8
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 4.0e-158 562.4 533 52.9
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 9.8e-157 557.8 490 58.2
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 4.9e-156 555.4 492 58.1
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 6.3e-156 555.1 504 56.7
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 1.1e-155 554.3 517 53.8
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 3.1e-155 552.7 492 57.5
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 1.2e-154 550.8 514 54.3
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 6.6e-153 545.0 484 55.0
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 6.6e-153 545.0 466 59.0
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 1.1e-152 544.3 589 49.7
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 9.2e-139 498.0 478 52.7
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 9.5e-136 488.0 297 77.8
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 1.6e-135 487.3 353 60.3
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 1.4e-131 474.2 310 70.6
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 2.1e-130 470.3 290 74.8
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 4.3e-120 436.0 458 46.1
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 5.8e-117 425.6 384 51.3
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 3.2e-115 419.9 296 66.2
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 1.6e-114 417.5 581 45.8
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 3.5e-114 416.4 400 49.8
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 1.9e-112 410.6 334 56.0
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 5.8e-109 399.1 298 64.1
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 1.7e-108 397.5 285 64.2
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 5.6e-104 382.5 501 45.1
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 6.9e-102 375.6 265 70.6
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 1.9e-99 367.5 238 74.4
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 3.9e-97 359.8 229 73.8
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 6.2e-95 352.4 361 48.5
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 2.6e-93 347.1 361 47.1
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 3.4e-93 346.7 515 40.0
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 4.5e-93 346.3 215 71.2
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 2.1e-90 337.4 250 68.0
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 2.8e-79 300.4 234 64.5
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 2.6e-72 277.3 509 36.9
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.6e-66 258.1 166 71.1
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 1.5e-59 235.0 319 39.8
Lj4g0015969 Lotus japonicus HOM05D006592 ORTHO05D008122 3.0e-49 200.7 252 48.4
Glyma.16G106700 Glycine max HOM05D006592 ORTHO05D008122 5.2e-49 199.9 253 45.1
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 8.3e-47 192.6 323 34.4
Cpa.g.sc137.28 Carica papaya HOM05D006592 ORTHO05D008122 2.0e-45 188.0 220 49.5
Psat4g134920 Pisum sativum HOM05D006592 ORTHO05D008122 1.1e-43 182.2 240 41.7
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 1.8e-41 174.9 103 80.6
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 4.0e-41 173.7 487 27.9
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 4.1e-38 163.7 404 30.2
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 5.6e-35 153.3 104 71.2
Sc01g0005990 Simmondsia chinensis HOM05D006592 ORTHO05D008122 2.1e-34 151.4 248 40.3
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 7.0e-30 136.3 91 72.5
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 3.9e-28 130.6 323 31.6
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 5.0e-28 130.2 144 44.4
Ciclev10004057m.g Citrus clementina HOM05D006592 ORTHO05D008122 5.4e-22 110.2 98 57.1
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 1.3e-15 89.0 63 61.9
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 2.2e-15 88.2 66 68.2
Hma1.2p1_1046F.1_g251530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-11 73.9 46 71.7
C08p16710 Brassica napus HOM05D006592 ORTHO05D008122 3.1e-09 67.8 35 68.6
SEGI_04489 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 9.9e-08 62.8 45 64.4


User provided reference genes

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